>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA
          Length = 3214

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 295  acctgctcaggctcaccatgcgtgcacccccatcacctc 333
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2923

>ref|XM_476451.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3207

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 295  acctgctcaggctcaccatgcgtgcacccccatcacctc 333
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2954 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2916

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 295     acctgctcaggctcaccatgcgtgcacccccatcacctc 333
               ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 1277464 acctgttcaggctcaccatgcgtgcaccaccatcacctc 1277426

>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 295   acctgctcaggctcaccatgcgtgcacccccatcacctc 333
             ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 42299 acctgttcaggctcaccatgcgtgcaccaccatcacctc 42261

>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full
            insert sequence
          Length = 3206

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 295  acctgctcaggctcaccatgcgtgcacccccatcacctc 333
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2953 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2915

>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full
            insert sequence
          Length = 3214

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 295  acctgctcaggctcaccatgcgtgcacccccatcacctc 333
            ||||| |||||||||||||||||||||| ||||||||||
Sbjct: 2961 acctgttcaggctcaccatgcgtgcaccaccatcacctc 2923

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 296     cctgctcaggctcaccatgcgtgcacccccatcacctc 333
               |||| |||||||||||||||||||||| ||||||||||
Sbjct: 1222713 cctgttcaggctcaccatgcgtgcaccgccatcacctc 1222676

>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 296   cctgctcaggctcaccatgcgtgcacccccatcacctc 333
             |||| |||||||||||||||||||||| ||||||||||
Sbjct: 53804 cctgttcaggctcaccatgcgtgcaccgccatcacctc 53767

>gb|BT018635.1| Zea mays clone EL01N0504B06.d mRNA sequence
          Length = 1657

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 296  cctgctcaggctcaccatgcgtgcacccccatcacc 331
            |||| ||||| |||||||||||||||| ||||||||
Sbjct: 1385 cctgttcaggttcaccatgcgtgcaccaccatcacc 1350

>gb|AY109680.1| Zea mays CL17699_1 mRNA sequence
          Length = 1483

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 296  cctgctcaggctcaccatgcgtgcacccccatcacc 331
            |||| ||||| |||||||||||||||| ||||||||
Sbjct: 1190 cctgttcaggttcaccatgcgtgcaccaccatcacc 1155

>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 124    cagattcagatcagaaaactcaattt 149
              |||| |||||||||||||||||||||
Sbjct: 105581 cagaatcagatcagaaaactcaattt 105606

>ref|NM_131386.1| Danio rerio DNA (cytosine-5-)-methyltransferase 3 (dnmt3), mRNA
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 124  cagattcagatcagaaaactcaattt 149
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

>dbj|AB196914.1| Danio rerio dnmt3 mRNA for DNA methyltransferase, complete cds
          Length = 4882

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 124  cagattcagatcagaaaactcaattt 149
            |||| |||||||||||||||||||||
Sbjct: 1225 cagaatcagatcagaaaactcaattt 1200

>emb|AL627127.20| Mouse DNA sequence from clone RP23-360O1 on chromosome 4, complete
              sequence
          Length = 188629

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 17     tttgtcaaatgtaggagtgtgc 38
              ||||||||||||||||||||||
Sbjct: 105001 tttgtcaaatgtaggagtgtgc 104980

>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 284   ttctaatctctacctgctcaggctc 308
             ||||| |||||||||||||||||||
Sbjct: 72913 ttctattctctacctgctcaggctc 72937

>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 284    ttctaatctctacctgctcaggctc 308
              ||||| |||||||||||||||||||
Sbjct: 193207 ttctattctctacctgctcaggctc 193183

>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence
          Length = 108164

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   cagaaaactcaatttgagttt 155
             |||||||||||||||||||||
Sbjct: 65393 cagaaaactcaatttgagttt 65373

>gb|AC027333.5| Homo sapiens chromosome 5 clone CTD-2194F12, complete sequence
          Length = 180529

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   tttctaatttatggaagaaaa 202
             |||||||||||||||||||||
Sbjct: 91889 tttctaatttatggaagaaaa 91909

>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 186    taatttatggaagaaaactag 206
              |||||||||||||||||||||
Sbjct: 202315 taatttatggaagaaaactag 202295

>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    tttctaatttatggaagaaaa 202
              |||||||||||||||||||||
Sbjct: 160361 tttctaatttatggaagaaaa 160381

>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete
             sequence
          Length = 206234

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   atttgagtttcctgacaggt 165
             ||||||||||||||||||||
Sbjct: 44931 atttgagtttcctgacaggt 44912

>gb|AC116657.3| Mus musculus BAC clone RP23-289E18 from 15, complete sequence
          Length = 184557

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gaaaactcaatttgagtttc 156
             ||||||||||||||||||||
Sbjct: 23022 gaaaactcaatttgagtttc 23003

>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence
          Length = 222810

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 175    tggaggatttctaatttatggaagaaaa 202
              ||||||||||||||||||  ||||||||
Sbjct: 154073 tggaggatttctaatttacagaagaaaa 154046

>emb|AL096712.20|HSJ744I24 Human DNA sequence from clone RP4-744I24 on chromosome 6p12.1-21.2
              Contains the 3' end of the TBC1D22B gene for TBC1 domain
              family member 22B, the RNF8 gene for ring finger protein
              (C3HC4 type) 8 (KIAA0646) and a CpG island, complete
              sequence
          Length = 120515

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttttgtcaaatgtaggagtg 35
              ||||||||||||||||||||
Sbjct: 101554 ttttgtcaaatgtaggagtg 101535

>emb|CR545467.4| Zebrafish DNA sequence from clone CH211-196P10 in linkage group 16,
              complete sequence
          Length = 161708

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    ttctaatctctacctgctca 303
              ||||||||||||||||||||
Sbjct: 114488 ttctaatctctacctgctca 114507

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     tttttcctaatggagtgctt 240
               ||||||||||||||||||||
Sbjct: 1591956 tttttcctaatggagtgctt 1591937

>gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, complete sequence
          Length = 174287

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   atcagaaaactcaatttgag 152
             ||||||||||||||||||||
Sbjct: 99453 atcagaaaactcaatttgag 99434

>gb|AC090257.5| Homo sapiens chromosome 15, clone RP11-301A18, complete sequence
          Length = 159299

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaacctttttgtcaaatgta 29
             ||||||||||||||||||||
Sbjct: 35717 aaacctttttgtcaaatgta 35736

>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaacctttttgtcaaatgta 29
              ||||||||||||||||||||
Sbjct: 155125 aaacctttttgtcaaatgta 155144

>gb|AC021541.7| Homo sapiens chromosome 15, clone RP11-505L16, complete sequence
          Length = 194023

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    atcagaaaactcaatttgag 152
              ||||||||||||||||||||
Sbjct: 169250 atcagaaaactcaatttgag 169269

>gb|AC154841.2| Mus musculus BAC clone RP23-61I24 from chromosome 14, complete sequence
          Length = 211666

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     caatgcaaaacagaaaactc 76
              ||||||||||||||||||||
Sbjct: 144227 caatgcaaaacagaaaactc 144208

>gb|AC018787.5|AC018787 Homo sapiens, clone RP11-22O12, complete sequence
          Length = 90722

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaacctttttgtcaaatgta 29
             ||||||||||||||||||||
Sbjct: 41736 aaacctttttgtcaaatgta 41755

>gb|AC150560.5| Mus musculus BAC clone RP23-16I14 from 15, complete sequence
          Length = 208801

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    atttgagtttcctgacaggt 165
              ||||||||||||||||||||
Sbjct: 149367 atttgagtttcctgacaggt 149348

>emb|CR848841.19| Zebrafish DNA sequence from clone DKEY-202I12 in linkage group 16,
              complete sequence
          Length = 205755

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    ttctaatctctacctgctca 303
              ||||||||||||||||||||
Sbjct: 156039 ttctaatctctacctgctca 156058


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,679,671
Number of Sequences: 3902068
Number of extensions: 3679671
Number of successful extensions: 67649
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67546
Number of HSP's gapped (non-prelim): 103
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)