ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.29
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
3dbj|AK102079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
4dbj|AK058345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
5gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.29
6gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, com... 42 1.2
7gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome ... 42 1.2
8gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's H... 42 1.2
9emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chro... 42 1.2
10gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosom... 42 1.2
11gb|AC126455.4| Mus musculus BAC clone RP23-260P2 from chromosome... 42 1.2
12gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosom... 42 1.2
13gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosom... 42 1.2
14gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome... 42 1.2
15gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, comp... 42 1.2
16emb|AL031534.1|SPBC4F6 S.pombe chromosome II cosmid c4F6 42 1.2
17emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chro... 42 1.2
18gb|AC073173.7| Homo sapiens chromosome 10 clone RP11-183D3, comp... 42 1.2
19gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosom... 42 1.2
20gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome... 42 1.2
21gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome... 42 1.2
22dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
23dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
24emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 42 1.2
25dbj|AK059658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
26gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complet... 42 1.2
27emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chr... 42 1.2
28gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome... 40 4.6
29gb|AF127019.7| Homo sapiens chromosome 8 clone GS1-188e4 map p23... 40 4.6
30ref|XM_445601.1| Candida glabrata CBS138, CAGL0D04268g partial mRNA 40 4.6
31gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete ... 40 4.6
32gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete seq... 40 4.6
33gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence 40 4.6
34emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 40 4.6
35gb|AC113147.3| Homo sapiens chromosome 8, clone RP11-357H1, comp... 40 4.6
36gb|AC008006.10| Homo sapiens chromosome 18, clone RP11-233K20, c... 40 4.6
37gb|AC023306.8| Homo sapiens chromosome 8, clone RP11-199C5, comp... 40 4.6
38gb|AC099706.8| Mus musculus, clone RP23-267P24, complete sequence 40 4.6
39gb|AC138071.2| Homo sapiens chromosome 3 clone RP11-504G20, comp... 40 4.6
40gb|AY108472.1| Zea mays PCO119082 mRNA sequence 40 4.6
41gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromoso... 40 4.6
42gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, com... 40 4.6
43emb|AL671321.16| Mouse DNA sequence from clone RP23-274I19 on ch... 40 4.6
44gb|AC166749.6| Mus musculus chromosome 1, clone RP23-463A15, com... 40 4.6
45emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chro... 40 4.6 
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
            complete sequence
          Length = 156163

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 284  agggcgaggcgacggggccagc 305
            ||||||||||||||||||||||
Sbjct: 1336 agggcgaggcgacggggccagc 1357
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 284      agggcgaggcgacggggccagc 305
                ||||||||||||||||||||||
Sbjct: 18361499 agggcgaggcgacggggccagc 18361520
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>dbj|AK102079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082J04, full
           insert sequence
          Length = 796

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 284 agggcgaggcgacggggccagc 305
           ||||||||||||||||||||||
Sbjct: 66  agggcgaggcgacggggccagc 45
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>dbj|AK058345.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D12, full
           insert sequence
          Length = 919

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 284 agggcgaggcgacggggccagc 305
           ||||||||||||||||||||||
Sbjct: 140 agggcgaggcgacggggccagc 119
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 291     ggcgacggggccagcgccggcaagggcgtcggac 324
               |||| ||| ||||||||||||||||||| |||||
Sbjct: 3629261 ggcggcggcgccagcgccggcaagggcggcggac 3629294



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     ggccagcgccggcaagggcg 318
               ||||||||||||||||||||
Sbjct: 4454998 ggccagcgccggcaagggcg 4455017
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>gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, complete sequence
          Length = 150036

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   tacaagaaacagaggctcagg 244
             |||||||||||||||||||||
Sbjct: 71642 tacaagaaacagaggctcagg 71662
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>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence
          Length = 216443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 225    acaagaaacagaggctcaggtaaac 249
              |||||||||||||||||||| ||||
Sbjct: 143593 acaagaaacagaggctcagggaaac 143617
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>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    gcacaaaacaaagaatgttaa 208
              |||||||||||||||||||||
Sbjct: 147965 gcacaaaacaaagaatgttaa 147945
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>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete
              sequence
          Length = 162359

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    gcacaaaacaaagaatgttaa 208
              |||||||||||||||||||||
Sbjct: 111236 gcacaaaacaaagaatgttaa 111216
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>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete
             sequence
          Length = 197211

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    caaacaagccctatctatgta 100
             |||||||||||||||||||||
Sbjct: 57482 caaacaagccctatctatgta 57462
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>gb|AC126455.4| Mus musculus BAC clone RP23-260P2 from chromosome 16, complete
            sequence
          Length = 197474

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   caaacaagccctatctatgta 100
            |||||||||||||||||||||
Sbjct: 1844 caaacaagccctatctatgta 1864
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>gb|AC121899.3| Mus musculus BAC clone RP24-166J12 from chromosome 6, complete
            sequence
          Length = 129975

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 188  gcacaaaacaaagaatgttaa 208
            |||||||||||||||||||||
Sbjct: 5079 gcacaaaacaaagaatgttaa 5059
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>gb|AC124523.5| Mus musculus BAC clone RP23-399P19 from chromosome 6, complete sequence
          Length = 188084

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   gcacaaaacaaagaatgttaa 208
             |||||||||||||||||||||
Sbjct: 86038 gcacaaaacaaagaatgttaa 86018



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   gcacaaaacaaagaatgttaa 208
             |||||||||||||||||||||
Sbjct: 57480 gcacaaaacaaagaatgttaa 57460
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>gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome 7, complete sequence
          Length = 208092

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    gcacaaaacaaagaatgttaa 208
              |||||||||||||||||||||
Sbjct: 192503 gcacaaaacaaagaatgttaa 192523
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>gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, complete sequence
          Length = 171722

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 224  tacaagaaacagaggctcagg 244
            |||||||||||||||||||||
Sbjct: 2237 tacaagaaacagaggctcagg 2257
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>emb|AL031534.1|SPBC4F6 S.pombe chromosome II cosmid c4F6
          Length = 44778

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    aaaatatattgcatatgccgg 48
             |||||||||||||||||||||
Sbjct: 37560 aaaatatattgcatatgccgg 37540
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>emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chromosome 2, complete
              sequence
          Length = 163577

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    gcacaaaacaaagaatgttaa 208
              |||||||||||||||||||||
Sbjct: 160342 gcacaaaacaaagaatgttaa 160362
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>gb|AC073173.7| Homo sapiens chromosome 10 clone RP11-183D3, complete sequence
          Length = 114611

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   aaaagcatatatagaaagtaa 129
             |||||||||||||||||||||
Sbjct: 94053 aaaagcatatatagaaagtaa 94073
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>gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosome 8, complete sequence
          Length = 170167

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   gcacaaaacaaagaatgttaa 208
             |||||||||||||||||||||
Sbjct: 78618 gcacaaaacaaagaatgttaa 78638
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>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence
          Length = 256298

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    gcacaaaacaaagaatgttaa 208
              |||||||||||||||||||||
Sbjct: 126424 gcacaaaacaaagaatgttaa 126404
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>gb|AC154359.2| Mus musculus BAC clone RP23-178L8 from chromosome 16, complete sequence
          Length = 212696

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     caaacaagccctatctatgta 100
              |||||||||||||||||||||
Sbjct: 158059 caaacaagccctatctatgta 158079
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 198      aagaatgttaactgcacacta 218
                |||||||||||||||||||||
Sbjct: 14361749 aagaatgttaactgcacacta 14361729
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   aagaatgttaactgcacacta 218
             |||||||||||||||||||||
Sbjct: 53552 aagaatgttaactgcacacta 53532
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 202   atgttaactgcacactaatacatac 226
             ||||| |||||||||||||||||||
Sbjct: 75728 atgtttactgcacactaatacatac 75704
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>dbj|AK059658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D06, full
            insert sequence
          Length = 1686

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 198  aagaatgttaactgcacacta 218
            |||||||||||||||||||||
Sbjct: 1528 aagaatgttaactgcacacta 1508
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>gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complete sequence
          Length = 157089

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   gcacaaaacaaagaatgttaa 208
             |||||||||||||||||||||
Sbjct: 25129 gcacaaaacaaagaatgttaa 25149
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>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete
              sequence
          Length = 209857

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 225    acaagaaacagaggctcaggtaaac 249
              |||||||||||||||||||| ||||
Sbjct: 132781 acaagaaacagaggctcagggaaac 132757
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>gb|AC161416.2| Mus musculus BAC clone RP23-306A2 from chromosome 1, complete sequence
          Length = 196764

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 213   acactaatacatacaagaaacaga 236
             |||||||||||||| |||||||||
Sbjct: 66907 acactaatacatactagaaacaga 66930
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>gb|AF127019.7| Homo sapiens chromosome 8 clone GS1-188e4 map p23.2, complete sequence
          Length = 182548

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   caagaaacagaggctcaggt 245
             ||||||||||||||||||||
Sbjct: 44904 caagaaacagaggctcaggt 44923
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>ref|XM_445601.1| Candida glabrata CBS138, CAGL0D04268g partial mRNA
          Length = 2166

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    aacttccaaaagacaaaaga 21
            ||||||||||||||||||||
Sbjct: 1941 aacttccaaaagacaaaaga 1960
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>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     atgtatgttctgtaaaagcatata 119
              |||||||||||||||| |||||||
Sbjct: 119385 atgtatgttctgtaaatgcatata 119408
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>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence
          Length = 113088

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   atagaaagtaatcacaacaaaatg 142
             ||||||||| ||||||||||||||
Sbjct: 56114 atagaaagttatcacaacaaaatg 56137
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>gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence
          Length = 140345

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    agaaagtaatcacaacaaaa 140
              ||||||||||||||||||||
Sbjct: 121105 agaaagtaatcacaacaaaa 121124
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>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aacttccaaaagacaaaaga 21
              ||||||||||||||||||||
Sbjct: 418329 aacttccaaaagacaaaaga 418310
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>gb|AC113147.3| Homo sapiens chromosome 8, clone RP11-357H1, complete sequence
          Length = 194518

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   caagaaacagaggctcaggt 245
             ||||||||||||||||||||
Sbjct: 84426 caagaaacagaggctcaggt 84407
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>gb|AC008006.10| Homo sapiens chromosome 18, clone RP11-233K20, complete sequence
          Length = 164076

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ccaaaagacaaaagaacagc 26
              ||||||||||||||||||||
Sbjct: 105598 ccaaaagacaaaagaacagc 105579
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>gb|AC023306.8| Homo sapiens chromosome 8, clone RP11-199C5, complete sequence
          Length = 153197

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    caagaaacagaggctcaggt 245
              ||||||||||||||||||||
Sbjct: 151489 caagaaacagaggctcaggt 151470
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>gb|AC099706.8| Mus musculus, clone RP23-267P24, complete sequence
          Length = 168307

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   gcacaaaacaaagaatgtta 207
             ||||||||||||||||||||
Sbjct: 96081 gcacaaaacaaagaatgtta 96062
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>gb|AC138071.2| Homo sapiens chromosome 3 clone RP11-504G20, complete sequence
          Length = 194062

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    agaaagtaatcacaacaaaa 140
              ||||||||||||||||||||
Sbjct: 108192 agaaagtaatcacaacaaaa 108173
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>gb|AY108472.1| Zea mays PCO119082 mRNA sequence
          Length = 2122

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 313  agggcgtcggaccgcttgatgctgcccatgcc 344
            ||||||||||| | ||||||||| ||||||||
Sbjct: 1939 agggcgtcggatctcttgatgctccccatgcc 1908
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>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete
             sequence
          Length = 204711

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   ctgcacactaatacatacaa 228
             ||||||||||||||||||||
Sbjct: 71111 ctgcacactaatacatacaa 71092
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>gb|AC118596.7| Mus musculus chromosome 1, clone RP24-199M24, complete sequence
          Length = 149611

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    gaaaatatattgcatatgcc 46
             ||||||||||||||||||||
Sbjct: 18665 gaaaatatattgcatatgcc 18646
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>emb|AL671321.16| Mouse DNA sequence from clone RP23-274I19 on chromosome X, complete
              sequence
          Length = 234316

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    cacaaaacaaagaatgttaa 208
              ||||||||||||||||||||
Sbjct: 212046 cacaaaacaaagaatgttaa 212065
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>gb|AC166749.6| Mus musculus chromosome 1, clone RP23-463A15, complete sequence
          Length = 186262

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    gcacaaaacaaagaatgtta 207
              ||||||||||||||||||||
Sbjct: 148310 gcacaaaacaaagaatgtta 148291
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>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete
             sequence
          Length = 237055

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aagaaacagaggctcaggta 246
             ||||||||||||||||||||
Sbjct: 11352 aagaaacagaggctcaggta 11371


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,538,185
Number of Sequences: 3902068
Number of extensions: 3538185
Number of successful extensions: 78026
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77832
Number of HSP's gapped (non-prelim): 194
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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