>emb|AL160275.14| Human DNA sequence from clone RP11-402G3 on chromosome 9 Contains the
ATP6V1G1 gene for ATPase, H+ transporting, lysosomal 13kDa,
V1 subunit G isoform 1 (ATP6G, ATP6GL), a novel gene
(DKFZp547P234), a novel gene, a pseudogene similar to part
of ribosomal protein L7 (RPL7), a pseudogene similar to
part of ARP3 actin-related protein 3 homolog (yeast)
(ACTR3) and three CpG islands, complete sequence
Length = 189709
Score = 36.2 bits (18), Expect = 7.7
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 30 aaaaaaggcctgatcatggaagggag 55
|||||| ||||| |||||||||||||
Sbjct: 135958 aaaaaaagcctgttcatggaagggag 135933
>emb|BX927385.15| Zebrafish DNA sequence from clone DKEY-76P7 in linkage group 10,
complete sequence
Length = 243665
Score = 36.2 bits (18), Expect = 7.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 21 ttttttgtcaaaaaaggc 38
||||||||||||||||||
Sbjct: 8249 ttttttgtcaaaaaaggc 8232
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 425,082
Number of Sequences: 3902068
Number of extensions: 425082
Number of successful extensions: 114480
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114465
Number of HSP's gapped (non-prelim): 15
length of query: 55
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 35
effective length of database: 17,155,003,908
effective search space: 600425136780
effective search space used: 600425136780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)