ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl46f06 |
|---|---|
| Clone Library Name | barley_pub |
>NAC1_BOVIN (P48765) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 30.8 bits (68), Expect = 0.83 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + TR E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 705 EHTRLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742
>NAC1_HUMAN (P32418) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 973 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 708 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 745
>NAC1_MOUSE (P70414) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 705 EHTKLEVIIQESYEFKSTVDKLIKKTNLALVVGTNSWR 742
>NAC1_FELCA (P48767) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742
>NAC1_CAVPO (P48766) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742
>NAC1_CANFA (P23685) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 705 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 742
>NAC1_RAT (Q01728) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 971 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + T+ E I +SY+ K++ I+K NL+ + G+ WR Sbjct: 706 EHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWR 743
>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)| Length = 464 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = -3 Query: 165 TCQETQIEFSDLNLFAIFFLVAFDLNKLKPSFLFCIVGAGTMCTLLHLTKR 13 +C + + D+ A F ++ + L P F+F ++G GT+C +++ T R Sbjct: 87 SCDDYDLLSEDMWSSAYFKIIVYML--YIPIFIFALIGNGTVCYIVYSTPR 135
>NAC2_RAT (P48768) Sodium/calcium exchanger 2 precursor| (Na(+)/Ca(2+)-exchange protein 2) Length = 921 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + R E I +SY KN+ I+K NL+ + G+ WR Sbjct: 655 ENCRLEVIIEESYDFKNTVDKLIKKTNLALVIGTHSWR 692
>NAC2_HUMAN (Q9UPR5) Sodium/calcium exchanger 2 precursor| (Na(+)/Ca(2+)-exchange protein 2) Length = 921 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +1 Query: 67 QKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKPWR 180 + R E I +SY KN+ I+K NL+ + G+ WR Sbjct: 655 ENCRLEVIIEESYDFKNTVDKLIKKTNLALVIGTHSWR 692
>PT1_MYCPN (P75168) Phosphoenolpyruvate-protein phosphotransferase (EC| 2.7.3.9) (Phosphotransferase system, enzyme I) Length = 572 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 73 TRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKP 174 T F +Q K +QE+ + + +R+ L++LTG KP Sbjct: 114 TMFSQMQDKYFQERAADILDLRQRLLAYLTGQKP 147
>FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1 (EC| 2.7.1.150) (Phosphatidylinositol-3-phosphate 5-kinase) (Type III PIP kinase) Length = 2278 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/67 (28%), Positives = 31/67 (46%) Frame = +1 Query: 124 QIQIRKLNLSFLTGSKPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCMLLLISTCS 303 +++I L L F S+ W +S S+S+ L G S S + ++ST + Sbjct: 1159 EMEIENLELEFQKRSRQWEVSY-----SSSQNLLGTG-------SHQSITVLYSMVSTKT 1206 Query: 304 GSPCVHP 324 +PCV P Sbjct: 1207 ATPCVGP 1213
>PRPF3_MOUSE (Q922U1) U4/U6 small nuclear ribonucleoprotein Prp3| (Pre-mRNA-splicing factor 3) Length = 683 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 31 ECAHGPRSHNAKQKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKP 174 E GP S + T+ +QIK E ++QI+ RK LSF++ P Sbjct: 124 EVIPGPPSESPGMLTK---LQIKQMMEAATRQIEERKKQLSFISPPAP 168
>PRPF3_HUMAN (O43395) U4/U6 small nuclear ribonucleoprotein Prp3| (Pre-mRNA-splicing factor 3) (U4/U6 snRNP 90 kDa protein) (hPrp3) Length = 683 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 31 ECAHGPRSHNAKQKTRFEFIQIKSYQEKNSKQIQIRKLNLSFLTGSKP 174 E GP S + T+ +QIK E ++QI+ RK LSF++ P Sbjct: 124 EVIPGPPSESPGMLTK---LQIKQMMEAATRQIEERKKQLSFISPPTP 168
>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)| (Protein kinase 18) Length = 982 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/70 (24%), Positives = 33/70 (47%) Frame = +1 Query: 100 SYQEKNSKQIQIRKLNLSFLTGSKPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCM 279 +Y +KN + + I+K+N S + W +++ K+ S + ++ C T C Sbjct: 47 AYDKKNEQTVAIKKMNFSGKQAVEKW--NDILKEVSFLNTVVHPHIVDYKACFLKDTTCW 104 Query: 280 LLLISTCSGS 309 L++ C GS Sbjct: 105 LVM-EYCIGS 113
>VGLM_PHV (P27315) Envelope polyprotein precursor (M polyprotein) [Contains:| Glycoprotein G1; Glycoprotein G2] Length = 1142 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 375 SMMEGLAHSPVCRLEVMGVHAW 310 S+M G+AHS L V G+H W Sbjct: 467 SLMPGIAHSLAVELCVPGIHGW 488
>CP17A_CAVPO (Q64410) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +1 Query: 148 LSFLTGSKPWRISNLWKKTSASKLLFPNGVLQNLMCSDMSTVCMLLLISTCSG 306 ++F S W++ +S S L+N++C ++S +C L +TC G Sbjct: 112 IAFADSSATWQLHRRLVLSSFSLFRDGEQKLENIICQELSALCDFL--ATCDG 162
>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)| Length = 1738 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +1 Query: 58 NAKQKTRFEFIQIKSYQEKNSKQ 126 N+K KT+ EF KS +KN+KQ Sbjct: 1271 NSKNKTKTEFFLNKSSSQKNNKQ 1293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,061,177 Number of Sequences: 219361 Number of extensions: 1010787 Number of successful extensions: 2296 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2295 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
