ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468081.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
3dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
4dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
5dbj|AK065948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
6dbj|AK121954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
7gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosol... 46 0.084
8emb|AL022147.3|HS799N4 Human DNA sequence from clone RP4-799N4 o... 46 0.084
9dbj|AB210688.1| Ciona intestinalis mRNA for Smad4, complete cds,... 44 0.33
10dbj|AK114590.1| Ciona intestinalis cDNA, clone:cieg009m10, full ... 44 0.33
11ref|NM_188767.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
12gb|AY189895.1| Mus musculus CGG triplet repeat binding protein 1... 42 1.3
13gb|AY676928.1| Oryza sativa (indica cultivar-group) transcriptio... 42 1.3
14ref|XM_416999.1| PREDICTED: Gallus gallus similar to hypothetica... 42 1.3
15ref|XM_001000228.1| PREDICTED: Mus musculus hypothetical protein... 42 1.3
16gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosom... 42 1.3
17gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 42 1.3
18gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome... 42 1.3
19dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
20tpg|BK005004.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.3
21gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ... 42 1.3
22ref|XM_627165.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 1.3
23dbj|AK052195.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 42 1.3
24dbj|AK049631.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 42 1.3
25dbj|AK086053.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 1.3
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
29ref|XM_551977.1| Anopheles gambiae str. PEST ENSANGP00000028310 ... 42 1.3
30dbj|AK105509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
31gb|BC057053.1| Mus musculus CGG triplet repeat binding protein 1... 42 1.3
32emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chr... 42 1.3
33emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chrom... 42 1.3
34gb|AC169801.2| Rhesus Macaque BAC CH250-205G14 (Children's Hosp... 40 5.2
35ref|XM_510026.1| PREDICTED: Pan troglodytes similar to Butyrate ... 40 5.2
36gb|AY455863.1| Liparis gibbus type I antifreeze protein mRNA, co... 40 5.2
37gb|BT019468.1| Homo sapiens zinc finger protein 36, C3H type-lik... 40 5.2
38gb|BT019467.1| Synthetic construct Homo sapiens zinc finger prot... 40 5.2
39gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, co... 40 5.2
40gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, compl... 40 5.2
41ref|XM_806738.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.2
42ref|XM_861596.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
43ref|XM_532379.2| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
44ref|XM_861568.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
45ref|XM_861557.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
46ref|XM_861546.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
47ref|XM_847876.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
48ref|XM_861524.1| PREDICTED: Canis familiaris similar to musashi ... 40 5.2
49gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome... 40 5.2
50gb|BC016621.1| Mus musculus zinc finger protein 36, C3H type-lik... 40 5.2
51emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in ... 40 5.2
52emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chro... 40 5.2
53emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chro... 40 5.2
54emb|X99404.1|HSBERG36 H.sapiens mRNA for early response gene, Be... 40 5.2
55emb|X52590.1|RNCMG1 Rat cMG1 mRNA 40 5.2
56emb|AJ318471.1|BT3318471 Bacteriophage T3 complete genome, strai... 40 5.2
57emb|AJ251805.1|BPH251805 Bacteriophage phiYeO3-12 complete genome 40 5.2
58emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chr... 40 5.2
59gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 40 5.2
60emb|CR860870.1| Pongo pygmaeus mRNA; cDNA DKFZp469G0620 (from cl... 40 5.2
61gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, com... 40 5.2
62dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 5.2
63gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.2
64dbj|AK024202.1| Homo sapiens cDNA FLJ14140 fis, clone MAMMA10028... 40 5.2
65gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331... 40 5.2
66gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361... 40 5.2
67dbj|AK077855.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 40 5.2
68dbj|AK051035.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 5.2
69dbj|AK036950.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 5.2
70gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Ca... 40 5.2
71gb|AC105761.5| Homo sapiens BAC clone RP11-351F21 from 2, comple... 40 5.2
72ref|NM_017172.1| Rattus norvegicus zinc finger protein 36, C3H t... 40 5.2
73gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, com... 40 5.2
74emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 ... 40 5.2
75gb|AY891543.1| Synthetic construct Homo sapiens clone FLH018030.... 40 5.2
76gb|AY888932.1| Synthetic construct Homo sapiens clone FLH018034.... 40 5.2
77gb|AY888345.1| Synthetic construct Homo sapiens clone FLH008371.... 40 5.2
78gb|AY890944.1| Synthetic construct Homo sapiens clone FLH008367.... 40 5.2
79dbj|AK108219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
80gb|BC018340.1| Homo sapiens zinc finger protein 36, C3H type-lik... 40 5.2
81emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 ... 40 5.2
82ref|NM_004926.2| Homo sapiens zinc finger protein 36, C3H type-l... 40 5.2
83emb|AL132986.4|CNS01DTU Human chromosome 14 DNA sequence BAC R-7... 40 5.2
84emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-3... 40 5.2
85emb|AL133313.2|CNS01DUQ Human chromosome 14 DNA sequence Partial... 40 5.2
86emb|X79067.1|HSERF13 H.sapiens ERF-1 mRNA 3' end 40 5.2
87ref|NM_007564.2| Mus musculus zinc finger protein 36, C3H type-l... 40 5.2
88gb|M58566.1|MUSTIS11B Mouse TIS11 primary response gene, complet... 40 5.2
89emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on ch... 40 5.2
90dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, comp... 40 5.2 
>ref|XM_468081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3585

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
            ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 3281 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 3222

                                                                        
Query: 322  cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
            ||||   ||| |||  |||||| | ||| |||||  ||||||| || ||||||||||| |
Sbjct: 3221 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagtcacaccaa 3162

                   
Query: 382  tccagat 388
            |||||||
Sbjct: 3161 tccagat 3155
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                            
Query: 262      gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
                ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 32963338 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 32963279

                                                                            
Query: 322      cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
                ||||   ||| |||  |||||| | ||| |||||  ||||||| || ||||||||||| |
Sbjct: 32963278 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagtcacaccaa 32963219

                       
Query: 382      tccagat 388
                |||||||
Sbjct: 32963218 tccagat 32963212
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1293_A01
          Length = 139121

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
            ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 9278 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 9219

                                                                        
Query: 322  cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
            ||||   ||| |||  |||||| | ||| |||||  ||||||| || ||||||||||| |
Sbjct: 9218 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagtcacaccaa 9159

                   
Query: 382  tccagat 388
            |||||||
Sbjct: 9158 tccagat 9152
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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1534_E09
          Length = 126209

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                          
Query: 262    gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
              ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 118079 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 118020

                                                                          
Query: 322    cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
              ||||   ||| |||  |||||| | ||| |||||  ||||||| || ||||||||||| |
Sbjct: 118019 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagtcacaccaa 117960

                     
Query: 382    tccagat 388
              |||||||
Sbjct: 117959 tccagat 117953
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>dbj|AK065948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046B21, full
            insert sequence
          Length = 3585

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
            ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 3281 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 3222

                                                                        
Query: 322  cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
            ||||   ||| |||  |||||| | ||| |||||  ||||||| || ||||||||||| |
Sbjct: 3221 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagtcacaccaa 3162

                   
Query: 382  tccagat 388
            |||||||
Sbjct: 3161 tccagat 3155
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>dbj|AK121954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M07, full
            insert sequence
          Length = 1439

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcagatcaatgacgccgtggcaccgcgagcatagcgtaggatggtcaacgaacaacccaa 321
            ||||||||||||| ||||||||||| |  || || ||||||||||||| |||  | ||||
Sbjct: 1135 gcagatcaatgacaccgtggcaccgggcacaaagagtaggatggtcaaggaaagatccaa 1076

                                                                        
Query: 322  cgtccttggtgtaaacccagcagcgctcgcatttcacgccatccgcacgagtcacaccga 381
            ||||   ||| |||  |||||| | ||| |||||  ||||||| || |||| |||||| |
Sbjct: 1075 cgtctcgggtataattccagcacctctcacatttttcgccatcggcgcgagacacaccaa 1016

                   
Query: 382  tccagat 388
            |||||||
Sbjct: 1015 tccagat 1009
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>gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosolic, calcium-dependent)
             (PLA2G4A) gene, complete cds
          Length = 163504

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 94    taaaaatcttctcttctattttg 116
             |||||||||||||||||||||||
Sbjct: 36028 taaaaatcttctcttctattttg 36050
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>emb|AL022147.3|HS799N4 Human DNA sequence from clone RP4-799N4 on chromosome 1q31 Contains the
             5' end of the PLA2G4A gene for phospholipase A2 group IVA
             (cytosolic, calcium dependent), complete sequence
          Length = 114638

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 94    taaaaatcttctcttctattttg 116
             |||||||||||||||||||||||
Sbjct: 48600 taaaaatcttctcttctattttg 48622
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>dbj|AB210688.1| Ciona intestinalis mRNA for Smad4, complete cds, clone: cieg094d17
          Length = 3171

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 101  cttctcttctattttgttcagt 122
            ||||||||||||||||||||||
Sbjct: 1991 cttctcttctattttgttcagt 2012
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>dbj|AK114590.1| Ciona intestinalis cDNA, clone:cieg009m10, full insert sequence
          Length = 1571

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 101 cttctcttctattttgttcagt 122
           ||||||||||||||||||||||
Sbjct: 405 cttctcttctattttgttcagt 426
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>ref|NM_188767.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1908

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 223 cgacagcggcggtggcagcggcagg 247
           |||||||||||||||| ||||||||
Sbjct: 261 cgacagcggcggtggcggcggcagg 285
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>gb|AY189895.1| Mus musculus CGG triplet repeat binding protein 1 gene, complete
           cds
          Length = 14530

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 720 cggcggtggcagcggcaggag 740
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>gb|AY676928.1| Oryza sativa (indica cultivar-group) transcription factor WRKY10
           (WRKY10) mRNA, complete cds
          Length = 1743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 223 cgacagcggcggtggcagcggcagg 247
           |||||||||||||||| ||||||||
Sbjct: 12  cgacagcggcggtggcggcggcagg 36
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>ref|XM_416999.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC418805),
            mRNA
          Length = 3306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  gcgacagcggcggtggcagcg 242
            |||||||||||||||||||||
Sbjct: 2927 gcgacagcggcggtggcagcg 2947
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>ref|XM_001000228.1| PREDICTED: Mus musculus hypothetical protein LOC668240 (LOC668240),
           mRNA
          Length = 741

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 583 cggcggtggcagcggcaggag 563
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>gb|AC132430.3| Mus musculus BAC clone RP23-208D22 from chromosome 9, complete sequence
          Length = 192991

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ttctcttctattttgttcagt 122
             |||||||||||||||||||||
Sbjct: 13422 ttctcttctattttgttcagt 13402
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   cgacagcggcggtggcagcggcagg 247
             |||||||||||||||| ||||||||
Sbjct: 47496 cgacagcggcggtggcggcggcagg 47520
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>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence
          Length = 203706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    ttctcttctattttgttcagt 122
              |||||||||||||||||||||
Sbjct: 122681 ttctcttctattttgttcagt 122661
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>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   cgacagcggcggtggcagcggcagg 247
             |||||||||||||||| ||||||||
Sbjct: 80034 cgacagcggcggtggcggcggcagg 80058
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>tpg|BK005004.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
           transcription factor 1 (WRKY1) gene, complete cds
          Length = 2434

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 223 cgacagcggcggtggcagcggcagg 247
           |||||||||||||||| ||||||||
Sbjct: 135 cgacagcggcggtggcggcggcagg 159
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>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence
          Length = 244730

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   cggcggtggcagcggcaggag 249
             |||||||||||||||||||||
Sbjct: 64135 cggcggtggcagcggcaggag 64155
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>ref|XM_627165.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2650),
            partial mRNA
          Length = 10467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 4    cagaaactccaattactacaa 24
            |||||||||||||||||||||
Sbjct: 7859 cagaaactccaattactacaa 7879
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>dbj|AK052195.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330006C05 product:P20-CGGBP homolog
           [Homo sapiens], full insert sequence
          Length = 1830

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 37  cggcggtggcagcggcaggag 57
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>dbj|AK049631.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:C530009M20 product:P20-CGGBP
           homolog [Homo sapiens], full insert sequence
          Length = 4287

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 46  cggcggtggcagcggcaggag 66
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>dbj|AK086053.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930001C09 product:CGG TRIPLET REPEAT
           BINDING PROTEIN 1 homolog [Homo sapiens], full insert
           sequence
          Length = 2351

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 48  cggcggtggcagcggcaggag 68
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 223     cgacagcggcggtggcagcggcagg 247
               |||||||||||||||| ||||||||
Sbjct: 8083383 cgacagcggcggtggcggcggcagg 8083407
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0034C11
          Length = 139399

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 223  cgacagcggcggtggcagcggcagg 247
            |||||||||||||||| ||||||||
Sbjct: 1101 cgacagcggcggtggcggcggcagg 1125
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 226     cagcggcggtggcagcggcag 246
               |||||||||||||||||||||
Sbjct: 2026167 cagcggcggtggcagcggcag 2026147
to top
>ref|XM_551977.1| Anopheles gambiae str. PEST ENSANGP00000028310
           (ENSANGG00000022873), partial mRNA
          Length = 3246

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 226 cagcggcggtggcagcggcag 246
           |||||||||||||||||||||
Sbjct: 354 cagcggcggtggcagcggcag 374
to top
>dbj|AK105509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E04, full
           insert sequence
          Length = 1606

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 223 cgacagcggcggtggcagcggcagg 247
           |||||||||||||||| ||||||||
Sbjct: 201 cgacagcggcggtggcggcggcagg 225
to top
>gb|BC057053.1| Mus musculus CGG triplet repeat binding protein 1, mRNA (cDNA clone
           MGC:67337 IMAGE:6827183), complete cds
          Length = 4285

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 229 cggcggtggcagcggcaggag 249
           |||||||||||||||||||||
Sbjct: 26  cggcggtggcagcggcaggag 46
to top
>emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chromosome 16, complete
             sequence
          Length = 224292

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   cggcggtggcagcggcaggag 249
             |||||||||||||||||||||
Sbjct: 16895 cggcggtggcagcggcaggag 16875
to top
>emb|AL807384.5| Mouse DNA sequence from clone RP23-18F9 on chromosome 2, complete
              sequence
          Length = 218815

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 228    gcggcggtggcagcggcagga 248
              |||||||||||||||||||||
Sbjct: 164144 gcggcggtggcagcggcagga 164124
to top
>gb|AC169801.2| Rhesus Macaque  BAC CH250-205G14 (Children's Hospital Oakland
            Research Institute Rhesus macaque Adult Male BAC Library)
            complete sequence
          Length = 168949

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 226  cagcggcggtggcagcggcaggag 249
            ||||||||| ||||||||||||||
Sbjct: 5224 cagcggcggcggcagcggcaggag 5247
to top
>ref|XM_510026.1| PREDICTED: Pan troglodytes similar to Butyrate response factor 1
           (TIS11B protein) (EGF-response factor 1) (ERF-1)
           (LOC452992), mRNA
          Length = 2201

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 916 cagcggcggtggcagcggca 897
to top
>gb|AY455863.1| Liparis gibbus type I antifreeze protein mRNA, complete cds
          Length = 587

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 221 agcgacagcggcggtggcagcggc 244
           |||| |||||||||||||||||||
Sbjct: 198 agcggcagcggcggtggcagcggc 175
to top
>gb|BT019468.1| Homo sapiens zinc finger protein 36, C3H type-like 1 mRNA, complete
           cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>gb|BT019467.1| Synthetic construct Homo sapiens zinc finger protein 36, C3H
           type-like 1 mRNA, partial cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence
          Length = 213381

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cagcggcggtggcagcggca 245
             ||||||||||||||||||||
Sbjct: 87859 cagcggcggtggcagcggca 87840
to top
>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence
          Length = 229752

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    cttctcttctattttgttcagtat 124
              |||||||| |||||||||||||||
Sbjct: 139363 cttctcttttattttgttcagtat 139340
to top
>ref|XM_806738.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509537.50) partial mRNA
          Length = 7554

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 230  ggcggtggcagcggcaggag 249
            ||||||||||||||||||||
Sbjct: 4098 ggcggtggcagcggcaggag 4079
to top
>ref|XM_861596.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 7 (LOC475148), mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 888 cagcggcggtggcagcggca 907
to top
>ref|XM_532379.2| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 1 (LOC475148), mRNA
          Length = 1388

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 749 cagcggcggtggcagcggca 768
to top
>ref|XM_861568.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 6 (LOC475148), mRNA
          Length = 1503

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 888 cagcggcggtggcagcggca 907
to top
>ref|XM_861557.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 5 (LOC475148), mRNA
          Length = 1764

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 888 cagcggcggtggcagcggca 907
to top
>ref|XM_861546.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 4 (LOC475148), mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 948 cagcggcggtggcagcggca 967
to top
>ref|XM_847876.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 2 (LOC475148), mRNA
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 836 cagcggcggtggcagcggca 855
to top
>ref|XM_861524.1| PREDICTED: Canis familiaris similar to musashi 2 isoform a,
           transcript variant 3 (LOC475148), mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 888 cagcggcggtggcagcggca 907
to top
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence
          Length = 193830

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   gcggcggtggcagcggcagg 247
             ||||||||||||||||||||
Sbjct: 59277 gcggcggtggcagcggcagg 59296
to top
>gb|BC016621.1| Mus musculus zinc finger protein 36, C3H type-like 1, mRNA (cDNA
           clone MGC:11624 IMAGE:3157001), complete cds
          Length = 1967

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 769 cagcggcggtggcagcggca 750
to top
>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11,
             complete sequence
          Length = 175925

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    tgtatatagttgtacatgcaaagaaaat 64
             ||||||||||||| |||||| |||||||
Sbjct: 81292 tgtatatagttgtgcatgcacagaaaat 81265
to top
>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a
              likely ortholog of mouse hepatoma-derived growth factor
              related protein 3 pseudogene (HDGFRP3), a novel protein
              similar to PAGE-5 protein (LOC203569), a novel protein
              similar to PAGE-5 protein (LOC139795), gene FLJ20434, a
              cytochrome c oxidase I (MTCO1) pseudogene, a G antigen,
              family D pseudogene and a CpG island, complete sequence
          Length = 130005

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aaatcttctcttctattttg 116
              ||||||||||||||||||||
Sbjct: 109476 aaatcttctcttctattttg 109457
to top
>emb|AL356754.18| Human DNA sequence from clone RP11-11C5 on chromosome 13 Contains a 60S
             ribosomal protein L21 (RPL21) pseudogene and the 3' end of
             a novel gene, complete sequence
          Length = 169888

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ttcaaaaccaggtttcagat 88
             ||||||||||||||||||||
Sbjct: 14985 ttcaaaaccaggtttcagat 15004
to top
>emb|X99404.1|HSBERG36 H.sapiens mRNA for early response gene, Berg36
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>emb|X52590.1|RNCMG1 Rat cMG1 mRNA
          Length = 2741

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 759 cagcggcggtggcagcggca 740
to top
>emb|AJ318471.1|BT3318471 Bacteriophage T3 complete genome, strain Luria
          Length = 38208

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   cacctacaatcttcacaatg 187
             ||||||||||||||||||||
Sbjct: 23865 cacctacaatcttcacaatg 23846
to top
>emb|AJ251805.1|BPH251805 Bacteriophage phiYeO3-12 complete genome
          Length = 39600

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   cacctacaatcttcacaatg 187
             ||||||||||||||||||||
Sbjct: 24631 cacctacaatcttcacaatg 24612
to top
>emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chromosome 11 Contains a
             novel gene (LOC327917), the 5' end of the Adamts2 gene for
             a disintegrin-like and metalloprotease (reprolysin type)
             with thrombospondin type 1 motif 2, two novel genes
             (4930579K21) and a CpG island, complete sequence
          Length = 188520

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tccttggtgtaaacccagca 343
             ||||||||||||||||||||
Sbjct: 93149 tccttggtgtaaacccagca 93130
to top
>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     aaatcttctcttctattttg 116
              ||||||||||||||||||||
Sbjct: 171233 aaatcttctcttctattttg 171252
to top
>emb|CR860870.1| Pongo pygmaeus mRNA; cDNA DKFZp469G0620 (from clone DKFZp469G0620)
          Length = 3033

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 791 cagcggcggtggcagcggca 772
to top
>gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, complete sequence
          Length = 194188

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    atcttctcttctattttgtt 118
             ||||||||||||||||||||
Sbjct: 72097 atcttctcttctattttgtt 72078
to top
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 332     gtaaacccagcagcgctcgcattt 355
               ||||| ||||||||||||||||||
Sbjct: 3280756 gtaaatccagcagcgctcgcattt 3280779
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ggcggtggcagcggcaggag 249
              ||||||||||||||||||||
Sbjct: 211723 ggcggtggcagcggcaggag 211704
to top
>dbj|AK024202.1| Homo sapiens cDNA FLJ14140 fis, clone MAMMA1002858, highly similar to
            Rat cMG1 mRNA
          Length = 3027

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  cagcggcggtggcagcggca 245
            ||||||||||||||||||||
Sbjct: 2446 cagcggcggtggcagcggca 2427
to top
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence
          Length = 198695

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    gcggcggtggcagcggcagg 247
              ||||||||||||||||||||
Sbjct: 135501 gcggcggtggcagcggcagg 135482
to top
>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence
          Length = 211611

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    gcggcggtggcagcggcagg 247
              ||||||||||||||||||||
Sbjct: 203864 gcggcggtggcagcggcagg 203883
to top
>dbj|AK077855.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length
           enriched library, clone:5930421O16 product:zinc finger
           protein 36, C3H type-like 1, full insert sequence
          Length = 2049

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 781 cagcggcggtggcagcggca 762
to top
>dbj|AK051035.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030058A11 product:zinc finger
           protein 36, C3H type-like 1, full insert sequence
          Length = 2986

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 785 cagcggcggtggcagcggca 766
to top
>dbj|AK036950.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930029G08 product:zinc finger protein
           36, C3H type-like 1, full insert sequence
          Length = 2516

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 785 cagcggcggtggcagcggca 766
to top
>gb|AC069234.35| Homo sapiens 12 BAC RP11-173P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183354

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     ccctaaaaatcttctcttct 110
              ||||||||||||||||||||
Sbjct: 153076 ccctaaaaatcttctcttct 153095
to top
>gb|AC105761.5| Homo sapiens BAC clone RP11-351F21 from 2, complete sequence
          Length = 84834

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aaaatcttctcttctatttt 115
             ||||||||||||||||||||
Sbjct: 48103 aaaatcttctcttctatttt 48122
to top
>ref|NM_017172.1| Rattus norvegicus zinc finger protein 36, C3H type-like 1
           (Zfp36l1), mRNA
          Length = 2741

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 759 cagcggcggtggcagcggca 740
to top
>gb|AC135626.4| Homo sapiens chromosome 15, clone RP11-354B3, complete sequence
          Length = 180684

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aaatcttctcttctattttg 116
             ||||||||||||||||||||
Sbjct: 27120 aaatcttctcttctattttg 27139
to top
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8,
              complete sequence
          Length = 234864

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    ctttctttgtggaacaaaaa 155
              ||||||||||||||||||||
Sbjct: 201903 ctttctttgtggaacaaaaa 201884
to top
>gb|AY891543.1| Synthetic construct Homo sapiens clone FLH018030.01L zinc finger
           protein 36 C3H type-like 1 (ZFP36L1) mRNA, partial cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>gb|AY888932.1| Synthetic construct Homo sapiens clone FLH018034.01X zinc finger
           protein 36 C3H type-like 1 (ZFP36L1) mRNA, complete cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>gb|AY888345.1| Synthetic construct Homo sapiens clone FLH008371.01X zinc finger
           protein 36 C3H type-like 1 (ZFP36L1) mRNA, complete cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>gb|AY890944.1| Synthetic construct Homo sapiens clone FLH008367.01L zinc finger
           protein 36 C3H type-like 1 (ZFP36L1) mRNA, partial cds
          Length = 1017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 646 cagcggcggtggcagcggca 627
to top
>dbj|AK108219.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-E08, full
           insert sequence
          Length = 942

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 tcacgccatccgcacgagtc 374
           ||||||||||||||||||||
Sbjct: 194 tcacgccatccgcacgagtc 175
to top
>gb|BC018340.1| Homo sapiens zinc finger protein 36, C3H type-like 1, mRNA (cDNA
           clone MGC:9372 IMAGE:3860353), complete cds
          Length = 2048

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 768 cagcggcggtggcagcggca 749
to top
>emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 in linkage group 2,
             complete sequence
          Length = 163971

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   tttgcggttgcagatcaatg 272
             ||||||||||||||||||||
Sbjct: 23604 tttgcggttgcagatcaatg 23585
to top
>ref|NM_004926.2| Homo sapiens zinc finger protein 36, C3H type-like 1 (ZFP36L1),
           mRNA
          Length = 3022

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 776 cagcggcggtggcagcggca 757
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>emb|AL132986.4|CNS01DTU Human chromosome 14 DNA sequence BAC R-723P16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 182996

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    cagcggcggtggcagcggca 245
              ||||||||||||||||||||
Sbjct: 103233 cagcggcggtggcagcggca 103214
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>emb|AL117355.5|CNS01DRL Human chromosome 14 DNA sequence BAC R-354E14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174933

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    cctaaaaatcttctcttctatttt 115
             ||||||||||||||| ||||||||
Sbjct: 61052 cctaaaaatcttctcctctatttt 61075
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>emb|AL133313.2|CNS01DUQ Human chromosome 14 DNA sequence Partial sequence from BAC R-1082A1 of
             library RPCI-11 from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 184906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cagcggcggtggcagcggca 245
             ||||||||||||||||||||
Sbjct: 82608 cagcggcggtggcagcggca 82589
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>emb|X79067.1|HSERF13 H.sapiens ERF-1 mRNA 3' end
          Length = 3922

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  cagcggcggtggcagcggca 245
            ||||||||||||||||||||
Sbjct: 1362 cagcggcggtggcagcggca 1343
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>ref|NM_007564.2| Mus musculus zinc finger protein 36, C3H type-like 1 (Zfp36l1),
           mRNA
          Length = 2986

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 785 cagcggcggtggcagcggca 766
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>gb|M58566.1|MUSTIS11B Mouse TIS11 primary response gene, complete cds
          Length = 2659

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cagcggcggtggcagcggca 245
           ||||||||||||||||||||
Sbjct: 713 cagcggcggtggcagcggca 694
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>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete
              sequence
          Length = 227395

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    cagcggcggtggcagcggca 245
              ||||||||||||||||||||
Sbjct: 196700 cagcggcggtggcagcggca 196681
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>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence
          Length = 38211

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 95   aaaaatcttctcttctattttgtt 118
            ||||||||||||| ||||||||||
Sbjct: 3585 aaaaatcttctctactattttgtt 3608


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,443,812
Number of Sequences: 3902068
Number of extensions: 3443812
Number of successful extensions: 70528
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70291
Number of HSP's gapped (non-prelim): 232
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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