>FBX15_MACFA (Q9GKV7) F-box only protein 15|
          Length = 434

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +1

Query: 1   ERKGKKPSIELIDGAMGRELVTGVVYGSTGPCPGKIRLSSL--PAPVRWERQQHPAGCRR 174
           E+ GK+  +E +D ++    VT + YG   PC   +    L    PV  +  + P   R 
Sbjct: 128 EKSGKEYIMEHVDLSVNDTSVTVIWYGKNWPCLASLSTLDLCGVTPVFMDWYKTPTKHRL 187

Query: 175 RW 180
           RW
Sbjct: 188 RW 189

>Y924_THET8 (Q56419) UPF0103 protein TTHA0924|
          Length = 326

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 80  PYTTPVTSSLPIAPSINSIDGFLPF 6
           P+ TP   +LP  P++ ++D  LPF
Sbjct: 146 PFQTPFGPALPDLPALQALDALLPF 170

>VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein]
          Length = 621

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
 Frame = -3

Query: 191 RHLVQRRR----QPAGCCCRSQRTGAGNDDSRIFPG-----------HGPVDPYTTPVTS 57
           R L +RRR     P G      R+G G+DD   +PG           H P  P+  P  +
Sbjct: 435 RPLAKRRRYNWDHPRG------RSGGGDDDEAYYPGEGAPAELPPHHHSPPPPHPPPSHA 488

Query: 56  SLPIAPSINSI 24
              +A +++S+
Sbjct: 489 LSKLASAVSSL 499


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,316,155
Number of Sequences: 219361
Number of extensions: 559963
Number of successful extensions: 1677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)