ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
2dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
3dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
4emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
5emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-20... 44 0.41
6gb|AC005879.3|AC005879 citb_287_c_20, complete sequence 44 0.41
7emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chr... 44 0.41
8ref|XM_462657.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
9gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome... 42 1.6
10gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, compl... 42 1.6
11gb|AC073332.13| Homo sapiens BAC clone RP11-435M6 from 7, comple... 42 1.6
12gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, com... 42 1.6
13emb|AL160175.5| Human DNA sequence from clone RP11-243J16 on chr... 42 1.6
14ref|XM_693513.1| PREDICTED: Danio rerio similar to PI-3-kinase-r... 42 1.6
15ref|XM_693217.1| PREDICTED: Danio rerio similar to PI-3-kinase-r... 42 1.6
16emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in ... 42 1.6
17emb|BX004999.8| Zebrafish DNA sequence from clone DKEY-66I24 in ... 42 1.6
18gb|AY996787.1| Cunninghamella elegans unknown mRNA 42 1.6
19gb|AC009962.11| Homo sapiens BAC clone RP11-366L5 from 2, comple... 42 1.6
20gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, comple... 42 1.6
21gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosom... 40 6.4
22gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, com... 40 6.4
23gb|BC070806.1| Xenopus laevis hypothetical protein MGC83879, mRN... 40 6.4
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.4
25gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome... 40 6.4
26ref|XM_729807.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.4
27gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete seq... 40 6.4
28gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete ... 40 6.4
29gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 40 6.4
30emb|CR352342.9| Zebrafish DNA sequence from clone CH211-134H7 in... 40 6.4
31emb|BX322346.1| Human DNA sequence from clone RP6-42F4 on chromo... 40 6.4
32emb|AL596222.13| Human DNA sequence from clone RP11-114O18 on ch... 40 6.4
33emb|AL359758.15| Human DNA sequence from clone RP11-544O24 on ch... 40 6.4
34emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on ch... 40 6.4
35gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.4
36emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chr... 40 6.4
37emb|AL034369.1|HSA149D17 Human DNA sequence from clone RP6-149D1... 40 6.4
38gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, com... 40 6.4
39emb|X97751.1|SCIV23 S.cerevisiae chrIV genes STE7, CLB3, MSH5, R... 40 6.4
40emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.4
41emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 40 6.4
42emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 i... 40 6.4
43gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, comple... 40 6.4
44gb|AC183687.3| Pan troglodytes BAC clone CH251-25N14 from chromo... 40 6.4
45gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park C... 40 6.4
46gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, com... 40 6.4
47emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chro... 40 6.4
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
50gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 40 6.4
51gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome... 40 6.4
52gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 40 6.4
53dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
54emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in... 40 6.4
55emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in ... 40 6.4
56emb|Z82056.1|CET26H5 Caenorhabditis elegans Cosmid T26H5, comple... 40 6.4
57emb|Z74196.1|SCYDL148C S.cerevisiae chromosome IV reading frame ... 40 6.4
58emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2... 40 6.4
59emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on ch... 40 6.4
60gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, compl... 40 6.4
61dbj|AP004504.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.4
62emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on ch... 40 6.4 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 201      attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 256
                ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 22320973 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 22320918



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 440      cattagcccctacattcctcgagcttctgctgcag 474
                ||||| |||||||| ||||| ||||||||||||||
Sbjct: 22320730 cattaacccctacactcctcaagcttctgctgcag 22320696
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>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full
            insert sequence
          Length = 3754

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 201  attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 256
            ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 3621 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 3566



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 440  cattagcccctacattcctcgagcttctgctgcag 474
            ||||| |||||||| ||||| ||||||||||||||
Sbjct: 3378 cattaacccctacactcctcaagcttctgctgcag 3344
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>dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C12, full
            insert sequence
          Length = 1344

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 201  attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 256
            ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 1205 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 1150



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 440 cattagcccctacattcctcgagcttctgctgcag 474
           ||||| |||||||| ||||| ||||||||||||||
Sbjct: 962 cattaacccctacactcctcaagcttctgctgcag 928
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 201   attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 256
             ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 71877 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 71822



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 440   cattagcccctacattcctcgagcttctgctgcag 474
             ||||| |||||||| ||||| ||||||||||||||
Sbjct: 71634 cattaacccctacactcctcaagcttctgctgcag 71600
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>emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-201H11 on chromosome X Contains
             part of the IL1RAPL2 gene for  interleukin 1 receptor
             accessory protein-like 2, complete sequence
          Length = 32886

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 206   ttctgggaaaatgaagaagaaa 227
             ||||||||||||||||||||||
Sbjct: 21224 ttctgggaaaatgaagaagaaa 21203
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>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence
          Length = 190982

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 213    aaaatgaagaagaaaatcctca 234
              ||||||||||||||||||||||
Sbjct: 176727 aaaatgaagaagaaaatcctca 176748
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>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete
              sequence
          Length = 142565

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 123    agaagtataaaaaagaaaacatccta 148
              ||||||||||||||||||| ||||||
Sbjct: 132173 agaagtataaaaaagaaaagatccta 132148
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>ref|XM_462657.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1884

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 446  cccctacattcctcgagcttctgctgcag 474
            |||||||| ||||| ||||||||||||||
Sbjct: 1880 cccctacactcctcaagcttctgctgcag 1852
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>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence
          Length = 141921

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 348    ggtagttacccaaactcttca 368
              |||||||||||||||||||||
Sbjct: 121300 ggtagttacccaaactcttca 121320
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>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence
          Length = 218746

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    aaatgaagaagaaaatcctca 234
              |||||||||||||||||||||
Sbjct: 208786 aaatgaagaagaaaatcctca 208806
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>gb|AC073332.13| Homo sapiens BAC clone RP11-435M6 from 7, complete sequence
          Length = 132191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     ctttcttttctgaaacaagga 113
              |||||||||||||||||||||
Sbjct: 101856 ctttcttttctgaaacaagga 101836
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>gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, complete sequence
          Length = 157222

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 214    aaatgaagaagaaaatcctca 234
              |||||||||||||||||||||
Sbjct: 105136 aaatgaagaagaaaatcctca 105156
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>emb|AL160175.5| Human DNA sequence from clone RP11-243J16 on chromosome 20 Contains the
             BCL2L1 gene for the apoptosis regulator BCL2-like 1, the
             C20orf1 gene encoding the targeting protein for XKLP2
             (FLS353), the MYLK gene for myosin light chain kinase 2
             (skeletal muscle), the FKHL18 gene for forkhead-like 18
             (Drosophila)(FREAC10), an ATP synthase H+ transporting
             mitochondrial F0 complex subunit f isoform 2 (ATP5J2)
             pseudogene, the DUSP15 gene for dual specificity
             phosphatase-like 15, the 3' end of a novel gene, the 5'
             end of the C20orf125 gene and seven CpG islands, complete
             sequence
          Length = 168860

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   gagaagtataaaaaagaaaac 142
             |||||||||||||||||||||
Sbjct: 21072 gagaagtataaaaaagaaaac 21052
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>ref|XM_693513.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1
           (LOC570080), mRNA
          Length = 11034

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 aaccacttttcagcatggaaa 255
           |||||||||||||||||||||
Sbjct: 447 aaccacttttcagcatggaaa 467
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>ref|XM_693217.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1
           (LOC569810), mRNA
          Length = 11022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 aaccacttttcagcatggaaa 255
           |||||||||||||||||||||
Sbjct: 447 aaccacttttcagcatggaaa 467
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>emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in linkage group 3, complete
              sequence
          Length = 174108

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 235    aaccacttttcagcatggaaa 255
              |||||||||||||||||||||
Sbjct: 147114 aaccacttttcagcatggaaa 147094
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>emb|BX004999.8| Zebrafish DNA sequence from clone DKEY-66I24 in linkage group 3, complete
              sequence
          Length = 168839

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 235    aaccacttttcagcatggaaa 255
              |||||||||||||||||||||
Sbjct: 132305 aaccacttttcagcatggaaa 132285
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>gb|AY996787.1| Cunninghamella elegans unknown mRNA
          Length = 916

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 131 aaaaaagaaaacatcctattc 151
           |||||||||||||||||||||
Sbjct: 655 aaaaaagaaaacatcctattc 675
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>gb|AC009962.11| Homo sapiens BAC clone RP11-366L5 from 2, complete sequence
          Length = 177512

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    agaaaattatgcaaaatttta 35
             |||||||||||||||||||||
Sbjct: 51140 agaaaattatgcaaaatttta 51120
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>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence
          Length = 198278

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 12     aaaagaaaattatgcaaaattttagatca 40
              |||| ||||||||||||||||||| ||||
Sbjct: 181709 aaaaaaaaattatgcaaaattttatatca 181737
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>gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosome 14, complete sequence
          Length = 214057

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cacttttcagcatggaaaag 257
              ||||||||||||||||||||
Sbjct: 112030 cacttttcagcatggaaaag 112049
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>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence
          Length = 216103

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacacaacattaaaagaaaa 20
             ||||||||||||||||||||
Sbjct: 11439 aacacaacattaaaagaaaa 11458
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>gb|BC070806.1| Xenopus laevis hypothetical protein MGC83879, mRNA (cDNA clone
            MGC:83879 IMAGE:6857015), complete cds
          Length = 3504

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aacacaacattaaaagaaaa 20
            ||||||||||||||||||||
Sbjct: 3324 aacacaacattaaaagaaaa 3305
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      taaaagaaaattatgcaaaatttt 34
               ||||||| ||||||||||||||||
Sbjct: 5000069 taaaagataattatgcaaaatttt 5000092
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>gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome 19, complete sequence
          Length = 203282

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    atgaaaactccccacagagctgaa 294
              |||||||||| |||||||||||||
Sbjct: 146752 atgaaaactctccacagagctgaa 146775
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>ref|XM_729807.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300415.00.0)
           partial mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  ttaaaagaaaattatgcaaa 29
           ||||||||||||||||||||
Sbjct: 427 ttaaaagaaaattatgcaaa 446
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>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence
          Length = 132894

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attaaaagaaaattatgcaa 28
             ||||||||||||||||||||
Sbjct: 20311 attaaaagaaaattatgcaa 20330
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>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence
          Length = 89758

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     attaaaagaaaattatgcaa 28
             ||||||||||||||||||||
Sbjct: 52459 attaaaagaaaattatgcaa 52478
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aacacaacattaaaagaaaa 20
              ||||||||||||||||||||
Sbjct: 297823 aacacaacattaaaagaaaa 297804
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>emb|CR352342.9| Zebrafish DNA sequence from clone CH211-134H7 in linkage group 12,
              complete sequence
          Length = 186937

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    aaaacatcctattctttctg 157
              ||||||||||||||||||||
Sbjct: 165214 aaaacatcctattctttctg 165233
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>emb|BX322346.1| Human DNA sequence from clone RP6-42F4 on chromosome 1, complete
            sequence
          Length = 15439

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  ctccaaaagctcaaagcatg 402
            ||||||||||||||||||||
Sbjct: 1594 ctccaaaagctcaaagcatg 1613
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>emb|AL596222.13| Human DNA sequence from clone RP11-114O18 on chromosome 1 Contains the 5'
              end of the NOTCH2 gene for Notch homolog 2 (Drosophila) and
              a CpG island, complete sequence
          Length = 107056

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ctccaaaagctcaaagcatg 402
              ||||||||||||||||||||
Sbjct: 106650 ctccaaaagctcaaagcatg 106669
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>emb|AL359758.15| Human DNA sequence from clone RP11-544O24 on chromosome 1 Contains the
             3' end of a SEC22 vesicle trafficking protein-like 1 (S.
             cerevisiae) (SEC22L1) pseudogene and a nudix (nucleoside
             diphosphate linked moiety X)-type motif 4 (NUDT4)
             pseudogene, complete sequence
          Length = 79661

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ctccaaaagctcaaagcatg 402
             ||||||||||||||||||||
Sbjct: 35107 ctccaaaagctcaaagcatg 35088
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>emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on chromosome 10 Contains a
              ribosomal protein L7 (RPL7) pseudogene, complete sequence
          Length = 200536

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    gagaagtataaaaaagaaaa 141
              ||||||||||||||||||||
Sbjct: 132440 gagaagtataaaaaagaaaa 132421
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>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    taaaagaaaattatgcaaaatttt 34
             ||||||| ||||||||||||||||
Sbjct: 64523 taaaagataattatgcaaaatttt 64546
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>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the
             CHC1L gene for chromosome condensation 1-like, 3 novel
             genes and a CpG island, complete sequence
          Length = 114519

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gagaagtataaaaaagaaaa 141
             ||||||||||||||||||||
Sbjct: 83863 gagaagtataaaaaagaaaa 83844
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>emb|AL034369.1|HSA149D17 Human DNA sequence from clone RP6-149D17 on chromosome Xq22.2-23
             Contains the gene for a novel protein similar to
             pancreatic lipase-related protein 2 (PNLIPRP2), the 5' end
             of the COL4A6 gene for type IV alpha 6 collagen and the 5'
             end of the COL4A5 gene for type IV alpha 5 collagen
             (Alport syndrome), complete sequence
          Length = 122157

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ctttcttttctgaaacaagg 112
             ||||||||||||||||||||
Sbjct: 27341 ctttcttttctgaaacaagg 27322
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>gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, complete sequence
          Length = 208877

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacacaacattaaaagaaaa 20
             ||||||||||||||||||||
Sbjct: 44760 aacacaacattaaaagaaaa 44779
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>emb|X97751.1|SCIV23 S.cerevisiae chrIV genes STE7, CLB3, MSH5, RPC53, RET1
          Length = 23096

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   ttctgggaaaatgaagaaga 225
             ||||||||||||||||||||
Sbjct: 16896 ttctgggaaaatgaagaaga 16877
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>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project)
          Length = 94319

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aaaaaagaaaacatcctatt 150
             ||||||||||||||||||||
Sbjct: 40476 aaaaaagaaaacatcctatt 40457
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aaaaaagaaaacatcctatt 150
             ||||||||||||||||||||
Sbjct: 28541 aaaaaagaaaacatcctatt 28522
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>emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 in linkage group 4
            Contains the ascl1a gene for achaete-scute complex-like
            1a (Drosophila), the gene for a novel protein similar to
            vertebrate RecQ protein-like DNA helicase Q1-like
            (RECQL), the gene for a novel protein similar to tyrosine
            hydroxylase (th), the pah gene for phenylalanine
            hydroxylase, the 5' end of the gene for a novel protein
            similar to vertebrate uncharacterized hematopoietic
            stem/progenitor cells protein MDS028 (MDS028) and a CpG
            island, complete sequence
          Length = 166242

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tgggaaaatgaagaagaaaa 228
            ||||||||||||||||||||
Sbjct: 3466 tgggaaaatgaagaagaaaa 3485
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>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence
          Length = 214098

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   gaaaactccccacagagctg 292
             ||||||||||||||||||||
Sbjct: 83466 gaaaactccccacagagctg 83447
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>gb|AC183687.3| Pan troglodytes BAC clone CH251-25N14 from chromosome 1, complete
              sequence
          Length = 192054

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    ctccaaaagctcaaagcatg 402
              ||||||||||||||||||||
Sbjct: 167708 ctccaaaagctcaaagcatg 167689
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>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 190858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  tcctcaaaccacttttcagc 248
            ||||||||||||||||||||
Sbjct: 7843 tcctcaaaccacttttcagc 7862
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>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence
          Length = 185819

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gagaagtataaaaaagaaaa 141
             ||||||||||||||||||||
Sbjct: 26079 gagaagtataaaaaagaaaa 26060
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>emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chromosome 9, complete
             sequence
          Length = 26133

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    tttcttttctgaaacaagga 113
             ||||||||||||||||||||
Sbjct: 15806 tttcttttctgaaacaagga 15825
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      taaaagaaaattatgcaaaatttt 34
               ||||||| ||||||||||||||||
Sbjct: 4999284 taaaagataattatgcaaaatttt 4999307
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 19       aattatgcaaaattttagat 38
                ||||||||||||||||||||
Sbjct: 35699023 aattatgcaaaattttagat 35699042
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gaaaatcctcaaaccacttt 243
             ||||||||||||||||||||
Sbjct: 62330 gaaaatcctcaaaccacttt 62311
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>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence
          Length = 169417

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aacacaacattaaaagaaaa 20
             ||||||||||||||||||||
Sbjct: 24192 aacacaacattaaaagaaaa 24211
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aagaaaattatgcaaaattt 33
             ||||||||||||||||||||
Sbjct: 40769 aagaaaattatgcaaaattt 40788
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aattatgcaaaattttagat 38
             ||||||||||||||||||||
Sbjct: 59637 aattatgcaaaattttagat 59656
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>emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in linkage group 24,
             complete sequence
          Length = 142977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   aaaaaagaaaacatcctattcttt 154
             |||||| |||||||||||||||||
Sbjct: 82494 aaaaaaaaaaacatcctattcttt 82517
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>emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in linkage group 4,
             complete sequence
          Length = 141185

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tgggaaaatgaagaagaaaa 228
             ||||||||||||||||||||
Sbjct: 59199 tgggaaaatgaagaagaaaa 59180
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>emb|Z82056.1|CET26H5 Caenorhabditis elegans Cosmid T26H5, complete sequence
          Length = 19736

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    ttaaaagaaaattatgcaaaattt 33
             ||||||||||||| ||||||||||
Sbjct: 15873 ttaaaagaaaattctgcaaaattt 15850
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>emb|Z74196.1|SCYDL148C S.cerevisiae chromosome IV reading frame ORF YDL148c
          Length = 3005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  ttctgggaaaatgaagaaga 225
            ||||||||||||||||||||
Sbjct: 1666 ttctgggaaaatgaagaaga 1647
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>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196431

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 213   aaaatgaagaagaaaatcctcaaa 236
             ||||| ||||||||||||||||||
Sbjct: 94938 aaaattaagaagaaaatcctcaaa 94915
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>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
              sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cacttttcagcatggaaaag 257
              ||||||||||||||||||||
Sbjct: 168711 cacttttcagcatggaaaag 168730
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>gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, complete sequence
          Length = 221568

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   atgaaaactccccacagagctgaa 294
             |||||||||| |||||||||||||
Sbjct: 23455 atgaaaactctccacagagctgaa 23478
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>dbj|AP004504.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034b,
             complete sequence
          Length = 35858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aacacaacattaaaagaaaa 20
             ||||||||||||||||||||
Sbjct: 26936 aacacaacattaaaagaaaa 26917
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>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete
              sequence
          Length = 173477

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    ataaaaaagaaaacatccta 148
              ||||||||||||||||||||
Sbjct: 154817 ataaaaaagaaaacatccta 154798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,895,039
Number of Sequences: 3902068
Number of extensions: 6895039
Number of successful extensions: 147562
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147260
Number of HSP's gapped (non-prelim): 302
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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