Clone Name | rbastl46g01 |
---|---|
Clone Library Name | barley_pub |
>CSH1_YEAST (P38287) Mannosyl phosphorylinositol ceramide synthase CSH1 (EC| 2.-.-.-) (CSG1/SUR1 homolog 1) Length = 376 Score = 29.3 bits (64), Expect = 5.6 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -1 Query: 301 H*GNTGWLQVLNNHVFFLCLLGFIFSFII 215 H G+ +++ L NH+ + GFIF F I Sbjct: 260 HTGDANFMKTLENHILSCVVTGFIFGFFI 288
>VL1_BPV3 (P50805) Major capsid protein L1| Length = 510 Score = 28.9 bits (63), Expect = 7.3 Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 6/103 (5%) Frame = -3 Query: 359 DSYTSPSFKVYLHHCGVGLPLRQHWMASSFEQSCILSLPFRVYIFFH---YRCVELYRFL 189 D+YT+ FK YL H + W S Q CI+ L + R +E + Sbjct: 358 DTYTAAEFKHYLRHV-------EEWEVSLVLQLCIVDLTPEALAHINGMDPRIIESWNLG 410 Query: 188 ILSVIT*EEKLAGYM---AVH*LPPSDVNALEDTYQMDNLWNV 69 + E Y+ A P D A ED Y W+V Sbjct: 411 FIHAPNNIEDQYRYLQSIATRCPPKEDAAATEDPYAKYTFWDV 453
>ABD1_YEAST (P32783) mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56)| Length = 436 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 413 SPMI*TGSMDSCKKYNWIDSYTSPSFKVYLHHCGVGLPLRQHWMA 279 SP+I + ++ KY ID YT P V CG G LR++ A Sbjct: 141 SPIIKLRNFNNAIKYMLIDKYTKPGDVVLELGCGKGGDLRKYGAA 185
>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1262 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 356 SYTSPSFKVYLHHCGVGLPLRQHWMAS-SFEQSCILSLPFRVYIFFHYRCVELY 198 +Y + + V+L C V + + H + SF SC L L V+I Y CV+L+ Sbjct: 764 AYVACASLVFLFICFVQITIVPHSLFMLSFYLSCFLLLALVVFISVIYACVKLF 817
>ZN513_HUMAN (Q8N8E2) Zinc finger protein 513| Length = 479 Score = 28.5 bits (62), Expect = 9.6 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%) Frame = +2 Query: 83 CPFGMYPPMHL--HQKVATNGQPYNLPISXXXXXXXXXXXXXXXHSDN-ERKYKP*KAKK 253 CPF + P HL H K + +P+ H DN +R + +K Sbjct: 303 CPFATHYPNHLARHMKTHSGEKPFRC----------ARCPYASAHLDNLKRHQRVHTGEK 352 Query: 254 EYMIVQNLKPSSVASMANLHRSGE----DTL*RMGLCNY 358 Y L P + ++ANL R G D R LCNY Sbjct: 353 PYKC--PLCPYACGNLANLKRHGRIHSGDKPFRCSLCNY 389
>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1264 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 356 SYTSPSFKVYLHHCGVGLPLRQHWMAS-SFEQSCILSLPFRVYIFFHYRCVELY 198 +Y + + V+L C V + + H M SF +C L L V++ Y CV+L+ Sbjct: 766 AYVACASLVFLFICCVQITIVPHSMFMLSFYLACFLLLTLVVFVSMIYSCVKLF 819 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,288,441 Number of Sequences: 219361 Number of extensions: 1374739 Number of successful extensions: 3395 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3266 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3394 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)