>gb|AY112097.1| Zea mays CL313_-3 mRNA sequence
          Length = 603

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 332 ggagagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccg 391
           |||||||| |||||||||||||||||||||||  ||||  |||||||||||||||| |||
Sbjct: 259 ggagagcacaccgcctcgaccgccaccctcttggtcacgctcgggcaggggtctccaccg 200

                                              
Query: 392 aagttgtcgggggagatggtgacggcgcatctctg 426
           ||||||||     |||||| |||| ||||||||||
Sbjct: 199 aagttgtcnnnnnagatggcgacgacgcatctctg 165



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Minus

                                                                     
Query: 93  ccagctggtcgcttttgaacaattcatggagatacagagcagagcaccaatcctaatc 150
           |||||||| |||||| ||||| ||||||||||  |  |||||||||||||||||||||
Sbjct: 442 ccagctggccgcttt-gaacagttcatggaga--cgtagcagagcaccaatcctaatc 388

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                           
Query: 334     agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
               ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 3507266 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 3507325

                   
Query: 394     gttg 397
               ||||
Sbjct: 3507326 gttg 3507329

>gb|AF508799.1| Oryza sativa (japonica cultivar-group) beta-galactosidase mRNA,
            complete cds
          Length = 2925

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 334  agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
            ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 2555 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 2496

                
Query: 394  gttg 397
            ||||
Sbjct: 2495 gttg 2492

>gb|AF499737.1| Oryza sativa (japonica cultivar-group) beta-galactosidase mRNA,
            complete cds
          Length = 2919

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 334  agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
            ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 2549 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 2490

                
Query: 394  gttg 397
            ||||
Sbjct: 2489 gttg 2486

>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
            complete sequence
          Length = 103330

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 334  agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
            ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 3109 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 3050

                
Query: 394  gttg 397
            ||||
Sbjct: 3049 gttg 3046

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                           
Query: 334     agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
               ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 3507377 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 3507436

                   
Query: 394     gttg 397
               ||||
Sbjct: 3507437 gttg 3507440

>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0026H19, complete sequence
          Length = 150620

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 334   agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
             ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 24919 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 24978

                 
Query: 394   gttg 397
             ||||
Sbjct: 24979 gttg 24982

>dbj|AK102192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087B02, full
            insert sequence
          Length = 3309

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 334  agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
            ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 2834 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 2775

                
Query: 394  gttg 397
            ||||
Sbjct: 2774 gttg 2771

>dbj|AK060645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G03, full
            insert sequence
          Length = 1600

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 334  agagcataccgcctcgaccgccaccctcttcatcacattcgggcaggggtctccgccgaa 393
            ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| || ||
Sbjct: 1138 agagcataccgcctcaaccgccacccttttcatcacctccgggcagggatctccaccaaa 1079

                
Query: 394  gttg 397
            ||||
Sbjct: 1078 gttg 1075

>ref|XM_954977.1| Neurospora crassa OR74A hypothetical protein (NCU05810.1) partial
           mRNA
          Length = 951

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 398 tcgggggagatggtgacggcg 418
           |||||||||||||||||||||
Sbjct: 608 tcgggggagatggtgacggcg 588

>gb|BC073483.1| Xenopus laevis cDNA clone IMAGE:5570009, partial cds
          Length = 5458

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 39   aatcttctgcaccttactccc 59
            |||||||||||||||||||||
Sbjct: 5287 aatcttctgcaccttactccc 5307

>ref|XM_325664.1| Neurospora crassa OR74A hypothetical protein (NCU05810.1) partial
           mRNA
          Length = 951

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 398 tcgggggagatggtgacggcg 418
           |||||||||||||||||||||
Sbjct: 608 tcgggggagatggtgacggcg 588

>emb|X81875.1|NCCPC2 N.crassa cpc-2 gene
          Length = 4269

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 398  tcgggggagatggtgacggcg 418
            |||||||||||||||||||||
Sbjct: 2926 tcgggggagatggtgacggcg 2906

>gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192515

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   aaatcacaatgctagaaatgg 173
             |||||||||||||||||||||
Sbjct: 21906 aaatcacaatgctagaaatgg 21886

>gb|AY109431.1| Zea mays CL313_1 mRNA sequence
          Length = 2617

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/52 (86%), Gaps = 2/52 (3%)
 Strand = Plus / Minus

                                                               
Query: 106 tttgaacaattcatggagatacagagcagagcaccaatcctaatctgaaatc 157
           |||||||||||||||||||| |  ||||||  || |||||||||||| ||||
Sbjct: 855 tttgaacaattcatggagatgc--agcagactacaaatcctaatctggaatc 806

>ref|XM_526121.1| PREDICTED: Pan troglodytes similar to SETMAR protein (LOC470738),
           mRNA
          Length = 1098

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 37  cacaaggccgtgtcgtcttt 18

>gb|AC119980.7| Mus musculus chromosome 8, clone RP24-495J19, complete sequence
          Length = 145150

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   gaaatcacaatgctagaaat 171
             ||||||||||||||||||||
Sbjct: 38616 gaaatcacaatgctagaaat 38597

>gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome 9, complete sequence
          Length = 161545

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ctcccccctacactccattc 74
              ||||||||||||||||||||
Sbjct: 111178 ctcccccctacactccattc 111159

>ref|XM_390046.1| Gibberella zeae PH-1 chromosome 1 GBLP_NEUCR Guanine
           nucleotide-binding protein beta subunit-like protein
           (Cross-pathway control WD-repeat protein cpc-2)
           (FG09870.1) partial mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 gtcgggggagatggtgacgg 416
           ||||||||||||||||||||
Sbjct: 609 gtcgggggagatggtgacgg 590

>gb|BC011635.2| Homo sapiens SET domain and mariner transposase fusion gene, mRNA
           (cDNA clone MGC:12780 IMAGE:4080032), complete cds
          Length = 1701

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 30  cacaaggccgtgtcgtcttt 11

>gb|AC023483.5| Homo sapiens chromosome 3 clone RP11-453A3 map 3p, complete sequence
          Length = 171051

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    cacaaggccgtgtcgtcttt 296
              ||||||||||||||||||||
Sbjct: 161166 cacaaggccgtgtcgtcttt 161147

>gb|AC034191.6| Homo sapiens chromosome 3 clone RP11-344L9 map 3p, complete sequence
          Length = 172221

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   cacaaggccgtgtcgtcttt 296
             ||||||||||||||||||||
Sbjct: 96955 cacaaggccgtgtcgtcttt 96936

>gb|BC008931.2| Homo sapiens SET domain and mariner transposase fusion gene, mRNA
           (cDNA clone IMAGE:2819917), partial cds
          Length = 1329

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 23  cacaaggccgtgtcgtcttt 4

>ref|NM_006515.1| Homo sapiens SET domain and mariner transposase fusion gene
           (SETMAR), mRNA
          Length = 2063

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 21  cacaaggccgtgtcgtcttt 2

>emb|AL390857.7| Human DNA sequence from clone RP11-51N22 on chromosome 13 Contains a
              heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
              pseudogene and a novel pseudogene (KIAA1935 FLJ31359),
              complete sequence
          Length = 154273

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    tcatggagatacagagcaga 135
              ||||||||||||||||||||
Sbjct: 109956 tcatggagatacagagcaga 109937

>emb|AL096860.1|ATT21L8 Arabidopsis thaliana DNA chromosome 3, BAC clone T21L8
          Length = 87224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   aatcctaatctgaaatcacaatgc 164
             ||||||||||| ||||||||||||
Sbjct: 29377 aatcctaatctaaaatcacaatgc 29354

>emb|BX005370.13| Zebrafish DNA sequence from clone DKEY-21P9 in linkage group 10, complete
              sequence
          Length = 208765

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    tggagatacagagcagagca 138
              ||||||||||||||||||||
Sbjct: 188996 tggagatacagagcagagca 189015

>emb|CR600492.1| full-length cDNA clone CS0DF011YL04 of Fetal brain of Homo sapiens
           (human)
          Length = 1651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 34  cacaaggccgtgtcgtcttt 15

>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence
          Length = 68440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tcatggagatacagagcaga 135
             ||||||||||||||||||||
Sbjct: 46198 tcatggagatacagagcaga 46217

>gb|AC103706.2| Homo sapiens chromosome 8, clone RP11-629O1, complete sequence
          Length = 189207

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   gtagtactttacagttgaac 236
             ||||||||||||||||||||
Sbjct: 32416 gtagtactttacagttgaac 32397

>gb|DQ393574.1| Metarhizium anisopliae G-protein beta subunit mRNA, complete cds
          Length = 1165

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 gtcgggggagatggtgacgg 416
           ||||||||||||||||||||
Sbjct: 696 gtcgggggagatggtgacgg 677

>dbj|AK222734.1| Homo sapiens mRNA for SET domain and mariner transposase fusion
           gene variant, clone: DMC03654
          Length = 2093

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 40  cacaaggccgtgtcgtcttt 21

>gb|AF212832.5| Homo sapiens chromosome 8 clone CTC-806C5 map 8q24.3, complete sequence
          Length = 122029

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    gtagtactttacagttgaac 236
              ||||||||||||||||||||
Sbjct: 102536 gtagtactttacagttgaac 102555

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaaataatcttctgcacctt 53
              ||||||||||||||||||||
Sbjct: 838347 aaaataatcttctgcacctt 838366

>gb|U80776.1|HSU80776 Human EST clone NIB1543 mariner transposon Hsmar1 orf gene,
           complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 21  cacaaggccgtgtcgtcttt 2

>gb|AF054989.1|AF054989 Homo sapiens clone 23658 unknown mRNA, complete cds
          Length = 2087

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 cacaaggccgtgtcgtcttt 296
           ||||||||||||||||||||
Sbjct: 30  cacaaggccgtgtcgtcttt 11


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,205,415
Number of Sequences: 3902068
Number of extensions: 3205415
Number of successful extensions: 84237
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84114
Number of HSP's gapped (non-prelim): 123
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)