ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 98 6e-21
2LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 79 3e-15
3LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 46 2e-05
4LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 42 5e-04
5LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 41 7e-04
6LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 40 0.002
7LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 40 0.002
8LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 39 0.004
9LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 39 0.004
10LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 38 0.006
11LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 38 0.006
12LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 38 0.006
13LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 37 0.010
14LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 37 0.010
15LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 37 0.013
16LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 37 0.017
17LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 35 0.065
18LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 35 0.065
19LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 35 0.065
20LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 35 0.065
21LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 34 0.11
22LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 33 0.19
23LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 33 0.19
24LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 32 0.42
25UREE_RHOS4 (Q3J156) Urease accessory protein ureE 30 1.6
26LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 29 2.7
27ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15) 28 4.6
28Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463 28 4.6
29LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment) 28 6.0

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 47/52 (90%), Positives = 47/52 (90%), Gaps = 5/52 (9%)
 Frame = -2

Query: 280  DEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEMGIPNSISI 140
            DEWNNDPDRKNRHGAGMVPYVLLRPS     DGDPTDEKMVMEMGIPNSISI
Sbjct: 885  DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -2

Query: 280  DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
            +EWN D  R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNSISI
Sbjct: 886  EEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932



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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 26/47 (55%), Positives = 30/47 (63%)
 Frame = -2

Query: 280 DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           D  NN+P+ KNR GAG+VPY LL+     P  E  V   GIPNSISI
Sbjct: 855 DMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNSISI 896



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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N DP R+NR GAG++PY L+ PS G       +   G+PNS++I
Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNSVTI 899



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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -2

Query: 277 EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIPNSISI 140
           + N +   KNR+G   +PY+LL P+  D T EK   +  MGIPNSISI
Sbjct: 830 DMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 23/45 (51%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIPNSISI 140
           N DP RKNR G    PY LL P+  D   D   +   GIPNSISI
Sbjct: 826 NKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 140
           N+DP+ KNR+G    PY+LL P+  D       +   GIPNSISI
Sbjct: 818 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862



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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/44 (52%), Positives = 26/44 (59%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N D  RKNR GAG++PY LL PS         V   G+PNSISI
Sbjct: 880 NADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918



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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 24/47 (51%), Positives = 28/47 (59%)
 Frame = -2

Query: 280 DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           DE N +   KNR GAG+V Y LL+     PT E  V  MG+P SISI
Sbjct: 855 DERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGVPYSISI 896



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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = -2

Query: 280  DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
            D  N D   KNR GAG++PY L++     P  +  V  MGIPNS SI
Sbjct: 883  DGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIPNSTSI 924



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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = -2

Query: 280  DEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPNSISI 140
            D  N D   KNR GAG++PY L++P SD   T       MGIPNS SI
Sbjct: 900  DGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MGIPNSTSI 941



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 140
           N D   KNR+G    PY+LL P+  D T     +   GIPNSISI
Sbjct: 822 NGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 23/47 (48%), Positives = 26/47 (55%)
 Frame = -2

Query: 280 DEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           DE N+D   KNR G   +PY LL PS      E  V   GIPNS+SI
Sbjct: 818 DERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNSVSI 859



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           NND   +NRHG   +PY LL PS      ++ +   GIPNSISI
Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPNSISI 861



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 21/44 (47%), Positives = 26/44 (59%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           NND   +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNSISI 866



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = -2

Query: 277 EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           E N D   +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 813 EKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPNSISI 853



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEMGIPNSISI 140
           N DP  KNR G    PY L+ P+  D     + +   GIPNSISI
Sbjct: 819 NKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N+DP  +NR G   +PY LL  S      E+ +   GIPNSISI
Sbjct: 826 NSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPNSISI 864



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = -2

Query: 277 EWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           E NND   +NR G   +PY LL PS      ++ +   GIPNSISI
Sbjct: 817 ERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPNSISI 857



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           NNDP   +R G   +PY LL PS      ++ +   GIPNSISI
Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNSISI 864



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 NNDPDRK-NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           NNDP  + NR G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 800 NNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N+    KNR G   VPY LL P     T E+ +   GIPNS+SI
Sbjct: 821 NSHKSWKNRSGPVNVPYTLLFP-----TSEEGLTGKGIPNSVSI 859



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           NND    NR G   +PY LL P+    T        GIPNSISI
Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNSISI 865



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N D   +NR+G   +PY +L P+     +++ +   GIPNSISI
Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSISI 862



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>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 263 PRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 135
           PR E P R   GA    + +G   HG   G G  HP  H+H+S
Sbjct: 128 PRTE-PFRPEGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 140
           N D    NR G    PY LL P     T E  +   GIPNS+SI
Sbjct: 823 NGDNILTNRSGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 861



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>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)|
          Length = 304

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 280 DEWNNDPDRKNRHGAGMVPYV 218
           D+W+  P+  N HG G+VP +
Sbjct: 24  DQWSQTPELINTHGVGVVPVI 44



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>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463|
          Length = 258

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 260 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 156
           R E  T  +HGAV A    G   H RE G G G P
Sbjct: 45  RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79



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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 271 NNDPDRKNRHGAGMVPYVLLRPS 203
           NND   +NR G   +PY LL PS
Sbjct: 709 NNDETLRNRTGPAKMPYTLLYPS 731


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,088,910
Number of Sequences: 219361
Number of extensions: 897225
Number of successful extensions: 2208
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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