ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl46b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 188 2e-45
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 188 2e-45
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 90 1e-15
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-15
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-15
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 90 1e-15
8gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome... 44 0.071
9emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ... 42 0.28
10emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 i... 42 0.28
11gb|AC009901.6|AC009901 Homo sapiens chromosome 8, clone RP11-98H... 42 0.28
12emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15,... 42 0.28
13gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, co... 40 1.1
14emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 1.1
15emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 1.1
16gb|AC157511.2| Mus musculus BAC clone RP24-456J10 from chromosom... 40 1.1
17gb|AC018630.40| Homo sapiens 12 BAC RP11-673D15 (Roswell Park Ca... 40 1.1
18emb|BX001069.5| Zebrafish DNA sequence from clone DKEY-280J14 in... 40 1.1
19emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 1.1
20emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 1.1
21emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 40 1.1
22emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 1.1
23emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 40 1.1
24gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosom... 40 1.1
25gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosom... 38 4.4
26gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, co... 38 4.4
27gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, com... 38 4.4
28gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosom... 38 4.4
29gb|AY267749.1| Mytilus edulis histone H3 (H3) gene, complete cds 38 4.4
30emb|CR391904.14| Zebrafish DNA sequence from clone DKEY-165J6 in... 38 4.4
31emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in... 38 4.4
32gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome ... 38 4.4
33gb|AC098722.3| Mus musculus BAC clone RP23-3B20 from 14, complet... 38 4.4
34gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, com... 38 4.4
35gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete se... 38 4.4
36gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, com... 38 4.4
37emb|BX664700.3| Human DNA sequence from clone WI2-84993E12 on ch... 38 4.4
38emb|AL442644.7| Human DNA sequence from clone RP11-342F21 on chr... 38 4.4
39emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 38 4.4
40gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, comple... 38 4.4
41emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in ... 38 4.4
42emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 ... 38 4.4
43dbj|AB079784.1| Ciona savignyi mitochondrial DNA, complete genome 38 4.4
44gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence 38 4.4
45gb|AC090200.4| Homo sapiens chromosome 8, clone RP11-628E19, com... 38 4.4
46gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, com... 38 4.4
47gb|AC024367.7| Homo sapiens chromosome 8, clone RP11-75G10, comp... 38 4.4
48emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in... 38 4.4
49emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in... 38 4.4
50gb|AC026704.5| Homo sapiens chromosome 5 clone CTD-2036P8, compl... 38 4.4
51emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in ... 38 4.4
52gb|AC156400.9| Mus musculus 6 BAC RP24-299B14 (Roswell Park Canc... 38 4.4
53emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in ... 38 4.4
54emb|BX279524.5| Zebrafish DNA sequence from clone DKEY-35H11 in ... 38 4.4
55gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosom... 38 4.4
56gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cance... 38 4.4
57gb|AC020728.4|AC020728 Homo sapiens BAC clone RP11-506H20 from 5... 38 4.4
58emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, c... 38 4.4
59emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in l... 38 4.4
60emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, co... 38 4.4
61emb|BX005204.7| Zebrafish DNA sequence from clone CH211-151G17, ... 38 4.4
62emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in... 38 4.4
63emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in ... 38 4.4
64emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in... 38 4.4
65emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 38 4.4
66gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, com... 38 4.4
67emb|AL929115.9| Zebrafish DNA sequence from clone CH211-146M13 i... 38 4.4
68dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 4.4
69gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay... 38 4.4
70emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in ... 38 4.4
71emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 ... 38 4.4
72emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, co... 38 4.4
73dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 4.4 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  188 bits (95), Expect = 2e-45
 Identities = 98/99 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccacagta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2835 cgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccacagta 2776

                                                   
Query: 61   cattgttacaaattgtgtaaaaactgaaaagaaataata 99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2775 cattgttacaaattgtgtaagaactgaaaagaaataata 2737
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  188 bits (95), Expect = 2e-45
 Identities = 98/99 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    cgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccacagta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 cgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccacagta 2780

                                                   
Query: 61   cattgttacaaattgtgtaaaaactgaaaagaaataata 99
            |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2779 cattgttacaaattgtgtaagaactgaaaagaaataata 2741
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                         
Query: 16    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 74
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                  
Query: 75    gtgta 79
             |||||
Sbjct: 42165 gtgta 42169
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                            
Query: 16       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 74
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                     
Query: 75       gtgta 79
                |||||
Sbjct: 24921580 gtgta 24921584
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 16   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 74
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                 
Query: 75   gtgta 79
            |||||
Sbjct: 2735 gtgta 2731
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 16   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 74
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                 
Query: 75   gtgta 79
            |||||
Sbjct: 1641 gtgta 1637
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 89.7 bits (45), Expect = 1e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                         
Query: 16    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 74
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                  
Query: 75    gtgta 79
             |||||
Sbjct: 49694 gtgta 49698
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>gb|AC140360.4| Mus musculus BAC clone RP24-241G4 from chromosome 12, complete sequence
          Length = 181901

 Score = 44.1 bits (22), Expect = 0.071
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 74     tgtgtaaaaactgaaaagaaataata 99
              ||||| ||||||||||||||||||||
Sbjct: 113559 tgtgttaaaactgaaaagaaataata 113584
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>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 7      ctacaatgctgacacgatatattgt 31
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
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>emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 in linkage group 23,
              complete sequence
          Length = 128483

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     aaaaactgaaaagaaataata 99
              |||||||||||||||||||||
Sbjct: 103737 aaaaactgaaaagaaataata 103757
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>gb|AC009901.6|AC009901 Homo sapiens chromosome 8, clone RP11-98H4, complete sequence
          Length = 151966

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    aaattgtgtaaaaactgaaaa 90
             |||||||||||||||||||||
Sbjct: 86190 aaattgtgtaaaaactgaaaa 86210
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>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence
          Length = 150641

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     aaaaactgaaaagaaataata 99
              |||||||||||||||||||||
Sbjct: 106233 aaaaactgaaaagaaataata 106253
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>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence
          Length = 138043

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    gtaaaaactgaaaagaaata 96
             ||||||||||||||||||||
Sbjct: 79632 gtaaaaactgaaaagaaata 79651
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgctgacacgatatattgt 31
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     atgctgacacgatatattgt 31
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776
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>gb|AC157511.2| Mus musculus BAC clone RP24-456J10 from chromosome 9, complete sequence
          Length = 167921

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tgtaaaaactgaaaagaaat 95
             ||||||||||||||||||||
Sbjct: 24836 tgtaaaaactgaaaagaaat 24855
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>gb|AC018630.40| Homo sapiens 12 BAC RP11-673D15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167868

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    taaaaactgaaaagaaataa 97
             ||||||||||||||||||||
Sbjct: 54203 taaaaactgaaaagaaataa 54222
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>emb|BX001069.5| Zebrafish DNA sequence from clone DKEY-280J14 in linkage group 9,
             complete sequence
          Length = 146096

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    attgtgtaaaaactgaaaag 91
             ||||||||||||||||||||
Sbjct: 25937 attgtgtaaaaactgaaaag 25918
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>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgctgacacgatatattgt 31
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgctgacacgatatattgt 31
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgctgacacgatatattgt 31
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    atgctgacacgatatattgt 31
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     atgctgacacgatatattgt 31
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096
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>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete sequence
          Length = 177627

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     gtaaaaactgaaaagaaata 96
              ||||||||||||||||||||
Sbjct: 133309 gtaaaaactgaaaagaaata 133328
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>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete
             sequence
          Length = 164905

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    aatactccaaaaccacagt 59
             |||||||||||||||||||
Sbjct: 66373 aatactccaaaaccacagt 66391
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>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence
          Length = 211071

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 51   aaccacagtacattgttacaaat 73
            ||||| |||||||||||||||||
Sbjct: 9388 aaccagagtacattgttacaaat 9410
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>gb|AC136730.9| Mus musculus chromosome 19, clone RP23-76E22, complete sequence
          Length = 146616

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    aaaaactgaaaagaaataa 97
             |||||||||||||||||||
Sbjct: 51187 aaaaactgaaaagaaataa 51205
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>gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosome 5, complete sequence
          Length = 199822

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     aaaaactgaaaagaaataa 97
              |||||||||||||||||||
Sbjct: 116666 aaaaactgaaaagaaataa 116684
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>gb|AY267749.1| Mytilus edulis histone H3 (H3) gene, complete cds
          Length = 907

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 35  cgacagaatactccaaaac 53
           |||||||||||||||||||
Sbjct: 239 cgacagaatactccaaaac 221
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>emb|CR391904.14| Zebrafish DNA sequence from clone DKEY-165J6 in linkage group 3,
             complete sequence
          Length = 147391

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 52385 acaatgctgaaacgatatattgt 52363
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>emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in linkage group 24,
              complete sequence
          Length = 153729

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     aaactgaaaagaaataata 99
              |||||||||||||||||||
Sbjct: 129966 aaactgaaaagaaataata 129984
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>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence
          Length = 256476

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    tgtaaaaactgaaaagaaa 94
             |||||||||||||||||||
Sbjct: 78594 tgtaaaaactgaaaagaaa 78612
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>gb|AC098722.3| Mus musculus BAC clone RP23-3B20 from 14, complete sequence
          Length = 197946

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     tgtaaaaactgaaaagaaa 94
              |||||||||||||||||||
Sbjct: 197582 tgtaaaaactgaaaagaaa 197600
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>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence
          Length = 164681

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 51    aaccacagtacattgttacaaat 73
             ||||| |||||||||||||||||
Sbjct: 12053 aaccagagtacattgttacaaat 12031
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>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence
          Length = 102937

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    aaaactgaaaagaaataat 98
             |||||||||||||||||||
Sbjct: 13395 aaaactgaaaagaaataat 13377
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>gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, complete sequence
          Length = 188740

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     aaaaactgaaaagaaataa 97
              |||||||||||||||||||
Sbjct: 115683 aaaaactgaaaagaaataa 115701
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>emb|BX664700.3| Human DNA sequence from clone WI2-84993E12 on chromosome 10 Contains
             the 5' end of the PLEKHA1 gene for pleckstrin homology
             domain containing, family A (phosphoinositide binding
             specific) member 1 and a CpG island, complete sequence
          Length = 39214

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aaaaactgaaaagaaataa 97
             |||||||||||||||||||
Sbjct: 13925 aaaaactgaaaagaaataa 13907
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>emb|AL442644.7| Human DNA sequence from clone RP11-342F21 on chromosome 9 Contains a
             novel pseudogene, and the 5' end of a novel gene, complete
             sequence
          Length = 160264

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    aaaactgaaaagaaataat 98
             |||||||||||||||||||
Sbjct: 25497 aaaactgaaaagaaataat 25515
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>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
             vomeronasal receptor (V1R) pseudogene, a cubilin
             (intrinsic factor-cobalamin receptor) (CUBN) pseudogene,
             gene KIAA0187, two novel genes, the gene for a novel
             protein similar to Ras suppressor protein 1 (RSU1) and
             four CpG islands, complete sequence
          Length = 197864

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    tgttacaaattgtgtaaaa 82
             |||||||||||||||||||
Sbjct: 22021 tgttacaaattgtgtaaaa 22003
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>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence
          Length = 195404

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aaaaactgaaaagaaataa 97
             |||||||||||||||||||
Sbjct: 50786 aaaaactgaaaagaaataa 50768
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>emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in linkage group 13,
             complete sequence
          Length = 192818

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 18492 acaatgctgaaacgatatattgt 18514
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>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3,
             complete sequence
          Length = 187734

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 49113 acaatgctgaaacgatatattgt 49135
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>dbj|AB079784.1| Ciona savignyi mitochondrial DNA, complete genome
          Length = 14737

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 79   aaaaactgaaaagaaataa 97
            |||||||||||||||||||
Sbjct: 5335 aaaaactgaaaagaaataa 5317
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>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence
          Length = 155629

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 64     tgttacaaattgtgtaaaa 82
              |||||||||||||||||||
Sbjct: 142802 tgttacaaattgtgtaaaa 142820
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>gb|AC090200.4| Homo sapiens chromosome 8, clone RP11-628E19, complete sequence
          Length = 149955

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    gtaaaaactgaaaagaaat 95
             |||||||||||||||||||
Sbjct: 86561 gtaaaaactgaaaagaaat 86579
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>gb|AC022598.10| Homo sapiens chromosome 8, clone RP11-119K7, complete sequence
          Length = 155323

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     taaaaactgaaaagaaata 96
              |||||||||||||||||||
Sbjct: 150323 taaaaactgaaaagaaata 150305
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>gb|AC024367.7| Homo sapiens chromosome 8, clone RP11-75G10, complete sequence
          Length = 170022

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    taaaaactgaaaagaaata 96
             |||||||||||||||||||
Sbjct: 39237 taaaaactgaaaagaaata 39219
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>emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in linkage group 8,
             complete sequence
          Length = 119483

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 10    caatgctgacacgatatattgta 32
             ||||||||| |||||||||||||
Sbjct: 75771 caatgctgaaacgatatattgta 75793
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>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23,
              complete sequence
          Length = 261934

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 10     caatgctgacacgatatattgta 32
              ||||||||| |||||||||||||
Sbjct: 184614 caatgctgaaacgatatattgta 184636
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>gb|AC026704.5| Homo sapiens chromosome 5 clone CTD-2036P8, complete sequence
          Length = 89677

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    taaaaactgaaaagaaata 96
             |||||||||||||||||||
Sbjct: 60176 taaaaactgaaaagaaata 60158
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>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14,
              complete sequence
          Length = 168546

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 10     caatgctgacacgatatattgta 32
              ||||||||| |||||||||||||
Sbjct: 162697 caatgctgaaacgatatattgta 162675
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>gb|AC156400.9| Mus musculus 6 BAC RP24-299B14 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 158629

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    aaaaactgaaaagaaataa 97
             |||||||||||||||||||
Sbjct: 64283 aaaaactgaaaagaaataa 64301
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>emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in linkage group 17,
              complete sequence
          Length = 161395

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 72     attgtgtaaaaactgaaaagaaa 94
              |||||||||| ||||||||||||
Sbjct: 111480 attgtgtaaatactgaaaagaaa 111458
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>emb|BX279524.5| Zebrafish DNA sequence from clone DKEY-35H11 in linkage group 11,
            complete sequence
          Length = 157440

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 59   tacattgttacaaattgtgtaaaaact 85
            |||||| ||| ||||||||||||||||
Sbjct: 9141 tacatttttagaaattgtgtaaaaact 9167
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>gb|AC159103.1| Mus musculus BAC clone RP23-424O13 from chromosome 14, complete sequence
          Length = 195391

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     tgtaaaaactgaaaagaaa 94
              |||||||||||||||||||
Sbjct: 177472 tgtaaaaactgaaaagaaa 177454
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>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171184

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 81     aaactgaaaagaaataata 99
              |||||||||||||||||||
Sbjct: 137241 aaactgaaaagaaataata 137223
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>gb|AC020728.4|AC020728 Homo sapiens BAC clone RP11-506H20 from 5, complete sequence
          Length = 201404

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 78   taaaaactgaaaagaaata 96
            |||||||||||||||||||
Sbjct: 8095 taaaaactgaaaagaaata 8077
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>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence
          Length = 219044

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 17493 acaatgctgaaacgatatattgt 17471
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>emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in linkage group 11,
             complete sequence
          Length = 155717

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 59    tacattgttacaaattgtgtaaaaact 85
             |||||| ||| ||||||||||||||||
Sbjct: 43593 tacatttttagaaattgtgtaaaaact 43619
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>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence
          Length = 198627

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 10     caatgctgacacgatatattgta 32
              ||||||||| |||||||||||||
Sbjct: 112377 caatgctgaaacgatatattgta 112399
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>emb|BX005204.7| Zebrafish DNA sequence from clone CH211-151G17, complete sequence
          Length = 146297

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 89764 acaatgctgaaacgatatattgt 89742
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>emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in linkage group 12,
              complete sequence
          Length = 138570

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     aaaaactgaaaagaaataa 97
              |||||||||||||||||||
Sbjct: 129946 aaaaactgaaaagaaataa 129964
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>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    attgtgtaaaaactgaaaa 90
             |||||||||||||||||||
Sbjct: 36910 attgtgtaaaaactgaaaa 36928
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>emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in linkage group 4,
             complete sequence
          Length = 166156

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 69    caaattgtgtaaaaactgaaaag 91
             ||||||||| |||||||||||||
Sbjct: 48893 caaattgtgcaaaaactgaaaag 48871
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>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
              complete sequence
          Length = 236784

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 9      acaatgctgacacgatatattgt 31
              |||||||||| ||||||||||||
Sbjct: 183305 acaatgctgaaacgatatattgt 183327
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>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence
          Length = 208233

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aaaaactgaaaagaaataa 97
             |||||||||||||||||||
Sbjct: 99974 aaaaactgaaaagaaataa 99956
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>emb|AL929115.9| Zebrafish DNA sequence from clone CH211-146M13 in linkage group 7,
             complete sequence
          Length = 148315

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 10    caatgctgacacgatatattgta 32
             ||||||||| |||||||||||||
Sbjct: 96191 caatgctgaaacgatatattgta 96213
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>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete
             sequence
          Length = 166277

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 71    aattgtgtaaaaactgaaa 89
             |||||||||||||||||||
Sbjct: 66621 aattgtgtaaaaactgaaa 66603
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>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 52     accacagtacattgttacaaatt 74
              ||||||||||| |||||||||||
Sbjct: 134179 accacagtacagtgttacaaatt 134201
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>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17,
             complete sequence
          Length = 156881

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 10    caatgctgacacgatatattgta 32
             ||||||||| |||||||||||||
Sbjct: 58368 caatgctgaaacgatatattgta 58390
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>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17,
             complete sequence
          Length = 154493

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 10    caatgctgacacgatatattgta 32
             ||||||||| |||||||||||||
Sbjct: 52987 caatgctgaaacgatatattgta 52965
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>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence
          Length = 193193

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 9     acaatgctgacacgatatattgt 31
             |||||||||| ||||||||||||
Sbjct: 16095 acaatgctgaaacgatatattgt 16073
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>dbj|AP006427.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45A23, TM0318,
             complete sequence
          Length = 117676

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 77    gtaaaaactgaaaagaaat 95
             |||||||||||||||||||
Sbjct: 65807 gtaaaaactgaaaagaaat 65825


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,270,193
Number of Sequences: 3902068
Number of extensions: 1270193
Number of successful extensions: 100879
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100661
Number of HSP's gapped (non-prelim): 213
length of query: 99
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 78
effective length of database: 17,151,101,840
effective search space: 1337785943520
effective search space used: 1337785943520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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