Clone Name | rbastl46a09 |
---|---|
Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 123 bits (309), Expect = 1e-28 Identities = 61/68 (89%), Positives = 63/68 (92%), Gaps = 5/68 (7%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEM 175 AFEEFKESTRKIVEQVDEW++DPDRKNRHGAGMVPYVLLRPS DGDPTDEKMVMEM Sbjct: 869 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEM 928 Query: 174 GIPNSISI 151 GIPNSISI Sbjct: 929 GIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 91.7 bits (226), Expect = 4e-19 Identities = 42/63 (66%), Positives = 51/63 (80%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F++ R I EQV+EW+ D R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNS Sbjct: 870 AFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNS 929 Query: 159 ISI 151 ISI Sbjct: 930 ISI 932
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/63 (46%), Positives = 37/63 (58%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AFE+F E ++I + +DE +DD KNR G +PY LL PS E V GIPNS Sbjct: 802 AFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPNS 856 Query: 159 ISI 151 +SI Sbjct: 857 VSI 859
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/63 (44%), Positives = 38/63 (60%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AFE+F ++ +D +++P+ KNR GAG+VPY LL+ P E V GIPNS Sbjct: 839 AFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNS 893 Query: 159 ISI 151 ISI Sbjct: 894 ISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 48.9 bits (115), Expect = 3e-06 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 A EF R+ E+++ + DP R+NR GAG++PY L+ PS G + G+PNS Sbjct: 842 AAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNS 896 Query: 159 ISI 151 ++I Sbjct: 897 VTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 44.7 bits (104), Expect = 6e-05 Identities = 28/63 (44%), Positives = 36/63 (57%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AFE FK + + +DE + + KNR GAG+V Y LL+ PT E V MG+P S Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMGVPYS 893 Query: 159 ISI 151 ISI Sbjct: 894 ISI 896
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 44.3 bits (103), Expect = 8e-05 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIP 166 AF+ F I ++ + + + KNR+G +PY+LL P+ D T EK + MGIP Sbjct: 813 AFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872 Query: 165 NSISI 151 NSISI Sbjct: 873 NSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 43.1 bits (100), Expect = 2e-04 Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIPN 163 AF+ F +I +V + DP RKNR G PY LL P+ D D + GIPN Sbjct: 807 AFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPN 866 Query: 162 SISI 151 SISI Sbjct: 867 SISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 42.4 bits (98), Expect = 3e-04 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 4/67 (5%) Frame = -3 Query: 339 AFEEFKESTRKIVE---QVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMG 172 A E FK + ++VE +V + DP+ KNR+G PY+LL P+ D + G Sbjct: 796 ALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKG 855 Query: 171 IPNSISI 151 IPNSISI Sbjct: 856 IPNSISI 862
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 42.0 bits (97), Expect = 4e-04 Identities = 25/59 (42%), Positives = 32/59 (54%) Frame = -3 Query: 327 FKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 151 F R+ E ++ + D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F + +I E++ + ++D +NR+G +PY LL PS E+ + GIPNS Sbjct: 809 AFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNS 863 Query: 159 ISI 151 ISI Sbjct: 864 ISI 866
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 41.2 bits (95), Expect = 6e-04 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F + +I +++ E + D +NR+G +PY LL PS E+ + GIPNS Sbjct: 796 AFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPNS 850 Query: 159 ISI 151 ISI Sbjct: 851 ISI 853
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 40.8 bits (94), Expect = 8e-04 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 A++ F ++I +D + D KNR GAG++PY L++ P + V MGIPNS Sbjct: 867 AYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGIPNS 921 Query: 159 ISI 151 SI Sbjct: 922 TSI 924
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPN 163 AF F + +I +V + D KNR+G PY+LL P+ D T + GIPN Sbjct: 803 AFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPN 862 Query: 162 SISI 151 SISI Sbjct: 863 SISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 40.4 bits (93), Expect = 0.001 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -3 Query: 339 AFEEFKESTRKIVE---QVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEMG 172 A E FK +R++VE +V + DP KNR G PY L+ P+ D + + G Sbjct: 797 ALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARG 856 Query: 171 IPNSISI 151 IPNSISI Sbjct: 857 IPNSISI 863
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 40.4 bits (93), Expect = 0.001 Identities = 23/63 (36%), Positives = 37/63 (58%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF++F +I +++ + ++D +NRHG +PY LL PS ++ + GIPNS Sbjct: 804 AFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPNS 858 Query: 159 ISI 151 ISI Sbjct: 859 ISI 861
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 39.7 bits (91), Expect = 0.002 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPN 163 A+ F ++I +D + D KNR GAG++PY L++P SD T MGIPN Sbjct: 884 AYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MGIPN 937 Query: 162 SISI 151 S SI Sbjct: 938 STSI 941
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 38.5 bits (88), Expect = 0.004 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRK-NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 163 AF++F ++I E++ ++DP + NR G +PY LL PS E+ + GIPN Sbjct: 781 AFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPN 835 Query: 162 SISI 151 SISI Sbjct: 836 SISI 839
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 38.1 bits (87), Expect = 0.005 Identities = 21/63 (33%), Positives = 37/63 (58%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F + ++I E++ + D +NR+G +PY +L P+ +++ + GIPNS Sbjct: 804 AFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNS 859 Query: 159 ISI 151 ISI Sbjct: 860 ISI 862
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 38.1 bits (87), Expect = 0.005 Identities = 23/63 (36%), Positives = 33/63 (52%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF++F ++I E++ ++D NR G +PY LL P+ T GIPNS Sbjct: 809 AFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPNS 862 Query: 159 ISI 151 ISI Sbjct: 863 ISI 865
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F +I ++ E ++D +NR G +PY LL PS ++ + GIPNS Sbjct: 800 AFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPNS 854 Query: 159 ISI 151 ISI Sbjct: 855 ISI 857
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 37.0 bits (84), Expect = 0.012 Identities = 23/63 (36%), Positives = 32/63 (50%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F I +++ + DP +NR G +PY LL S E+ + GIPNS Sbjct: 807 AFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPNS 861 Query: 159 ISI 151 ISI Sbjct: 862 ISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 36.6 bits (83), Expect = 0.016 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AFE F + I ++ + KNR G VPY LL PT E+ + GIPNS Sbjct: 802 AFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNS 856 Query: 159 ISI 151 +SI Sbjct: 857 VSI 859
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 36.6 bits (83), Expect = 0.016 Identities = 22/63 (34%), Positives = 34/63 (53%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF++F +I ++ ++DP +R G +PY LL PS ++ + GIPNS Sbjct: 807 AFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPNS 861 Query: 159 ISI 151 ISI Sbjct: 862 ISI 864
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 35.0 bits (79), Expect = 0.046 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AF+ F + I +Q+ + + D NR G PY LL PT E + GIPNS Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNS 858 Query: 159 ISI 151 +SI Sbjct: 859 VSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 33.5 bits (75), Expect = 0.13 Identities = 23/63 (36%), Positives = 30/63 (47%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 160 AFE F I +Q+ + + + NR G PY LL PT E + GIPNS Sbjct: 803 AFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGGLTGKGIPNS 857 Query: 159 ISI 151 +SI Sbjct: 858 VSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -3 Query: 339 AFEEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPS 214 AF+ F + +I +++ + ++D +NR G +PY LL PS Sbjct: 690 AFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>CHLD_PEA (O22437) Magnesium-chelatase subunit chlD, chloroplast precursor| (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) Length = 754 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -3 Query: 333 EEFKESTRKIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMV 184 +E E + EQ +E +DD D +N +P + ++G DEK++ Sbjct: 415 QESNEEQNEEEEQEEEEEDDNDEENEQQQDQLPEEFIFDAEGGLVDEKLL 464
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.5 bits (62), Expect = 4.3 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 294 VDEWDDDPDRKNRHGAGMVPYV 229 +D+W P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>GCSH_BACHD (Q9K786) Glycine cleavage system H protein| Length = 128 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -3 Query: 309 KIVEQVDEWDDDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 187 K+VE +E DD+P+ N +++ PSD +E M Sbjct: 76 KVVEVNEELDDNPEYVNESPYEKAWMIVVEPSDASQVEELM 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,386,278 Number of Sequences: 219361 Number of extensions: 987800 Number of successful extensions: 2575 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2552 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)