Clone Name	rbastl46c10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full ...	381	e-102
2	gb|AY109357.1| Zea mays CL881_1 mRNA sequence	172	7e-40
3	gb|AY111526.1| Zea mays CL881_3 mRNA sequence	143	6e-31
4	dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	8e-18
5	dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	8e-18
6	dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	8e-18
7	dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	8e-18
8	dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	8e-18
9	dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clon...	96	1e-16
10	dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clon...	96	1e-16
11	dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clon...	96	1e-16
12	ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa851...	92	2e-15
13	gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full...	88	3e-14
14	gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence	72	2e-09
15	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	72	2e-09
16	dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D...	72	2e-09
17	gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds	66	1e-07
18	gb|AY104211.1| Zea mays PCO124720 mRNA sequence	60	7e-06
19	gb|BT018108.1| Zea mays clone EL01N0553E01.c mRNA sequence	56	1e-04
20	ref|XM_477327.1| Oryza sativa (japonica cultivar-group), mRNA	52	0.002
21	gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pin...	52	0.002
22	gb|AY072819.1| Oryza sativa zwille/pinhead-like protein mRNA, pa...	52	0.002
23	dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.002
24	ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G270...	50	0.007
25	gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 prot...	50	0.007
26	gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) pr...	50	0.007
27	emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Co...	50	0.007
28	emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4,...	46	0.10
29	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.10
30	gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete se...	44	0.41
31	gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete seq...	44	0.41
32	ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 ...	42	1.6
33	emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chr...	42	1.6
34	emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on ch...	42	1.6
35	gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno...	42	1.6
36	gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, comple...	42	1.6
37	gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, comp...	42	1.6
38	gb|AC022882.5|AC022882 Homo sapiens chromosome 11, clone RP11-44...	42	1.6
39	gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete...	42	1.6
40	dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone...	42	1.6
41	gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete s...	40	6.4
42	emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chr...	40	6.4
43	dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D...	40	6.4
44	dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.4

---

>gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full insert mRNA sequence
          Length = 2815

 Score =  381 bits (192), Expect = e-102
 Identities = 260/283 (91%), Gaps = 6/283 (2%)
 Strand = Plus / Minus

                                                                        
Query: 197  aagcgcatcaccaaaagttggaacgcgcaagtgcgactagc------gctcagcaggaga 250
            ||||||||||||||||||||||||||||||||||| || ||      ||||||||| |||
Sbjct: 2620 aagcgcatcaccaaaagttggaacgcgcaagtgcggctggctggctggctcagcagaaga 2561

                                                                        
Query: 251  acatgctgctgcggactttctcatggagacgaggcagctcctgcaccgggccgctggcag 310
            |||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||| | |
Sbjct: 2560 acatgctgctgcggactttctcatggaggcgaggcagctcctgcactggagcgctgccgg 2501

                                                                        
Query: 311  tagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatcaaactttatga 370
             ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2500 cagaggtgtggccaccgccctggctcgacgacgtctcagacatctcatcaaactttatga 2441

                                                                        
Query: 371  actgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattg 430
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 2440 actgcgccacctgagcagccgcaagatgtgcatagcagattggagaaacaactgatatgg 2381

                                                       
Query: 431  ctgttgtgctcctttggtacacataagagagcgaatgcacaag 473
            |||| |||||||||||||||||||| |||||||| ||||||||
Sbjct: 2380 ctgtcgtgctcctttggtacacatatgagagcgagtgcacaag 2338



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 79/89 (88%), Gaps = 3/89 (3%)
 Strand = Plus / Minus

                                                                        
Query: 84   caaaggttctgaggcaccaaagtgtggcagcaagcttaggaacacaacatcccaggtgtc 143
            |||||||||||||||||||| |||  ||| | |||||||||||||||||||||||| |||
Sbjct: 2728 caaaggttctgaggcaccaa-gtgcagcaaccagcttaggaacacaacatcccaggagtc 2670

                                         
Query: 144  caacaggtcatcaaaggggccactactac 172
            ||||||| ||||| |  ||||||||||||
Sbjct: 2669 caacaggccatcaca--ggccactactac 2643

---

>gb|AY109357.1| Zea mays CL881_1 mRNA sequence
          Length = 3158

 Score =  172 bits (87), Expect = 7e-40
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                        
Query: 340  gacgtctcggacatctcatcaaactttatgaactgcgccacctgagcagctgcaagatgt 399
            |||||||| ||||||||||| ||||||||||||||  | |||||||||||||| ||||||
Sbjct: 2743 gacgtctccgacatctcatcgaactttatgaactggccaacctgagcagctgccagatgt 2684

                                                                        
Query: 400  gcatagcagattggagaaacaactgatattgctgttgtgctcctttggtacacataagag 459
            || |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 2683 gcgtagcagatgggagcaacgactgatatggctgttgtgctcctttggtacacataagag 2624

                       
Query: 460  agcgaatgcac 470
            |||||||||||
Sbjct: 2623 agcgaatgcac 2613

---

>gb|AY111526.1| Zea mays CL881_3 mRNA sequence
          Length = 628

 Score =  143 bits (72), Expect = 6e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                       
Query: 343 gtctcggacatctcatcaaactttatgaactgcgccacctgagcagctgcaagatgtgca 402
           ||||| |||||||| || ||||||||||||||| | ||||| || |||||||| || || 
Sbjct: 239 gtctccgacatctcgtcgaactttatgaactgcccaacctgggcggctgcaaggtgggcg 180

                                                                       
Query: 403 tagcagattggagaaacaactgatattgctgttgtgctcctttggtacacataagagagc 462
           |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 179 tagcagatgggagcaacaactgatatggctgttgtgctcctttggtacacataagagagc 120

                   
Query: 463 gaatgcac 470
           || |||||
Sbjct: 119 gagtgcac 112



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 238 gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
           ||||||||| ||||||||  ||| |  ||||||||||| ||||| ||||||||||| || 
Sbjct: 341 gctcagcagaagaacatggagctcctcactttctcatgcagacggggcagctcctggaca 282

                    
Query: 298 gggccgctg 306
           ||| |||||
Sbjct: 281 gggacgctg 273

---

>dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full
            insert sequence
          Length = 3385

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 436
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 2903 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 2844

                                              
Query: 437  tgctcctttggtacacataagagagcgaatgcac 470
            |||| || || |||||||||||||| || |||||
Sbjct: 2843 tgcttctctgatacacataagagagtgagtgcac 2810



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 265  actttctcatggagacgaggcagctcctgcaccgg 299
            |||||||||||||| |||||||||||  |||||||
Sbjct: 3012 actttctcatggaggcgaggcagctcaggcaccgg 2978

---

>dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C06, full
            insert sequence
          Length = 1885

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 436
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 1451 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 1392

                                              
Query: 437  tgctcctttggtacacataagagagcgaatgcac 470
            |||| || || |||||||||||||| || |||||
Sbjct: 1391 tgcttctctgatacacataagagagtgagtgcac 1358



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 265  actttctcatggagacgaggcagctcctgcaccgg 299
            |||||||||||||| |||||||||||  |||||||
Sbjct: 1560 actttctcatggaggcgaggcagctcaggcaccgg 1526

---

>dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H02, full
           insert sequence
          Length = 1196

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 377 ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 436
           ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 762 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 703

                                             
Query: 437 tgctcctttggtacacataagagagcgaatgcac 470
           |||| || || |||||||||||||| || |||||
Sbjct: 702 tgcttctctgatacacataagagagtgagtgcac 669



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 265 actttctcatggagacgaggcagctcctgcaccgg 299
           |||||||||||||| |||||||||||  |||||||
Sbjct: 871 actttctcatggaggcgaggcagctcaggcaccgg 837

---

>dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full
            insert sequence
          Length = 3178

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 377  ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 436
            ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 2721 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 2662

                                              
Query: 437  tgctcctttggtacacataagagagcgaatgcac 470
            |||| || || |||||||||||||| || |||||
Sbjct: 2661 tgcttctctgatacacataagagagtgagtgcac 2628



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 265  actttctcatggagacgaggcagctcctgcaccgg 299
            |||||||||||||| |||||||||||  |||||||
Sbjct: 2830 actttctcatggaggcgaggcagctcaggcaccgg 2796

---

>dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F07, full
           insert sequence
          Length = 1196

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                       
Query: 377 ccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttg 436
           ||||||||||||| |||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct: 762 ccacctgagcagcagcaagatgggcatagcaaatcggagcaacaactgatatggctgttg 703

                                             
Query: 437 tgctcctttggtacacataagagagcgaatgcac 470
           |||| || || |||||||||||||| || |||||
Sbjct: 702 tgcttctctgatacacataagagagtgagtgcac 669



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 265 actttctcatggagacgaggcagctcctgcaccgg 299
           |||||||||||||| |||||||||||  |||||||
Sbjct: 871 actttctcatggaggcgaggcagctcaggcaccgg 837

---

>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full
            insert sequence
          Length = 3027

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 176/218 (80%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                        
Query: 238  gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
            ||||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 2865 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 2806

                                                                        
Query: 298  gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 357
            ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 2805 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 2749

                                                                        
Query: 358  tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 417
            || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 2748 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2689

                                                  
Query: 418  acaactgatattgctgttgtgctcctttggtacacata 455
            || |||||||| ||||| |||||||| ||||| |||||
Sbjct: 2688 acgactgatatggctgtagtgctcctctggtagacata 2651

---

>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full
            insert sequence
          Length = 3047

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 176/218 (80%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                        
Query: 238  gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
            ||||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 2875 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 2816

                                                                        
Query: 298  gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 357
            ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 2815 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 2759

                                                                        
Query: 358  tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 417
            || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 2758 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 2699

                                                  
Query: 418  acaactgatattgctgttgtgctcctttggtacacata 455
            || |||||||| ||||| |||||||| ||||| |||||
Sbjct: 2698 acgactgatatggctgtagtgctcctctggtagacata 2661

---

>dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H03, full
           insert sequence
          Length = 772

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 176/218 (80%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                       
Query: 238 gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
           ||||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 574 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 515

                                                                       
Query: 298 gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 357
           ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 514 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 458

                                                                       
Query: 358 tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaa 417
           || ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |
Sbjct: 457 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgca 398

                                                 
Query: 418 acaactgatattgctgttgtgctcctttggtacacata 455
           || |||||||| ||||| |||||||| ||||| |||||
Sbjct: 397 acgactgatatggctgtagtgctcctctggtagacata 360

---

>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA
          Length = 2715

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 174/216 (80%), Gaps = 3/216 (1%)
 Strand = Plus / Minus

                                                                        
Query: 240  tcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 299
            ||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||||
Sbjct: 2715 tcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcaccgg 2656

                                                                        
Query: 300  gccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatc 359
              ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| ||
Sbjct: 2655 agcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcgtc 2599

                                                                        
Query: 360  aaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaac 419
             ||||| ||||||||    ||||||||||| || ||||| || ||||| || || | |||
Sbjct: 2598 gaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagcaaatgggtgcaac 2539

                                                
Query: 420  aactgatattgctgttgtgctcctttggtacacata 455
             |||||||| ||||| |||||||| ||||| |||||
Sbjct: 2538 gactgatatggctgtagtgctcctctggtagacata 2503

---

>gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full insert mRNA
            sequence
          Length = 1565

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 110/132 (83%)
 Strand = Plus / Minus

                                                                        
Query: 240  tcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcaccgg 299
            ||||||| ||||||||  ||| |  |||||||| || || |||||||||||| |||||||
Sbjct: 1171 tcagcagaagaacatggagctcctcactttctcgtgcagccgaggcagctccggcaccgg 1112

                                                                        
Query: 300  gccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctcatc 359
            | ||||| | | ||| |||||||| || ||||||||||||||||| || ||||| || ||
Sbjct: 1111 ggcgctgcccgcagacgtgtggccccctccctggctcgacgacgtgtccgacatgtcctc 1052

                        
Query: 360  aaactttatgaa 371
            |||||| |||||
Sbjct: 1051 aaacttcatgaa 1040



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 421 actgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaa 472
           |||||||| || || |||||||| ||||||||||| |||||||| |||||||
Sbjct: 990 actgatatcgccgtcgtgctcctctggtacacataggagagcgagtgcacaa 939

---

>gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence
          Length = 3104

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                        
Query: 382  tgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgctc 441
            |||| ||| |||||||| ||||| ||||| |||| |||||| |||||||| || ||||| 
Sbjct: 2703 tgagtagcagcaagatgggcataacagataggagcaacaacagatattgcagtggtgctt 2644

                                
Query: 442  ctttggtacacataagagag 461
            || |||||||||||||||||
Sbjct: 2643 ctctggtacacataagagag 2624

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 137/170 (80%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                           
Query: 238     gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
               ||||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 9630504 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 9630563

                                                                           
Query: 298     gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 357
               ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 9630564 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 9630620

                                                                 
Query: 358     tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagca 407
               || ||||| ||||||||    ||||||||||| || ||||| || |||||
Sbjct: 9630621 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagca 9630670



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 202      catcaccaaaagttggaacg 221
                ||||||||||||||||||||
Sbjct: 21143571 catcaccaaaagttggaacg 21143552

---

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0038F12
          Length = 190014

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 137/170 (80%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                         
Query: 238   gctcagcaggagaacatgctgctgcggactttctcatggagacgaggcagctcctgcacc 297
             ||||||||| ||||||||  ||| | |||||| | ||| || |||||||||||  |||||
Sbjct: 68507 gctcagcagaagaacatggagctcctgactttgttatgcaggcgaggcagctcgggcacc 68566

                                                                         
Query: 298   gggccgctggcagtagaggtgtggccaccaccctggctcgacgacgtctcggacatctca 357
             ||  ||||| | |  ||||| |||||||||   ||||||||||||||||| |||||||| 
Sbjct: 68567 ggagcgctgcccgccgaggtatggccacca---tggctcgacgacgtctccgacatctcg 68623

                                                               
Query: 358   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagca 407
             || ||||| ||||||||    ||||||||||| || ||||| || |||||
Sbjct: 68624 tcgaacttgatgaactggctgacctgagcagcagcgagatgcgcgtagca 68673

---

>gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds
          Length = 2715

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 406  cagattggagaaacaactgatattgctgttgtgctcctttggtacacataaga 458
            ||||| |||| |||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 2555 cagatgggagcaacaacagatattgcagttgtgctcctttggtagacataaga 2503

---

>gb|AY104211.1| Zea mays PCO124720 mRNA sequence
          Length = 2052

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 411  tggagaaacaactgatattgctgttgtgctcctttggtacacataagagagcgaatgcac 470
            ||||| ||| ||||| || ||||| |||||||| |||||||| |||||||||||||| ||
Sbjct: 1697 tggagcaaccactgagatggctgtcgtgctcctctggtacacgtaagagagcgaatgaac 1638

              
Query: 471  aa 472
            ||
Sbjct: 1637 aa 1636

---

>gb|BT018108.1| Zea mays clone EL01N0553E01.c mRNA sequence
          Length = 1267

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 421 actgatattgctgttgtgctcctttggtacacataagagagcgaatgcacaa 472
           ||||| || ||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 896 actgagatggctgtcgtgctcctctggtacacgtaagagagcgaatgaacaa 845

---

>ref|XM_477327.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2670

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                        
Query: 367  atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 426
            ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 2546 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 2487

                                                  
Query: 427  attgctgttgtgctcctttggtacacataagagagcga 464
            ||||| || |||||||| || ||||||||||| |||||
Sbjct: 2486 attgcagtggtgctcctctgatacacataagaaagcga 2449

---

>gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pinhead-like protein
           (ZP1) mRNA, complete cds
          Length = 1407

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 367 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 426
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 982 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 923

                                                 
Query: 427 attgctgttgtgctcctttggtacacataagagagcga 464
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 922 attgcagtggtgctcctctgatacacataagaaagcga 885

---

>gb|AY072819.1| Oryza sativa zwille/pinhead-like protein mRNA, partial cds
          Length = 879

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 367 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 426
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 453 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 394

                                                 
Query: 427 attgctgttgtgctcctttggtacacataagagagcga 464
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 393 attgcagtggtgctcctctgatacacataagaaagcga 356

---

>dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G22, full
           insert sequence
          Length = 1211

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 367 atgaactgcgccacctgagcagctgcaagatgtgcatagcagattggagaaacaactgat 426
           ||||||||  ||| ||| || ||||| ||||| ||||| ||||| || |  ||||| |||
Sbjct: 808 atgaactggcccatctgcgctgctgcgagatgagcataacagataggtgccacaacagat 749

                                                 
Query: 427 attgctgttgtgctcctttggtacacataagagagcga 464
           ||||| || |||||||| || ||||||||||| |||||
Sbjct: 748 attgcagtggtgctcctctgatacacataagaaagcga 711

---

>ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) AT2G27040 (AGO4) mRNA,
            complete cds
          Length = 3166

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 440
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2767 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2708

                                             
Query: 441  cctttggtacacataagagagcgaatgcacaag 473
             |||||||||||||| |||||||| || |||||
Sbjct: 2707 tctttggtacacataggagagcgagtggacaag 2675

---

>gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
            mRNA, complete cds
          Length = 2806

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 440
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2637 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2578

                                             
Query: 441  cctttggtacacataagagagcgaatgcacaag 473
             |||||||||||||| |||||||| || |||||
Sbjct: 2577 tctttggtacacataggagagcgagtggacaag 2545

---

>gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
            mRNA, complete cds
          Length = 3171

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 440
            |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 2767 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 2708

                                             
Query: 441  cctttggtacacataagagagcgaatgcacaag 473
             |||||||||||||| |||||||| || |||||
Sbjct: 2707 tctttggtacacataggagagcgagtggacaag 2675

---

>emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZA02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 838

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                       
Query: 381 ctgagcagctgcaagatgtgcatagcagattggagaaacaactgatattgctgttgtgct 440
           |||||||||||| |  || ||||||||||| || | |||||| || || ||  | |||||
Sbjct: 481 ctgagcagctgccaagtgagcatagcagatcggcgcaacaacagaaatggcactggtgct 422

                                            
Query: 441 cctttggtacacataagagagcgaatgcacaag 473
            |||||||||||||| |||||||| || |||||
Sbjct: 421 tctttggtacacataggagagcgagtggacaag 389

---

>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
              complete sequence
          Length = 127419

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 377    ccacctgagcagctgcaagatgtgcatagca 407
              ||||||||||||| |||||||| ||||||||
Sbjct: 121910 ccacctgagcagcagcaagatgggcatagca 121940



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 265    actttctcatggagacgaggcagctcctgcaccgg 299
              |||||||||||||| |||||||||||  |||||||
Sbjct: 121801 actttctcatggaggcgaggcagctcaggcaccgg 121835

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 377     ccacctgagcagctgcaagatgtgcatagca 407
               ||||||||||||| |||||||| ||||||||
Sbjct: 3532615 ccacctgagcagcagcaagatgggcatagca 3532645



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 265     actttctcatggagacgaggcagctcctgcaccgg 299
               |||||||||||||| |||||||||||  |||||||
Sbjct: 3532506 actttctcatggaggcgaggcagctcaggcaccgg 3532540

---

>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence
          Length = 124069

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 358   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggag 415
             |||||||| ||||||||  |||| |||| ||| || | ||| ||||||||||||||||
Sbjct: 73512 tcaaacttcatgaactgtcccacttgagaagcagccaaatgggcatagcagattggag 73569

---

>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence
          Length = 96063

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358   tcaaactttatgaactgcgccacctgagcagctgcaagatgtgcatagcagattggag 415
             |||||||| ||||||||  |||| |||| ||| || | ||| ||||||||||||||||
Sbjct: 80364 tcaaacttcatgaactgtcccacttgagaagcagccaaatgggcatagcagattggag 80307

---

>ref|NM_128854.2| Arabidopsis thaliana unknown protein AT2G32940 mRNA, complete cds
          Length = 2637

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 358  tcaaactttatgaactgcgccacctgagcagctgcaagatg 398
            ||||||||| |||| ||||| || ||||| |||||||||||
Sbjct: 2558 tcaaactttgtgaattgcgcaacttgagctgctgcaagatg 2518

---

>emb|AL590640.19| Human DNA sequence from clone RP11-40H20 on chromosome 1 Contains the 5'
              end of the SLC9A1 gene for solute carrier family 9
              (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+,
              amiloride sensitive), a ribosomal protein L18a (RPL18A)
              pseudogene, a novel pseudogene (FLJ20420), a nucleophosmin
              (nucleolar phosphoprotein B23, numatrin)(NPM1) pseudogene,
              a mall nuclear ribonucleoprotein polypeptide E (SNRPE)
              pseudogene, a novel gene, the 5' end of a novel gene
              (KIAA1037) and a CpG island, complete sequence
          Length = 147052

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 409    attggagaaacaactgatatt 429
              |||||||||||||||||||||
Sbjct: 113826 attggagaaacaactgatatt 113806

---

>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete
              sequence
          Length = 192780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    attggagaaacaactgatatt 429
              |||||||||||||||||||||
Sbjct: 117708 attggagaaacaactgatatt 117728

---

>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence, complete
             sequence
          Length = 96801

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 358   tcaaactttatgaactgcgccacctgagcagctgcaagatg 398
             ||||||||| |||| ||||| || ||||| |||||||||||
Sbjct: 51188 tcaaactttgtgaattgcgcaacttgagctgctgcaagatg 51148

---

>gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, complete sequence
          Length = 202847

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 427   attgctgttgtgctcctttgg 447
             |||||||||||||||||||||
Sbjct: 43796 attgctgttgtgctcctttgg 43816

---

>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   attggagaaacaactgatatt 429
             |||||||||||||||||||||
Sbjct: 85987 attggagaaacaactgatatt 85967

---

>gb|AC022882.5|AC022882 Homo sapiens chromosome 11, clone RP11-444K7, complete sequence
          Length = 174469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 409   attggagaaacaactgatatt 429
             |||||||||||||||||||||
Sbjct: 90207 attggagaaacaactgatatt 90227

---

>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence
          Length = 157285

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 350    acatctcatcaaactttatga 370
              |||||||||||||||||||||
Sbjct: 140262 acatctcatcaaactttatga 140282

---

>dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031,
             complete sequence
          Length = 97191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 391   gcaagatgtgcatagcagattggag 415
             |||||||| ||||||||||||||||
Sbjct: 60546 gcaagatgagcatagcagattggag 60522

---

>gb|AC134242.17| Medicago truncatula clone mth2-10p20, complete sequence
          Length = 115005

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   ctgatattgctgttgtgctc 441
             ||||||||||||||||||||
Sbjct: 94016 ctgatattgctgttgtgctc 94035

---

>emb|AL139137.15| Human DNA sequence from clone RP11-58O13 on chromosome 1, complete
             sequence
          Length = 137269

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   ttggagaaacaactgatatt 429
             ||||||||||||||||||||
Sbjct: 10252 ttggagaaacaactgatatt 10233

---

>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144D11
          Length = 157943

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    catcaccaaaagttggaacg 221
              ||||||||||||||||||||
Sbjct: 111116 catcaccaaaagttggaacg 111097

---

>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1064G04
          Length = 186704

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   catcaccaaaagttggaacg 221
             ||||||||||||||||||||
Sbjct: 41080 catcaccaaaagttggaacg 41061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,683,839
Number of Sequences: 3902068
Number of extensions: 3683839
Number of successful extensions: 64748
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64597
Number of HSP's gapped (non-prelim): 140
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---