ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl46b08 |
|---|---|
| Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 321 SPASRAILLRPPLPSPMIQDP-PPQSSQPLAD*KKIPALSFF 199 SP+ + +PP PSP P PP S P K IPA+ FF Sbjct: 88 SPSPKPSPPKPPAPSPKPSPPKPPAPSPPKPQNKTIPAVFFF 129
>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)| (Fragment) Length = 232 Score = 30.8 bits (68), Expect = 0.89 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -2 Query: 291 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLIGRLQSLFFSLYIEFLEGK 133 PP PSP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 166 PPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 209
>MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 precursor| (Muscle attachment abnormal protein 3) Length = 3767 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = -1 Query: 163 QSVYRVLRGQESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLFTCFNE 14 ++V + L G ++ G + + LN + R+ PC + +C P+ CF+E Sbjct: 589 ETVCKCLLGYKNVGTK---THLNCQMEKRANPCQDYSLHDCDPVAECFSE 635
>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic| protein 2d) (PIP2d) Length = 286 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 267 QDPPPQSSQPLAD*KKIPALSFFRLLIGRLQSLFFSLYIEFL 142 QDPPP+ PL D ++ SF+R LI + LY+ + Sbjct: 18 QDPPPE---PLFDATELGKWSFYRALIAEFIATLLFLYVTIM 56
>Y9128_RHOBA (Q7UM18) UPF0314 protein RB9128| Length = 201 Score = 28.9 bits (63), Expect = 3.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 134 REFWCPCHSFIPKFICIWQKHS 69 R FWC C S++P IW H+ Sbjct: 44 RRFWCECGSWVPWSWDIWTAHN 65
>RT15_HUMAN (P82914) 28S ribosomal protein S15, mitochondrial precursor (S15mt)| (MRP-S15) Length = 257 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2 Query: 315 ASRAILLRPPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLIGRLQSLFFSLYIEFLEG 136 A+R ++R P S + DPPP S L D + +P + ++ RL SL + E L+ Sbjct: 49 AARGYVVRKPAQSRLDDDPPP--STLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKI 106 Query: 135 KR 130 K+ Sbjct: 107 KQ 108
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/52 (40%), Positives = 24/52 (46%) Frame = -2 Query: 291 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLIGRLQSLFFSLYIEFLEG 136 PP P P PPP P A K ALSF + RLQ L +E L+G Sbjct: 360 PPPPPPPPPPPPPPPPPPPASTKPPQALSFAK----RLQQL-----VEVLKG 402
>TRMB_NITOC (Q3JCB2) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 236 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 133 ESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLF 29 ESF R I SF+ GR TP +K + WP + Sbjct: 12 ESFQPRPITSFVRR--EGRMTPAQKKALEHLWPRY 44
>GALE_NEIGO (Q05026) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -1 Query: 88 VSGRSTPCYQKMIRECWPLFTCFNEH 11 ++GR+ P YQ IR+C L F+EH Sbjct: 47 ITGRNIPFYQGDIRDCQILRQIFSEH 72
>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 421 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -2 Query: 291 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLIGRLQSLFFSLYIEFLEGK 133 PP SP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 355 PPPASPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 398
>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference| protein 3) Length = 980 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 321 SPASRAILLRPPLPSPMIQDPPPQSSQPLA 232 SP S+ RPP P P+ PP ++PLA Sbjct: 266 SPTSKGSPRRPPPPPPLPTVPPIGPARPLA 295
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -2 Query: 294 RPPLPSPMIQDPPPQSSQP 238 +PP P P Q PPP QP Sbjct: 1666 QPPPPQPQQQPPPPPQQQP 1684
>MRP_AQUAE (O66946) Protein mrp homolog| Length = 364 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -2 Query: 267 QDPPPQSSQPLAD*KKIPAL 208 Q PPPQ+ QP+ KK+P + Sbjct: 92 QTPPPQTQQPMFTRKKVPGV 111
>CHKA_RAT (Q01134) Choline kinase alpha (EC 2.7.1.32) (CK) (CHETK-alpha)| Length = 453 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 Query: 312 SRAILLRPPLPSPMIQDPPPQSSQPLAD 229 S+ + L PP P P+ PPP S PLAD Sbjct: 51 SQPLALPPPPPPPLPLPPPP--SPPLAD 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,825,786 Number of Sequences: 219361 Number of extensions: 616558 Number of successful extensions: 3005 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2289 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2948 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
