ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-8... 48 0.010
2gb|AC016670.7| Homo sapiens BAC clone RP11-11K6 from 2, complete... 42 0.63
3emb|BX537769.1|HSM805855 Homo sapiens mRNA; cDNA DKFZp781B1340 (... 42 0.63
4emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 i... 42 0.63
5gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital ... 40 2.5
6emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chr... 40 2.5
7gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 40 2.5
8gb|AF195939.1|AF195939 Solanum tuberosum disease resistance prot... 40 2.5
9gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, com... 38 9.8
10gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.8
11gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome ... 38 9.8
12gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 38 9.8
13gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p... 38 9.8
14gb|AC108412.8| Mus musculus chromosome 1, clone RP24-266K12, com... 38 9.8
15gb|DQ497630.1| Bos taurus clone P542 immunoglobulin heavy chain ... 38 9.8
16gb|DQ497629.1| Bos taurus clone P522 immunoglobulin heavy chain ... 38 9.8
17gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome... 38 9.8
18gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, comp... 38 9.8
19gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, com... 38 9.8
20emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 i... 38 9.8
21gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosom... 38 9.8
22ref|XM_652401.1| Entamoeba histolytica HM-1:IMSS BspA-like leuci... 38 9.8
23gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete se... 38 9.8
24emb|AL807761.8| Human DNA sequence from clone RP11-196I18 on chr... 38 9.8
25emb|AL672187.12| Human DNA sequence from clone RP11-592B15 on ch... 38 9.8
26emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chro... 38 9.8
27emb|AL445989.17| Human DNA sequence from clone RP11-473M10 on ch... 38 9.8
28emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chro... 38 9.8
29emb|AL157774.14| Human DNA sequence from clone RP11-442L12 on ch... 38 9.8
30emb|AL137179.14| Human DNA sequence from clone RP11-82M9 on chro... 38 9.8
31emb|BX927311.7| Zebrafish DNA sequence from clone CH211-235E15 i... 38 9.8
32gb|AC012044.15| Homo sapiens chromosome 10 clone RP11-175I17, co... 38 9.8
33gb|AY129465.1| Homo sapiens polycystic kidney and hepatic diseas... 38 9.8
34gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, co... 38 9.8
35gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 38 9.8
36gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosom... 38 9.8
37gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map... 38 9.8
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
41gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete ... 38 9.8
42dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
43dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
44gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, com... 38 9.8
45gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 38 9.8
46gb|AF411241.1| Bos taurus Ig Cmu C-delta gene, intron sequence 38 9.8
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.8
48gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, compl... 38 9.8
49gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, comple... 38 9.8
50emb|AL929343.7| Zebrafish DNA sequence from clone CH211-144G12, ... 38 9.8
51gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3... 38 9.8
52gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 38 9.8
53gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p... 38 9.8 
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence
          Length = 127331

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 9      gtcaaaaatagctttattgatttg 32
              ||||||||||||||||||||||||
Sbjct: 111614 gtcaaaaatagctttattgatttg 111637
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>gb|AC016670.7| Homo sapiens BAC clone RP11-11K6 from 2, complete sequence
          Length = 148415

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    ttttctagctaattgagcaag 102
             |||||||||||||||||||||
Sbjct: 98643 ttttctagctaattgagcaag 98663
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>emb|BX537769.1|HSM805855 Homo sapiens mRNA; cDNA DKFZp781B1340 (from clone DKFZp781B1340);
           complete cds
          Length = 2900

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  ttttctagctaattgagcaag 102
           |||||||||||||||||||||
Sbjct: 131 ttttctagctaattgagcaag 151
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>emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 in linkage group 7,
             complete sequence
          Length = 145555

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   acacactgacacactccccac 141
             |||||||||||||||||||||
Sbjct: 97897 acacactgacacactccccac 97877
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>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 180339

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     taaacaacagtaacgtcatt 54
              ||||||||||||||||||||
Sbjct: 150474 taaacaacagtaacgtcatt 150455
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>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the
              5'end of the protein tyrosine phosphatase (non-receptor
              type 3) gene, a novel pseudogene, apseudogene similar to
              mouse Ybox transcription factor and a CpG island, complete
              sequence
          Length = 189367

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     aaaaatagctttattgattt 31
              ||||||||||||||||||||
Sbjct: 127589 aaaaatagctttattgattt 127608
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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 15     aatagctttattgatttgattaaa 38
              |||||||||||||||||| |||||
Sbjct: 146406 aatagctttattgatttggttaaa 146429



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    aatagctttattgatttgattaaa 38
             |||| |||||||||||||||||||
Sbjct: 67716 aatatctttattgatttgattaaa 67739
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>gb|AF195939.1|AF195939 Solanum tuberosum disease resistance protein Gpa2 gene, complete cds
          Length = 10331

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 15   aatagctttattgatttgattaaa 38
            |||||||||||||||||| |||||
Sbjct: 9976 aatagctttattgatttggttaaa 9953
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>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence
          Length = 195530

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 114  ctgtattacacactgacacactc 136
            |||||||||||||||||| ||||
Sbjct: 8235 ctgtattacacactgacaaactc 8213
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>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09
              map near S6115, complete sequence
          Length = 215240

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 9      gtcaaaaatagctttattgattt 31
              ||||||| |||||||||||||||
Sbjct: 211196 gtcaaaactagctttattgattt 211218
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>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence
          Length = 240812

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     tttatttcttttctagcta 92
              |||||||||||||||||||
Sbjct: 228959 tttatttcttttctagcta 228977
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   ttacacactgacacactcc 137
             |||||||||||||||||||
Sbjct: 47383 ttacacactgacacactcc 47365
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>gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p11.4, complete sequence
          Length = 170219

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    ttacacactgacacactcc 137
              |||||||||||||||||||
Sbjct: 105748 ttacacactgacacactcc 105730
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>gb|AC108412.8| Mus musculus chromosome 1, clone RP24-266K12, complete sequence
          Length = 160264

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 71     aagtttatttcttttctag 89
              |||||||||||||||||||
Sbjct: 141580 aagtttatttcttttctag 141598
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>gb|DQ497630.1| Bos taurus clone P542 immunoglobulin heavy chain gene, partial cds
          Length = 4572

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 175  cctgggcggattcctccga 193
            |||||||||||||||||||
Sbjct: 1751 cctgggcggattcctccga 1733
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>gb|DQ497629.1| Bos taurus clone P522 immunoglobulin heavy chain gene, partial cds
          Length = 4616

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 175  cctgggcggattcctccga 193
            |||||||||||||||||||
Sbjct: 1754 cctgggcggattcctccga 1736
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>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence
          Length = 242229

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 120    tacacactgacacactccc 138
              |||||||||||||||||||
Sbjct: 180157 tacacactgacacactccc 180139
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>gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, complete sequence
          Length = 237076

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 71     aagtttatttcttttctag 89
              |||||||||||||||||||
Sbjct: 236073 aagtttatttcttttctag 236055
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>gb|AC163995.4| Mus musculus chromosome 5, clone RP24-242C19, complete sequence
          Length = 177877

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 114    ctgtattacacactgacacactc 136
              |||||||||||||||||| ||||
Sbjct: 131029 ctgtattacacactgacaaactc 131007
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>emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 in linkage group 6,
             complete sequence
          Length = 236737

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    ctttattgatttgattaaa 38
             |||||||||||||||||||
Sbjct: 82266 ctttattgatttgattaaa 82284
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>gb|AC122421.4| Mus musculus BAC clone RP24-169J24 from chromosome 6, complete sequence
          Length = 154134

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    aaaatagctttattgattt 31
             |||||||||||||||||||
Sbjct: 55239 aaaatagctttattgattt 55257
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>ref|XM_652401.1| Entamoeba histolytica HM-1:IMSS BspA-like leucine rich repeat
           protein (1.t00108) partial mRNA
          Length = 960

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  attgatttgattaaacaac 42
           |||||||||||||||||||
Sbjct: 461 attgatttgattaaacaac 443
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>gb|AC124214.8| Medicago truncatula clone mth2-36a23, complete sequence
          Length = 118803

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    attgatttgattaaacaac 42
             |||||||||||||||||||
Sbjct: 88728 attgatttgattaaacaac 88746
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>emb|AL807761.8| Human DNA sequence from clone RP11-196I18 on chromosome 9 Contains the
             5' end of a novel gene (FLJ40387), a novel pseudogene, a
             MMRP19 pseudogene and a novel gene, complete sequence
          Length = 103861

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    aaaaatagctttattgatt 30
             |||||||||||||||||||
Sbjct: 48351 aaaaatagctttattgatt 48333
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>emb|AL672187.12| Human DNA sequence from clone RP11-592B15 on chromosome 10 Contains the
             gene for a novel protein similar to ARF GTPase-activating
             protein (MRIP2), a poly (ADP-ribose) glycohydrolase (PARG)
             pseudogene, a novel gene, gene LOC347774, a novel gene, a
             ribosomal protein L35a (RPL35A) pseudogene, the TIMM23B
             gene for translocase of inner mitochondrial membrane 23
             homolog B (yeast) and two CpG islands, complete sequence
          Length = 211435

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    tcaaaaatagctttattga 28
             |||||||||||||||||||
Sbjct: 14513 tcaaaaatagctttattga 14495
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>emb|AL591398.2| Human DNA sequence from clone RP11-81C12 on chromosome X Contains a
             pseudogene similar to part of mothers against
             decapentaplegic (MAD) homolog (Drosophila) interacting
             protein receptor activation anchor (MADHIP), complete
             sequence
          Length = 89973

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    tgcaagtttatttcttttc 86
             |||||||||||||||||||
Sbjct: 30430 tgcaagtttatttcttttc 30448
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>emb|AL445989.17| Human DNA sequence from clone RP11-473M10 on chromosome 13 Contains
            two novel genes and a pseudogene similar to part of
            olfactory receptor proteins, complete sequence
          Length = 163218

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 12   aaaaatagctttattgatttgat 34
            ||||||||||| |||||||||||
Sbjct: 6749 aaaaatagcttcattgatttgat 6727
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>emb|AL158043.14| Human DNA sequence from clone RP11-5N23 on chromosome 10p14-15.3 Contains
              the 5' end of the PRKCQ gene for protein kinase C, theta, a
              novel gene and a CpG island, complete sequence
          Length = 132741

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     gtttatttcttttctagct 91
              |||||||||||||||||||
Sbjct: 103036 gtttatttcttttctagct 103018
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>emb|AL157774.14| Human DNA sequence from clone RP11-442L12 on chromosome 6 Contains part
             of the PKHD1 gene for polycystic kidney and hepatic
             disease 1 (autosomal recessive) (TIG multiple domains-1,
             FCYT, ARPKD) and a CpG island, complete sequence
          Length = 154055

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    atttcttttctagctaatt 95
             |||||||||||||||||||
Sbjct: 39220 atttcttttctagctaatt 39238
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>emb|AL137179.14| Human DNA sequence from clone RP11-82M9 on chromosome 6 Contains part of
              the GMDS gene for GDP-mannose 4 6-dehydratase, complete
              sequence
          Length = 153053

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     tcttttctagctaattgag 98
              |||||||||||||||||||
Sbjct: 134226 tcttttctagctaattgag 134208
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>emb|BX927311.7| Zebrafish DNA sequence from clone CH211-235E15 in linkage group 24,
             complete sequence
          Length = 162570

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 21    tttattgatttgattaaacaaca 43
             |||||||||||| ||||||||||
Sbjct: 84506 tttattgatttgtttaaacaaca 84484
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>gb|AC012044.15| Homo sapiens chromosome 10 clone RP11-175I17, complete sequence
          Length = 172110

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     tcaaaaatagctttattga 28
              |||||||||||||||||||
Sbjct: 128670 tcaaaaatagctttattga 128688
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>gb|AY129465.1| Homo sapiens polycystic kidney and hepatic disease 1 (PKHD1) gene,
              complete cds, alternatively spliced
          Length = 469514

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     atttcttttctagctaatt 95
              |||||||||||||||||||
Sbjct: 364580 atttcttttctagctaatt 364562
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>gb|AC134399.12| Mus musculus chromosome 5, clone RP24-282I19, complete sequence
          Length = 155228

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 114   ctgtattacacactgacacactc 136
             |||||||||||||||||| ||||
Sbjct: 64343 ctgtattacacactgacaaactc 64365
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 15      aatagctttattgatttga 33
               |||||||||||||||||||
Sbjct: 1860251 aatagctttattgatttga 1860233
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>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence
          Length = 139613

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 120   tacacactgacacactccc 138
             |||||||||||||||||||
Sbjct: 58688 tacacactgacacactccc 58706
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>gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map 3p, complete sequence
          Length = 222542

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaatagctttattgatt 30
              |||||||||||||||||||
Sbjct: 112804 aaaaatagctttattgatt 112822
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 9        gtcaaaaatagctttattgattt 31
                ||||||| |||||||||||||||
Sbjct: 12828520 gtcaaaactagctttattgattt 12828542
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 9       gtcaaaaatagctttattgattt 31
               ||||||| |||||||||||||||
Sbjct: 9634483 gtcaaaactagctttattgattt 9634505
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 24       attgatttgattaaacaacagta 46
                ||||||||||||||| |||||||
Sbjct: 11752867 attgatttgattaaaaaacagta 11752889
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>gb|AC010956.12|AC010956 Homo sapiens, clone RP11-5N23, complete sequence
          Length = 163805

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     gtttatttcttttctagct 91
              |||||||||||||||||||
Sbjct: 134101 gtttatttcttttctagct 134083
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>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     gtcaaaaatagctttattgattt 31
             ||||||| |||||||||||||||
Sbjct: 98701 gtcaaaactagctttattgattt 98723
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>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1011A07
          Length = 150590

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 24    attgatttgattaaacaacagta 46
             ||||||||||||||| |||||||
Sbjct: 92035 attgatttgattaaaaaacagta 92057
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>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence
          Length = 228068

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 112    cactgtattacacactgacacac 134
              |||||||| ||||||||||||||
Sbjct: 126194 cactgtatgacacactgacacac 126172
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 15     aatagctttattgatttgattaa 37
              ||||||||||||||||| |||||
Sbjct: 372034 aatagctttattgatttcattaa 372056
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>gb|AF411241.1| Bos taurus Ig Cmu C-delta gene, intron sequence
          Length = 5160

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 175  cctgggcggattcctccga 193
            |||||||||||||||||||
Sbjct: 1703 cctgggcggattcctccga 1685
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 9        gtcaaaaatagctttattgattt 31
                ||||||| |||||||||||||||
Sbjct: 12907827 gtcaaaactagctttattgattt 12907849
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>gb|AC140403.3| Mus musculus BAC clone RP23-144M22 from 15, complete sequence
          Length = 192144

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 113   actgtattacacactgacacact 135
             ||||||| |||||||||||||||
Sbjct: 27425 actgtatgacacactgacacact 27403
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>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence
          Length = 215042

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    tttatttcttttctagcta 92
             |||||||||||||||||||
Sbjct: 84793 tttatttcttttctagcta 84811
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>emb|AL929343.7| Zebrafish DNA sequence from clone CH211-144G12, complete sequence
          Length = 150202

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 21    tttattgatttgattaaacaaca 43
             |||||||||||| ||||||||||
Sbjct: 47132 tttattgatttgtttaaacaaca 47154
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>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence
          Length = 207606

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaatagctttattgatt 30
              |||||||||||||||||||
Sbjct: 134792 aaaaatagctttattgatt 134810
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaaatagctttattgatt 30
              |||||||||||||||||||
Sbjct: 441379 aaaaatagctttattgatt 441397
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>gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p, complete sequence
          Length = 175773

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaaaatagctttattgatt 30
              |||||||||||||||||||
Sbjct: 175233 aaaaatagctttattgatt 175215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,001,394
Number of Sequences: 3902068
Number of extensions: 2001394
Number of successful extensions: 146849
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 146477
Number of HSP's gapped (non-prelim): 372
length of query: 198
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 176
effective length of database: 17,147,199,772
effective search space: 3017907159872
effective search space used: 3017907159872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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