>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 258 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 356
           L TII+ H T  K T +NW L+  ++ C  + K
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161

>RFC1_DROME (P35600) Activator 1 140 kDa subunit (Replication factor C large|
           subunit) (Germline transcription factor 1)
          Length = 986

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -2

Query: 236 LVSRRRRPNSCWSLGMNKAFFSS 168
           LV +R R NS WSL   +AFFSS
Sbjct: 747 LVEKRIRANSAWSLLPTQAFFSS 769

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 114  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 22
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349

>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 2   ISQNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 115
           + +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 34  LKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69

>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)|
          Length = 741

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 215 PNSCWSLGMNKAFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSILSVTIYRV 48
           P+S W+  M++ FF +SV W + V P  +      Y   N   WF+ + ++  + V
Sbjct: 568 PDSEWTCPMDRVFFDASVIWGL-VGPRRMFGNLGEYAAIN---WFFLVGAIAPFFV 619

>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)|
          Length = 722

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -2

Query: 215 PNSCWSLGMNKAFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFW 78
           PNS W+   ++ FF +SV W + V P  +     +Y   N   WF+
Sbjct: 524 PNSPWTCPSDRVFFDASVIWGL-VGPKRIFGRLGNYPALN---WFF 565

>LGT_MANSM (Q65VJ7) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 15/55 (27%)
 Frame = -2

Query: 242 WILVSRRRRPNSCWSL---------GMNKAFFSSSV------KWDVFVSPPMLLF 123
           W+ V R  RP+S W++         G    F    +      +WD+FV  P  LF
Sbjct: 39  WLAVKRANRPDSGWTVEQVDNLLFNGFAGVFLGGRIGYVLFYQWDLFVQEPSYLF 93

>DNAA_HELPJ (Q9ZJ96) Chromosomal replication initiator protein dnaA|
          Length = 457

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -2

Query: 284 YMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFSSS 165
           Y SV   LEE K P+IL  R    N    L   K  F+SS
Sbjct: 417 YSSVKKMLEEEKSPFILSLREEIKNRLNELNDKKTAFNSS 456

>BIME_EMENI (P24686) Negative regulator of mitosis|
          Length = 2073

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 162  DRRRKKSLVHSQAPARVRPPSPRDQNPWL 248
            D R K+ ++ S  PAR RP S     PWL
Sbjct: 1946 DAREKELVLPSSFPARPRPSSTPHDAPWL 1974

>Y103_MYCPN (P75566) Hypothetical protein MPN103 (C09_orf172)|
          Length = 172

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = -2

Query: 236 LVSRRRRPNSCWSLGMNKAFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSILSVTI 57
           ++  R    S WS G  ++ F++ + W  F S   L FLF+ +       WFW IL +  
Sbjct: 53  IIGNRWLFRSFWSTGTLRSIFNTRILW-FFRS---LRFLFNYFN-----WWFWFILDLLK 103

Query: 56  Y 54
           Y
Sbjct: 104 Y 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,235,784
Number of Sequences: 219361
Number of extensions: 1204452
Number of successful extensions: 3489
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3489
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)