ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2... 30 4.1
2ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2... 30 4.1

>ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 403

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 406 VPLFFEAMESLIK*-VTGNLRMDIPSKLFSYEHTAVLFHG 290
           VP    A+ SL +  V+  +R  +P+ LF+Y HT  L+HG
Sbjct: 192 VPTRIPAIVSLSRGPVSPLVRFQLPNVLFAYAHTLALYHG 231



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>ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 399

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -2

Query: 463 AAVGAPGAE--CAVKTPNREFVPLFFEAMESLIK*VTGNL-RMDIPSKLFSYEHTAVLFH 293
           AA   P AE  CA +      +P    A+ SL +     L R  +P+ LF+Y HT  L+H
Sbjct: 169 AAAAEPFAEDSCAARPLA---LPARIPALASLSRSPASPLVRFQLPNVLFAYAHTLALYH 225

Query: 292 G 290
           G
Sbjct: 226 G 226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,512,104
Number of Sequences: 219361
Number of extensions: 1163781
Number of successful extensions: 2685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2684
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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