>SIA8E_PANTR (P61646) Alpha-2,8-sialyltransferase 8E (EC 2.4.99.-) (ST8Sia V)|
          Length = 376

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
 Frame = +2

Query: 77  FSK*RSLQVCKTRQSIGRAKD*KNT--RNCYQFKYVFSTKQCTPGSTNL---IHHN*RFV 241
           F + +SLQ+CK   +I  A   K+T  R C    ++F+T++ TP  T L   +  +  + 
Sbjct: 82  FDRWKSLQMCKWAMNISEANQFKSTLSRCCNAPAFLFTTQKNTPLGTKLKYEVDTSGIYH 141

Query: 242 QNEHMFHNHNQTPPK-----STCAHARHG-------------NASFIFGLFIRPQHNEQT 367
            N+ +F    +  P        CA   +G             +A F+F   + P   + T
Sbjct: 142 INQEIFRMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYT 201

Query: 368 LDVHGGTNKTAMPPS 412
           +DV   T+   + PS
Sbjct: 202 MDVGVKTDVVTVNPS 216

>SIA8E_HUMAN (O15466) Alpha-2,8-sialyltransferase 8E (EC 2.4.99.-) (ST8Sia V)|
          Length = 376

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
 Frame = +2

Query: 77  FSK*RSLQVCKTRQSIGRAKD*KNT--RNCYQFKYVFSTKQCTPGSTNL---IHHN*RFV 241
           F + +SLQ+CK   +I  A   K+T  R C    ++F+T++ TP  T L   +  +  + 
Sbjct: 82  FDRWKSLQMCKWAMNISEANQFKSTLSRCCNAPAFLFTTQKNTPLGTKLKYEVDTSGIYH 141

Query: 242 QNEHMFHNHNQTPPK-----STCAHARHG-------------NASFIFGLFIRPQHNEQT 367
            N+ +F    +  P        CA   +G             +A F+F   + P   + T
Sbjct: 142 INQEIFRMFPKDMPYYRSQFKKCAVVGNGGILKNSRCGREINSADFVFRCNLPPISEKYT 201

Query: 368 LDVHGGTNKTAMPPS 412
           +DV   T+   + PS
Sbjct: 202 MDVGVKTDVVTVNPS 216

>SIA8E_MOUSE (P70126) Alpha-2,8-sialyltransferase 8E (EC 2.4.99.-) (ST8Sia V)|
          Length = 412

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +2

Query: 77  FSK*RSLQVCKTRQSIGRAKD*KNT--RNCYQFKYVFSTKQCTPGSTNLIHHN*RFVQNE 250
           F + +SLQ+CK       A   K+T  R C    ++F+T++ TP  TNL +     V++ 
Sbjct: 118 FERWKSLQICKWAMGASEASLFKSTLSRCCNAPNFLFTTQKNTPVETNLRYE----VESS 173

Query: 251 HMFH 262
            ++H
Sbjct: 174 GLYH 177

>CDK7_MOUSE (Q03147) Cell division protein kinase 7 (EC 2.7.11.22) (EC|
           2.7.11.23) (CDK-activating kinase) (CAK) (TFIIH basal
           transcription factor complex kinase subunit) (39 kDa
           protein kinase) (P39 Mo15) (Protein-tyrosine kinase
           MPK-7) (CR4 protein kinas
          Length = 346

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
 Frame = +3

Query: 231 EDLFKMNTCFITT------TKLPPSRPAPTPGMEMP 320
           + LF  N C  TT      TK   +RP PTPG ++P
Sbjct: 273 QGLFLFNPCTRTTASQALKTKYFSNRPGPTPGCQLP 308

>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6|
          Length = 737

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 236 FVQNEHMFHNHNQTPPKSTCAHARHGNASFIFGLFIRPQHNEQTLD 373
           F+     F N   TP K  C  ARH   S   G  +RP  ++ TLD
Sbjct: 329 FLPANFSFKNPASTPTKLVCIRARH---SLSTGAVLRPLLHKYTLD 371

>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 466

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +3

Query: 108 KPGSRLVEQKIKKILEIATSSNMFLAQSNVHQALPI*STTTEDLFKMNTCFITTTKLPPS 287
           +P S + E+K + +LE     +    +S+      I  T  EDL   +   +T+  LPPS
Sbjct: 205 EPVSEIQEEKPEPVLEETAPEDA--QKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPS 262

Query: 288 RPAPTPGM 311
              P  G+
Sbjct: 263 GAVPVTGI 270

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -2

Query: 420  FDLDGGMAVLL--VPPWTSRVCSLCCGLMNKPKIKL-AFPCLAWAQVDLGG 277
            FD D   A+ +  V PWT  V   C G M+   I + +   LA A   LGG
Sbjct: 920  FDFDSSQAIPIEQVEPWTEIVRRFCTGAMSYGSISMESHSSLAIAMNRLGG 970


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,326,854
Number of Sequences: 219361
Number of extensions: 1321370
Number of successful extensions: 3351
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3344
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)