>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +2

Query: 170 GSSKS*AAVAERPKSMAFSFPPNNNQHSCNLAKIYSSKLAV 292
           GSS S AA+   PK++A+S  P N+  SC  A   SS L +
Sbjct: 269 GSSSSSAAITSSPKAIAYS--PYNDDGSCKSADAVSSDLTL 307

>DOF41_ARATH (Q9M161) Dof zinc finger protein DOF4.1 (AtDOF4.1)|
          Length = 294

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
 Frame = +2

Query: 2   DSYNADTIYCNRQNTPKPQYIVTNCVRTEKK**HWRRH---KNIPFDRRRKKKRPCSFPG 172
           +S N    Y N  +  +P+Y+  +C R      +W      +N+P     +K +   FP 
Sbjct: 74  NSSNTKFCYYNNYSLAQPRYLCKSCRR------YWTEGGSLRNVPVGGGSRKNKKLPFPN 127

Query: 173 SSKS*AAVAERP---------KSMAFSFPPNNNQHSCNLAKIYSSKL 286
           SS S ++    P          S + S P   +Q++ +L+  +SS +
Sbjct: 128 SSTS-SSTKNLPDLNPPFVFTSSASSSNPSKTHQNNNDLSLSFSSPM 173

>TRHDE_HUMAN (Q9UKU6) Thyrotropin-releasing hormone degrading ectoenzyme (EC|
           3.4.19.6) (TRH-degrading ectoenzyme) (TRH-DE)
           (TRH-specific aminopeptidase) (Thyroliberinase)
           (Pyroglutamyl-peptidase II) (PAP-II)
          Length = 1024

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +3

Query: 87  KRNNNIGGDTKTSHLTEEEKKKGLVHSQAPARVRPPSPRDQNPWLFPFLQTIINTHVTSQ 266
           +RN++ GGD+        + + G V S      +PPS  ++ PW  P+ Q  ++ H+   
Sbjct: 97  RRNHHAGGDSW-------QPEAGGVASPGTTSAQPPSEEEREPW-EPWTQLRLSGHLKPL 148

Query: 267 KYTAQNWLLLTS 302
            Y     L+LT+
Sbjct: 149 HYN----LMLTA 156

>IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD and|
           tetratricopeptide repeats protein 2)
          Length = 1462

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -3

Query: 231 GKEKAMD-FGLSATAA*LLLEPGNEQGLFFFLLLSNG 124
           G EKA+D F    +++  LL+ G+ +GL FF+ L +G
Sbjct: 176 GDEKALDMFNWKKSSSGSLLKMGSHEGLLFFVSLMDG 212

>VP14_EBV (P03179) Probable membrane antigen P140 (Tegument protein)|
          Length = 1318

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 111 DTKTSHLTEEEKKKGLVHSQAPARVRPPS--PRDQNPWLFPFLQTIINT 251
           DT+T+H  E     G +H+    +   P    R Q+P LFPF+  I ++
Sbjct: 263 DTRTAHSLEH----GFIHAAGTIQANCPQLFMRRQHPGLFPFVNAIASS 307

>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC|
           3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a
           subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein
           1)
          Length = 839

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -2

Query: 235 WRKGKSHGFWSLGDGGLTLAGAWE*T-RPFFFSSSVKWDVFVSPPMLLFLFSSYTICNNV 59
           W+KG+S    S+G   + L  AW  T     FS+S K  + +    +   +S +    N 
Sbjct: 499 WKKGESITATSVGTYPIGLDWAWHGTENALLFSNSYKMKLSILMGFIHMTYSYFFSLANH 558

Query: 58  LWFWSILSV 32
           L+F S++ +
Sbjct: 559 LYFNSMIDI 567

>WEFC_STROR (Q6L5S6) Receptor polysaccharide phosphotransferase wefC (EC|
           2.7.-.-) (Stealth protein wefC)
          Length = 332

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 141 EKKKGLVHSQAPARVRPPSPRDQNPWLFPFLQTIINTHVTSQKYTAQN 284
           EK+K ++   + +R R PS  D N WLF + Q      + S KY   N
Sbjct: 231 EKEKAVLERTSASRFRNPS--DTNVWLFKYWQ------IASGKYAIGN 270

>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 90  RNNNIGGDTKTSHLTEEEKKKGLVHSQAPARVRPPSP 200
           R+   GG    +     E ++G  +S++P+R R PSP
Sbjct: 845 RDRESGGRAAAAAPGNSEARRGRSYSRSPSRTRSPSP 881

>SMBP2_MESAU (Q60560) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent|
           helicase IGHMBP2) (Immunoglobulin mu-binding protein 2)
           (SMUBP-2) (Insulin II gene enhancer-binding protein)
           (RIPE3B-binding complex 3B2 p110 subunit) (RIP-1)
          Length = 989

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 45  LQNHSTLL--QIV*ELKRNNNIGGDTKTSHLTEEEKKKGLVHSQAPARVRPPSPRDQNP 215
           L +H  LL  QI  E    ++  G+ K  H+T   K        AP    PPSP    P
Sbjct: 748 LSSHDRLLVHQIAEEHGLRHDSTGEGKARHITVSRKSPAGSGGVAPQLPSPPSPAQAEP 806

>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)|
           (OSF-2)
          Length = 838

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 105 GGDTKTSHLTEEEKKKGLVHSQAPARVRPPSPRDQNP 215
           GGD    HL E+E+ K L+    PA+  P + R Q P
Sbjct: 795 GGD---GHLFEDEEIKRLLQGDTPAKKIPANKRVQGP 828

>MET2_SCHPO (O60062) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase)
          Length = 489

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/62 (25%), Positives = 25/62 (40%)
 Frame = +2

Query: 101 HWRRHKNIPFDRRRKKKRPCSFPGSSKS*AAVAERPKSMAFSFPPNNNQHSCNLAKIYSS 280
           HW  H       R +++RPC   GSS +  +    P S   S P      + + + +  S
Sbjct: 274 HWVVHNE---GNRNRRERPCRSNGSSPTSESALNSPASSVSSLPSLGASQTTDSSSLNQS 330

Query: 281 KL 286
            L
Sbjct: 331 SL 332

>AFAD_HUMAN (P55196) Afadin (AF-6 protein)|
          Length = 1816

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 138  EEKKKGLVHSQAPARVRPPSPRDQNP 215
            +E  + L+  +AP   RPP PRD  P
Sbjct: 1652 DEAARRLLEPEAPGLCRPPLPRDYEP 1677

>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2|
           (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 133 VKWDVFVSPPMLLFLFSSYTI 71
           ++W VF  PPM ++L +SY I
Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261

>A36DE_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor|
          Length = 912

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 39  RILQNHSTLLQIV*ELKRNNNIGGDTKTSHLTEEEKKKGLVHSQAPARVRPPSPRDQN 212
           +IL     LLQ      + N +  DT+T    +E K   L  SQ+ ++ +    RDQN
Sbjct: 498 QILLQLQNLLQF-----QQNQLKSDTQTQSQLQESKSNSLSQSQSQSQEQLQLQRDQN 550

>WEFC_STRGN (Q83YR8) Receptor polysaccharide phosphotransferase wefC (EC|
           2.7.-.-) (Stealth protein wefC)
          Length = 333

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 141 EKKKGLVHSQAPARVRPPSPRDQNPWLFPFLQ 236
           EK+K ++ + + +R R PS  D N WLF + Q
Sbjct: 232 EKEKAVLETTSASRFRSPS--DTNVWLFKYWQ 261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,928,469
Number of Sequences: 219361
Number of extensions: 929367
Number of successful extensions: 2897
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2897
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)