ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl46e08 |
|---|---|
| Clone Library Name | barley_pub |
>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 32.7 bits (73), Expect = 0.22 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 10/79 (12%) Frame = -1 Query: 381 LKKEEFIEFFDEYIKVDAPQRRTVNVQVFS---------GNHSAEFKKAIAE-DDLPKTC 232 L K++ I+F+ E + VDAP+R V+V V + G ++ ++E LP+ Sbjct: 931 LSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPPLPQPE 990 Query: 231 RITDIFGFKRSRPLHRSLK 175 I ++ FKR PL +K Sbjct: 991 VIHNMTEFKRGLPLFPLVK 1009
>IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1018 Score = 32.7 bits (73), Expect = 0.22 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = -1 Query: 381 LKKEEFIEFFDEYIKVDAPQRRTVNVQVFS 292 L KE+ I+F+ E + VDAP+R V+V V + Sbjct: 930 LTKEDIIKFYKEMLAVDAPRRHKVSVHVLA 959
>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%) Frame = -1 Query: 381 LKKEEFIEFFDEYIKVDAPQRRTVNVQVFS---------GNHSAEFKKAIAE-DDLPKTC 232 L K++ I F+ E + VDAP+R V+V V + G ++ ++E LP+ Sbjct: 931 LTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLSEAPPLPQPE 990 Query: 231 RITDIFGFKRSRPLHRSLK 175 I ++ FKR PL +K Sbjct: 991 VIHNMTEFKRGLPLFPLVK 1009
>SH2D5_PONPY (Q5R732) SH2 domain-containing protein 5| Length = 339 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -3 Query: 337 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 167 G P K S GL R+PFGR D+ L +R + + + S P +EGR+ Sbjct: 81 GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136 Query: 166 RPDHNGLTYC 137 R G YC Sbjct: 137 RHARLGNPYC 146
>SH2D5_HUMAN (Q6ZV89) SH2 domain-containing protein 5| Length = 339 Score = 32.0 bits (71), Expect = 0.37 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -3 Query: 337 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 167 G P K S GL R+PFGR D+ L +R + + + S P +EGR+ Sbjct: 81 GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136 Query: 166 RPDHNGLTYC 137 R G YC Sbjct: 137 RHARLGNPYC 146
>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)| Length = 416 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +3 Query: 84 QNWVHACGDRLCTTLQTMQ 140 QN + ACGDRLC TL Q Sbjct: 67 QNRIRACGDRLCLTLSRAQ 85
>RUVA_SYMTH (Q67Q98) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 205 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/68 (30%), Positives = 35/68 (51%) Frame = -1 Query: 360 EFFDEYIKVDAPQRRTVNVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPLHRS 181 + F+ ++VD + V + V S A F++A+A +DL CR+ I G K ++ L Sbjct: 70 DLFELLLRVDGVGPK-VALAVLSTTDPAAFRRAVAFEDLDAICRVPGI-GRKTAQRLVLE 127 Query: 180 LKGGPGRI 157 LK G + Sbjct: 128 LKDKIGAV 135
>SPB8_BOVIN (Q5BIR5) Serpin B8| Length = 374 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +3 Query: 180 ASGAEAVIA*SRICR*SGKFWAGHP 254 A+GA AV+ SR CR KF A HP Sbjct: 328 AAGATAVVRNSRCCRMEPKFCADHP 352
>LY9_MOUSE (Q01965) T-lymphocyte surface antigen Ly-9 precursor (Lymphocyte| antigen 9) (Cell-surface molecule Ly-9) Length = 654 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/44 (22%), Positives = 23/44 (52%) Frame = -1 Query: 321 RRTVNVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPL 190 R ++ + G+H+ +++ + DLP TC+ + S+P+ Sbjct: 193 REDTHLNTYDGSHTLRVSQSVCDPDLPYTCKAWNPVSQNSSQPV 236
>RAPA_VIBPA (Q87LD0) RNA polymerase-associated protein rapA (EC 3.6.1.-)| (ATP-dependent helicase hepA) Length = 969 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 238 FGQVILGDRLLELCRMVAAEDLHVHCPPLRGVHLYVLIKEFDE 366 F +L R+ L R+ D+ +H P L+G +L + FDE Sbjct: 587 FNPDLLEQRIGRLDRIGQNRDIDIHVPYLKGTSQAILARWFDE 629
>PT1_MYCGE (P47668) Phosphoenolpyruvate-protein phosphotransferase (EC| 2.7.3.9) (Phosphotransferase system, enzyme I) Length = 572 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = +3 Query: 12 YMVYSIHDGLMALCNRVRPSRKINQNWVHACGDRLCTTLQTMQYVSPL*SGLDLPSAS 185 Y+ ++ L+ L V K+N W CG+ + + QY PL GL L S Sbjct: 468 YLYQPLNPALLRLIKLVVEGGKLNNVWTGMCGE-----MASDQYAIPLLLGLGLTELS 520
>ARAA_BACHD (Q9KBQ2) L-arabinose isomerase (EC 5.3.1.4)| Length = 497 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = +1 Query: 202 SLEAEYVGNPASFGQVILGDRLLELCRMVAAEDLHVHCPPL 324 S +Y + A +++LG +LE+C +AA + PL Sbjct: 328 SFMEDYTYHLAEGNELVLGSHMLEICPTIAANQPEIQVHPL 368
>FEOB_LEGPL (Q5WTE1) Ferrous iron transport protein B| Length = 751 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +2 Query: 26 HT*WINGIVQSCATIEKNQSKLGSCVW*QTMYYTADHAVCQSI 154 H ++ GI + +I N S+LGS +W AD + QS+ Sbjct: 601 HFDFLGGIKAAFGSIPANLSELGSALWNPVSASAADSELSQSV 643
>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3| Length = 3497 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = +1 Query: 253 LGDRLLELCRMVAAEDLHVHCPPLRGVHLYVL 348 L R ++ +++ AED+H H P + + +YV+ Sbjct: 192 LAHRHFKIEKLLDAEDVHTHKPDNKSIQMYVM 223
>Y1923_AQUAE (O67752) Hypothetical protein aq_1923 precursor| Length = 296 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -1 Query: 360 EFFDEYIKVDAPQRRTVNVQVFSGNHSAEFKKAIAEDDLP 241 EF + +D P+ VN+ GN+ F K +A D P Sbjct: 133 EFHLRSLSLDYPEAFEVNISFILGNYDHAFWKTVALSDRP 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,664,445 Number of Sequences: 219361 Number of extensions: 1271422 Number of successful extensions: 2839 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2789 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2839 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
