ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY851013.1| Drosophila ezoana strain 15010-0971.2 knirps (kni... 50 0.004
2ref|XM_450043.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.24
3ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative... 44 0.24
4gb|AF000410.1| Plasmodium berghei strain NK65 merozoite surface ... 44 0.24
5gb|U43521.1|PBU43521 Plasmodium berghei merozoite surface protei... 44 0.24
6ref|XM_673413.1| Plasmodium berghei strain ANKA merozoite surfac... 44 0.24
7gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 44 0.24
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
10dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.24
11gb|AF187232.1|AF187232 Plasmodium berghei merozoite surface anti... 44 0.24
12dbj|AK059055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.24
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.24
14gb|AY851012.1| Drosophila americana strain G96.48 knirps (kni) g... 42 0.95
15gb|AY851011.1| Drosophila americana strain G96.47 knirps (kni) g... 42 0.95
16gb|AY851010.1| Drosophila americana strain G96.45 knirps (kni) g... 42 0.95
17gb|AY851009.1| Drosophila americana strain G96.31 knirps (kni) g... 42 0.95
18gb|AY851008.1| Drosophila americana strain G96.11 knirps (kni) g... 42 0.95
19gb|AY851007.1| Drosophila virilis strain A11 knirps (kni) gene, ... 42 0.95
20ref|XM_641105.1| Dictyostelium discoideum PAK sub-family kinase ... 42 0.95
21ref|XM_466803.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.95
22gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 42 0.95
23gb|AC084047.3| Trypanosoma brucei chromosome 6 clone RPCI93-5F5,... 42 0.95
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 0.95
25gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete... 42 0.95
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 0.95
27ref|XM_821762.1| Trypanosoma brucei TREU927 clone RPCI93-5F5 ESA... 42 0.95
28emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 0.95
29ref|NM_169822.1| Drosophila melanogaster fruitless CG14307-RD, t... 42 0.95
30gb|AF220179.1|AF220179 Drosophila melanogaster fruitless type-C ... 42 0.95
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.95
32dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.95
33dbj|AK120798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.95
34gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60... 42 0.95
35gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 0.95
36gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.95
37emb|AJ006944.2|TBR6944 Trypanosoma brucei brucei pie8 gene 42 0.95
38gb|L36177.1|DROKNIRP Drosophila virilis DNA-binding protein (kni... 42 0.95
39ref|XM_631404.1| Dictyostelium discoideum hypothetical protein (... 40 3.7
40gb|AF000409.1| Plasmodium berghei strain ANKA merozoite surface ... 40 3.7
41gb|U39852.1| Caenorhabditis elegans cosmid K10C2, complete sequence 40 3.7
42ref|XM_361721.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 3.7
43gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genom... 40 3.7
44gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete... 40 3.7
45gb|AC150308.1| Latimeria menadoensis clone VMRC4-24C12, complete... 40 3.7
46ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
47ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
48ref|XM_956737.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
49ref|XM_324621.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.7
50gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.7
51emb|AM051207.1| Cryptomonas lundii plastid partial rbcL gene for... 40 3.7
52emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in... 40 3.7
53gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosom... 40 3.7
54ref|NM_076682.2| Caenorhabditis elegans K10C2.4 (fumarylacetoace... 40 3.7
55dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
57gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, r... 40 3.7
58gb|AE004557.1| Pseudomonas aeruginosa PAO1, section 118 of 529 o... 40 3.7
59dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.7
60emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on ch... 40 3.7
61gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74... 40 3.7 
>gb|AY851013.1| Drosophila ezoana strain 15010-0971.2 knirps (kni) gene, partial
           cds
          Length = 1220

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||||||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgttgctgc 231
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>ref|XM_450043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 558

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 112 ctgtcgtcgttgccggcgccgg 133
           ||||||||||||||||||||||
Sbjct: 193 ctgtcgtcgttgccggcgccgg 214
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>ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative transcription factor
            (OSJNBa0076F20.5), mRNA
          Length = 3478

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 251  ctggaactggatcttgtactgcgttttgttgccg 284
            |||||||||||||| ||||||| | |||||||||
Sbjct: 2298 ctggaactggatctcgtactgcatcttgttgccg 2265
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>gb|AF000410.1| Plasmodium berghei strain NK65 merozoite surface protein-1 gene,
           partial cds
          Length = 407

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 216 tgctgttgatgctgattctggtgttgttgc 245
           |||||||| ||||| |||||||||||||||
Sbjct: 251 tgctgttgttgctgcttctggtgttgttgc 222



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 216 tgctgttgatgctgattctggtgttgttgc 245
           |||||||| ||||| |||||||||||||||
Sbjct: 212 tgctgttgttgctgcttctggtgttgttgc 183
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>gb|U43521.1|PBU43521 Plasmodium berghei merozoite surface protein-1 gene, complete cds
          Length = 5750

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 216  tgctgttgatgctgattctggtgttgttgc 245
            |||||||| ||||| |||||||||||||||
Sbjct: 2527 tgctgttgttgctgcttctggtgttgttgc 2498
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>ref|XM_673413.1| Plasmodium berghei strain ANKA merozoite surface protein 1, precursor
            (PB000172.01.0) partial mRNA
          Length = 4671

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 216  tgctgttgatgctgattctggtgttgttgc 245
            |||||||| ||||| |||||||||||||||
Sbjct: 1866 tgctgttgttgctgcttctggtgttgttgc 1837
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>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 251   ctggaactggatcttgtactgcgttttgttgccg 284
             |||||||||||||| ||||||| | |||||||||
Sbjct: 38889 ctggaactggatctcgtactgcatcttgttgccg 38922
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 251      ctggaactggatcttgtactgcgttttgttgccg 284
                |||||||||||||| ||||||| | |||||||||
Sbjct: 19411023 ctggaactggatctcgtactgcatcttgttgccg 19411056
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 112     ctgtcgtcgttgccggcgccgg 133
               ||||||||||||||||||||||
Sbjct: 1219482 ctgtcgtcgttgccggcgccgg 1219461
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>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0563F09
          Length = 174905

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   ctgtcgtcgttgccggcgccgg 133
             ||||||||||||||||||||||
Sbjct: 50356 ctgtcgtcgttgccggcgccgg 50335
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>gb|AF187232.1|AF187232 Plasmodium berghei merozoite surface antigen 1 gene, complete cds
          Length = 5376

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 216  tgctgttgatgctgattctggtgttgttgc 245
            |||||||| ||||| |||||||||||||||
Sbjct: 2400 tgctgttgttgctgcttctggtgttgttgc 2371
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>dbj|AK059055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F02, full
           insert sequence
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 251 ctggaactggatcttgtactgcgttttgttgccg 284
           |||||||||||||| ||||||| | |||||||||
Sbjct: 566 ctggaactggatctcgtactgcatcttgttgccg 533
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 251      ctggaactggatcttgtactgcgttttgttgccg 284
                |||||||||||||| ||||||| | |||||||||
Sbjct: 19422299 ctggaactggatctcgtactgcatcttgttgccg 19422332
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>gb|AY851012.1| Drosophila americana strain G96.48 knirps (kni) gene, partial cds
          Length = 1205

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||| ||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgctgctgc 231
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>gb|AY851011.1| Drosophila americana strain G96.47 knirps (kni) gene, partial cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||| ||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgctgctgc 231
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>gb|AY851010.1| Drosophila americana strain G96.45 knirps (kni) gene, partial cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||| ||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgctgctgc 231
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>gb|AY851009.1| Drosophila americana strain G96.31 knirps (kni) gene, partial cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||| ||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgctgctgc 231
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>gb|AY851008.1| Drosophila americana strain G96.11 knirps (kni) gene, partial cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| ||||| ||||||
Sbjct: 263 tgctgttgatgctgatgctgttgttgctgctgc 231
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>gb|AY851007.1| Drosophila virilis strain A11 knirps (kni) gene, partial cds
          Length = 1217

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||||||||||| ||| || |||||||||
Sbjct: 263 tgctgttgatgctgatgctgttgctgttgctgc 231
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>ref|XM_641105.1| Dictyostelium discoideum PAK sub-family kinase (DDB0229968), partial
            mRNA
          Length = 5037

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 219  tgttgatgctgattctggtgttgttgctg 247
            ||||| ||||||||||| |||||||||||
Sbjct: 2333 tgttgttgctgattctgttgttgttgctg 2305
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>ref|XM_466803.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1545

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 156 cccggcgggttgccgccgccg 176
           |||||||||||||||||||||
Sbjct: 245 cccggcgggttgccgccgccg 225
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 216    tgctgttgatgctgattctggtgttgttgctgc 248
              ||||| |||||||| | ||||||||||||||||
Sbjct: 851884 tgctgctgatgctgttcctggtgttgttgctgc 851852
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>gb|AC084047.3| Trypanosoma brucei chromosome 6 clone RPCI93-5F5, complete sequence
          Length = 152595

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 216   tgctgttgatgctgattctggtgttgttgctgc 248
             ||||| |||||||| | ||||||||||||||||
Sbjct: 61609 tgctgctgatgctgttcctggtgttgttgctgc 61577
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 156     cccggcgggttgccgccgccg 176
               |||||||||||||||||||||
Sbjct: 3102594 cccggcgggttgccgccgccg 3102614
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>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence
          Length = 171563

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 216   tgctgttgatgctgattctggtgttgttgctgc 248
             |||||||| ||||| | ||||||||||||||||
Sbjct: 97959 tgctgttgttgctgctcctggtgttgttgctgc 97991
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 156    cccggcgggttgccgccgccg 176
              |||||||||||||||||||||
Sbjct: 131175 cccggcgggttgccgccgccg 131155
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>ref|XM_821762.1| Trypanosoma brucei TREU927 clone RPCI93-5F5 ESAG8-associated
           protein (Tb927.6.2850) partial mRNA
          Length = 1683

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           ||||| |||||||| | ||||||||||||||||
Sbjct: 218 tgctgctgatgctgttcctggtgttgttgctgc 186
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 156     cccggcgggttgccgccgccg 176
               |||||||||||||||||||||
Sbjct: 3982765 cccggcgggttgccgccgccg 3982745
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>ref|NM_169822.1| Drosophila melanogaster fruitless CG14307-RD, transcript variant D
            (fru), mRNA
          Length = 2241

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 216  tgctgttgatgctgattctggtgttgttgctgc 248
            |||||||| ||||| | ||||||||||||||||
Sbjct: 1618 tgctgttgttgctgctcctggtgttgttgctgc 1586
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>gb|AF220179.1|AF220179 Drosophila melanogaster fruitless type-C (fru) mRNA, partial cds
          Length = 818

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 216 tgctgttgatgctgattctggtgttgttgctgc 248
           |||||||| ||||| | ||||||||||||||||
Sbjct: 185 tgctgttgttgctgctcctggtgttgttgctgc 153
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 156      cccggcgggttgccgccgccg 176
                |||||||||||||||||||||
Sbjct: 24752263 cccggcgggttgccgccgccg 24752283
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>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   cccggcgggttgccgccgccg 176
             |||||||||||||||||||||
Sbjct: 51911 cccggcgggttgccgccgccg 51931
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>dbj|AK120798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012G01, full
           insert sequence
          Length = 1604

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 156 cccggcgggttgccgccgccg 176
           |||||||||||||||||||||
Sbjct: 245 cccggcgggttgccgccgccg 225
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>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the
             complete sequence
          Length = 221164

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 216   tgctgttgatgctgattctggtgttgttgctgc 248
             |||||||| ||||| | ||||||||||||||||
Sbjct: 46457 tgctgttgttgctgctcctggtgttgttgctgc 46489
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 122     tgccggcgccggtgcgctggg 142
               |||||||||||||||||||||
Sbjct: 1870538 tgccggcgccggtgcgctggg 1870558
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 156     cccggcgggttgccgccgccg 176
               |||||||||||||||||||||
Sbjct: 3716457 cccggcgggttgccgccgccg 3716477
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>emb|AJ006944.2|TBR6944 Trypanosoma brucei brucei pie8 gene
          Length = 3278

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 216  tgctgttgatgctgattctggtgttgttgctgc 248
            ||||| |||||||| | ||||||||||||||||
Sbjct: 1149 tgctgctgatgctgttcctggtgttgttgctgc 1117
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>gb|L36177.1|DROKNIRP Drosophila virilis DNA-binding protein (knirps) gene exons 1-2,
            complete cds
          Length = 4969

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 216  tgctgttgatgctgattctggtgttgttgctgc 248
            |||||||||||||||| ||| || |||||||||
Sbjct: 3526 tgctgttgatgctgatgctgttgctgttgctgc 3494
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>ref|XM_631404.1| Dictyostelium discoideum hypothetical protein (DDB0219392), partial
           mRNA
          Length = 1410

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 tgttgatgctgattctggtg 238
           ||||||||||||||||||||
Sbjct: 213 tgttgatgctgattctggtg 194
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>gb|AF000409.1| Plasmodium berghei strain ANKA merozoite surface protein-1 gene,
           partial cds
          Length = 407

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 218 ctgttgatgctgattctggtgttgttgc 245
           |||||| ||||| |||||||||||||||
Sbjct: 210 ctgttgttgctgcttctggtgttgttgc 183
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>gb|U39852.1| Caenorhabditis elegans cosmid K10C2, complete sequence
          Length = 34349

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tggaactggatcttgtactg 271
             ||||||||||||||||||||
Sbjct: 28751 tggaactggatcttgtactg 28770
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>ref|XM_361721.1| Magnaporthe grisea 70-15 hypothetical protein (MG04195.4) partial
           mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 216 tgctgttgatgctgattctggtgttgttgctg 247
           |||||||||||||||| ||| || ||||||||
Sbjct: 773 tgctgttgatgctgatgctgttgatgttgctg 742
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>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
              sequence
          Length = 166888

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    gccgccgccgttggacgagg 186
              ||||||||||||||||||||
Sbjct: 114388 gccgccgccgttggacgagg 114407
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>gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete sequence
          Length = 196157

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    gctgttgatgctgattctgg 236
              ||||||||||||||||||||
Sbjct: 143100 gctgttgatgctgattctgg 143119



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    gctgttgatgctgattctgg 236
              ||||||||||||||||||||
Sbjct: 129790 gctgttgatgctgattctgg 129809



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   gctgttgatgctgattctgg 236
             ||||||||||||||||||||
Sbjct: 86827 gctgttgatgctgattctgg 86846



 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   gctgttgatgctgattctgg 236
             ||||||||||||||||||||
Sbjct: 82962 gctgttgatgctgattctgg 82981
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>gb|AC150308.1| Latimeria menadoensis clone VMRC4-24C12, complete sequence
          Length = 150025

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  gctgttgatgctgattctgg 236
            ||||||||||||||||||||
Sbjct: 9468 gctgttgatgctgattctgg 9487
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>ref|XM_322387.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 216  tgctgttgatgctgattctggtgttgttgctg 247
            |||||||||||||| | ||| |||||||||||
Sbjct: 2018 tgctgttgatgctgctgctgctgttgttgctg 1987
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>ref|XM_952680.1| Neurospora crassa OR74A hypothetical protein (NCU00302.1) partial
            mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 216  tgctgttgatgctgattctggtgttgttgctg 247
            |||||||||||||| | ||| |||||||||||
Sbjct: 2018 tgctgttgatgctgctgctgctgttgttgctg 1987
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>ref|XM_956737.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial
            mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  tggtgttgttgctgcccctg 253
            ||||||||||||||||||||
Sbjct: 1505 tggtgttgttgctgcccctg 1486
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>ref|XM_324621.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial
            mRNA
          Length = 2910

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  tggtgttgttgctgcccctg 253
            ||||||||||||||||||||
Sbjct: 1505 tggtgttgttgctgcccctg 1486
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      gccgccgccgttggacgagg 186
                ||||||||||||||||||||
Sbjct: 33550692 gccgccgccgttggacgagg 33550673
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>emb|AM051207.1| Cryptomonas lundii plastid partial rbcL gene for large subunit of
           RuBisCO, strain CCAC 0107
          Length = 1299

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 ctgcccctggaactggatct 264
           ||||||||||||||||||||
Sbjct: 223 ctgcccctggaactggatct 204
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>emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in linkage group 4, complete
              sequence
          Length = 149383

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ccatctattgaattgattga 38
              ||||||||||||||||||||
Sbjct: 119047 ccatctattgaattgattga 119028
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>gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosome 12, complete sequence
          Length = 171366

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 216    tgctgttgatgctgattctggtgttgttgctg 247
              |||||||| ||||||| ||| |||||||||||
Sbjct: 139878 tgctgttgttgctgatgctgctgttgttgctg 139847
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>ref|NM_076682.2| Caenorhabditis elegans K10C2.4 (fumarylacetoacetase) mRNA, complete
           cds
          Length = 1531

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 tggaactggatcttgtactg 271
           ||||||||||||||||||||
Sbjct: 946 tggaactggatcttgtactg 927
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 137      gctgggagcggcagcagcac 156
                ||||||||||||||||||||
Sbjct: 19772587 gctgggagcggcagcagcac 19772568
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      gccgccgccgttggacgagg 186
                ||||||||||||||||||||
Sbjct: 33641164 gccgccgccgttggacgagg 33641145
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>gb|AC008091.6|AC008091 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone
             BACR08K01, complete sequence
          Length = 175781

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 225   tgctgattctggtgttgttgctgc 248
             ||||| ||||||||||||||||||
Sbjct: 81367 tgctgcttctggtgttgttgctgc 81344
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>gb|AE004557.1| Pseudomonas aeruginosa PAO1, section 118 of 529 of the complete
            genome
          Length = 12561

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  gccggcgccggtgcgctggg 142
            ||||||||||||||||||||
Sbjct: 5464 gccggcgccggtgcgctggg 5483
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gctgggagcggcagcagcac 156
              ||||||||||||||||||||
Sbjct: 101538 gctgggagcggcagcagcac 101519
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>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete
             sequence
          Length = 240699

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 216   tgctgttgatgctgattctggtgttgttgctg 247
             |||||||| ||||||| ||| |||||||||||
Sbjct: 50251 tgctgttgttgctgatgctgctgttgttgctg 50282
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>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete
              sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    tgctgattctggtgttgttgctgc 248
              ||||| ||||||||||||||||||
Sbjct: 221675 tgctgcttctggtgttgttgctgc 221652


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,384,326
Number of Sequences: 3902068
Number of extensions: 2384326
Number of successful extensions: 66138
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65517
Number of HSP's gapped (non-prelim): 621
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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