Clone Name | rbastl46b05 |
---|---|
Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 121 bits (303), Expect = 5e-28 Identities = 60/66 (90%), Positives = 60/66 (90%), Gaps = 5/66 (7%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEMGI 164 EEFKES RKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDPTDEKMVMEMGI Sbjct: 871 EEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGI 930 Query: 163 PNSISI 146 PNSISI Sbjct: 931 PNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 89.7 bits (221), Expect = 2e-18 Identities = 41/59 (69%), Positives = 48/59 (81%) Frame = -3 Query: 322 FKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146 F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNSISI Sbjct: 874 FQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 49.7 bits (117), Expect = 2e-06 Identities = 24/62 (38%), Positives = 37/62 (59%) Frame = -3 Query: 331 SEEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSI 152 + EF R+ E+++ N DP R+NR GAG++PY L+ PS G + G+PNS+ Sbjct: 843 AREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNSV 897 Query: 151 SI 146 +I Sbjct: 898 TI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 48.5 bits (114), Expect = 4e-06 Identities = 28/61 (45%), Positives = 36/61 (59%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 E+F ++ +D NN+P+ KNR GAG+VPY LL+ P E V GIPNSIS Sbjct: 841 EKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNSIS 895 Query: 148 I 146 I Sbjct: 896 I 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 45.8 bits (107), Expect = 3e-05 Identities = 27/61 (44%), Positives = 35/61 (57%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 E+F E ++I + +DE N+D KNR G +PY LL PS E V GIPNS+S Sbjct: 804 EKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNSVS 858 Query: 148 I 146 I Sbjct: 859 I 859
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 43.5 bits (101), Expect = 1e-04 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 5/66 (7%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGI 164 + FK ++V+ ++ + N + KNR+G +PY+LL P+ D T EK + MGI Sbjct: 812 DAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGI 871 Query: 163 PNSISI 146 PNSISI Sbjct: 872 PNSISI 877
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.1 bits (100), Expect = 2e-04 Identities = 26/59 (44%), Positives = 32/59 (54%) Frame = -3 Query: 322 FKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146 F R+ E ++ N D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 42.7 bits (99), Expect = 2e-04 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 161 E FK ++VE +V N+DP+ KNR+G PY+LL P+ D + GIP Sbjct: 798 EVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857 Query: 160 NSISI 146 NSISI Sbjct: 858 NSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 42.0 bits (97), Expect = 4e-04 Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIP 161 E FK ++ E +V N DP RKNR G PY LL P+ D D + GIP Sbjct: 806 EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 Query: 160 NSISI 146 NSISI Sbjct: 866 NSISI 870
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 42.0 bits (97), Expect = 4e-04 Identities = 27/61 (44%), Positives = 34/61 (55%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 E FK + + +DE N + KNR GAG+V Y LL+ PT E V MG+P SIS Sbjct: 841 ERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGVPYSIS 895 Query: 148 I 146 I Sbjct: 896 I 896
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 E FK +K+ E ++ + NND +NR+G +PY LL PS E+ + GIPN Sbjct: 808 EAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPN 862 Query: 157 SISI 146 SISI Sbjct: 863 SISI 866
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 E FK+ K+ E ++ + NND +NRHG +PY LL PS ++ + GIPN Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPN 857 Query: 157 SISI 146 SISI Sbjct: 858 SISI 861
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 40.4 bits (93), Expect = 0.001 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEMGIP 161 E FK R++VE +V N DP KNR G PY L+ P+ D + + GIP Sbjct: 799 EAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIP 858 Query: 160 NSISI 146 NSISI Sbjct: 859 NSISI 863
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 40.0 bits (92), Expect = 0.001 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 161 E F+ ++VE +V N D KNR+G PY+LL P+ D T + GIP Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861 Query: 160 NSISI 146 NSISI Sbjct: 862 NSISI 866
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -3 Query: 307 RKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPNSISI 146 ++I +D N D KNR GAG++PY L++P SD T MGIPNS SI Sbjct: 893 KEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MGIPNSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/54 (42%), Positives = 31/54 (57%) Frame = -3 Query: 307 RKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146 ++I +D N D KNR GAG++PY L++ P + V MGIPNS SI Sbjct: 876 KEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIPNSTSI 924
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 39.7 bits (91), Expect = 0.002 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 E FK +K+ E ++ E N D +NR+G +PY LL PS E+ + GIPN Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPN 849 Query: 157 SISI 146 SISI Sbjct: 850 SISI 853
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 37.7 bits (86), Expect = 0.007 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRK-NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSI 152 ++F ++I E++ NNDP + NR G +PY LL PS E+ + GIPNSI Sbjct: 783 QKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSI 837 Query: 151 SI 146 SI Sbjct: 838 SI 839
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 37.7 bits (86), Expect = 0.007 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 E FK K+ + ++ E NND +NR G +PY LL PS ++ + GIPN Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPN 853 Query: 157 SISI 146 SISI Sbjct: 854 SISI 857
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 37.4 bits (85), Expect = 0.009 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 ++F ++I E++ NND NR G +PY LL P+ T GIPNSIS Sbjct: 811 QKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNSIS 864 Query: 148 I 146 I Sbjct: 865 I 865
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 35.8 bits (81), Expect = 0.027 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 + F + ++I E++ N D +NR+G +PY +L P+ +++ + GIPNSIS Sbjct: 806 KRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSIS 861 Query: 148 I 146 I Sbjct: 862 I 862
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 35.8 bits (81), Expect = 0.027 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 ++F +I ++ NNDP +R G +PY LL PS ++ + GIPNSIS Sbjct: 809 QKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNSIS 863 Query: 148 I 146 I Sbjct: 864 I 864
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 35.4 bits (80), Expect = 0.036 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 158 E FK K+ +++ N+DP +NR G +PY LL S E+ + GIPN Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPN 860 Query: 157 SISI 146 SISI Sbjct: 861 SISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 34.3 bits (77), Expect = 0.080 Identities = 23/61 (37%), Positives = 30/61 (49%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 E F + I ++ N+ KNR G VPY LL PT E+ + GIPNS+S Sbjct: 804 ERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNSVS 858 Query: 148 I 146 I Sbjct: 859 I 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 32.7 bits (73), Expect = 0.23 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 + F + I +Q+ + N D NR G PY LL PT E + GIPNS+S Sbjct: 806 DRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNSVS 860 Query: 148 I 146 I Sbjct: 861 I 861
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 299 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 141 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 31.6 bits (70), Expect = 0.52 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = -3 Query: 328 EEFKESPRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPS 209 E FK +K+ E ++ + NND +NR G +PY LL PS Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 31.2 bits (69), Expect = 0.67 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = -3 Query: 328 EEFKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSIS 149 E F I +Q+ + N + NR G PY LL P T E + GIPNS+S Sbjct: 805 ERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFP-----TSEGGLTGKGIPNSVS 859 Query: 148 I 146 I Sbjct: 860 I 860
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = -3 Query: 322 FKESPRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 200 FK PRK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756
>CPD1_DROME (P22058) Chromosomal protein D1| Length = 355 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -2 Query: 320 QGEPQEDRGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDG 168 +G P +++G+ G QR RP K ++ ++ + G EDGDGDG Sbjct: 36 RGRPAKNKGSSGGGGQRGRPPKASKIQNDEDPEDE-------GEEDGDGDG 79
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 Query: 289 VDEWNNDPDRKNRHGAGMVPYV 224 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 266 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 162 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 82 WPGGGYNGNEHQIIIKGHDDIYI 14 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 44 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 139 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,492,519 Number of Sequences: 219361 Number of extensions: 1093374 Number of successful extensions: 2963 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2939 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)