>PROB1_PSEHT (Q3IEY8) Glutamate 5-kinase 1 (EC 2.7.2.11) (Gamma-glutamyl kinase|
           1) (GK 1)
          Length = 368

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -1

Query: 267 CDRASDVAEKHVYFAVADNM*NQVLNSEDNTIILA*TSSYLSCIFGY 127
           C R  ++   H  FA+ D +   ++ SED T +   T++Y SC+  +
Sbjct: 293 CIRGDEIMAVHGEFAIGDTI---LVRSEDGTRLAKATANYSSCLLSF 336

>PGK_LACJO (P62413) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 403

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 202 ISHIISHGEINMLLCHVARPVADQDKKTL 288
           I +II HG   +LL H+ R  +D DKK L
Sbjct: 44  IKYIIDHGGKAILLSHLGRVKSDADKKEL 72

>USH2A_HUMAN (O75445) Usherin precursor (Usher syndrome type-2A protein) (Usher|
            syndrome type IIa protein)
          Length = 5202

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 113  CCQNSVLAMS---CNAVNRQALYYVCCGMIMSGML 18
            CC+  ++  S   CN V    L YVC   I +GM+
Sbjct: 3358 CCETELIPKSQKCCNGVGYNPLKYVCSDKISTGMM 3392

>VCAP_EHV1V (Q6S6S9) Major capsid protein (MCP) (Capsid protein VP5)|
          Length = 1376

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 209 CEIKSLIVKTIQSY*---HEHRLIYHVYLVMMASLCCQNSVLAMSCNAVNRQALYYV 48
           C +  LI++ I SY    H+   + + Y++M  +    N  L   C A+ R  L +V
Sbjct: 641 CALARLIIQCIVSYWRNTHQVAFVNNFYMIMYINAYLGNGELPEECTAIYRDLLEHV 697

>VCAP_EHV1B (P28920) Major capsid protein (MCP) (Capsid protein VP5)|
          Length = 1376

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 209 CEIKSLIVKTIQSY*---HEHRLIYHVYLVMMASLCCQNSVLAMSCNAVNRQALYYV 48
           C +  LI++ I SY    H+   + + Y++M  +    N  L   C A+ R  L +V
Sbjct: 641 CALARLIIQCIVSYWRNTHQVAFVNNFYMIMYINAYLGNGELPEECTAIYRDLLEHV 697


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,516,129
Number of Sequences: 219361
Number of extensions: 591585
Number of successful extensions: 1198
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)