Clone Name | rbastl46d09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2952 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 2720 tctcaatttgactataaacaa 2700
>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA Length = 2953 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 2721 tctcaatttgactataaacaa 2701
>emb|AL589677.6| Human DNA sequence from clone RP11-12P4 on chromosome X, complete sequence Length = 129422 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gcatgtacaaaaacaacaaag 119 ||||||||||||||||||||| Sbjct: 78570 gcatgtacaaaaacaacaaag 78590
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 550342 tctcaatttgactataaacaa 550322
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 140302 tctcaatttgactataaacaa 140282
>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full insert sequence Length = 2952 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 2720 tctcaatttgactataaacaa 2700
>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full insert sequence Length = 2953 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tctcaatttgactataaacaa 287 ||||||||||||||||||||| Sbjct: 2721 tctcaatttgactataaacaa 2701
>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence Length = 154772 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 tcaatttgactataaacaaacagt 292 |||||||||||||||||| ||||| Sbjct: 102045 tcaatttgactataaacagacagt 102022
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ataaacaaacagtacacagc 299 |||||||||||||||||||| Sbjct: 102206 ataaacaaacagtacacagc 102225
>gb|AC160022.2| Pan troglodytes BAC clone CH251-424F19 from chromosome unknown, complete sequence Length = 197895 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 taatacatcagcaatcctga 73 |||||||||||||||||||| Sbjct: 31203 taatacatcagcaatcctga 31184
>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete sequence Length = 246231 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tcaatttgactataaacaaacagt 292 |||||||||||||||||| ||||| Sbjct: 84302 tcaatttgactataaacagacagt 84325
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ataaacaaacagtacacagc 299 |||||||||||||||||||| Sbjct: 45924 ataaacaaacagtacacagc 45905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,080,035 Number of Sequences: 3902068 Number of extensions: 3080035 Number of successful extensions: 58763 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58714 Number of HSP's gapped (non-prelim): 49 length of query: 333 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 311 effective length of database: 17,147,199,772 effective search space: 5332779129092 effective search space used: 5332779129092 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)