>PTMS_HUMAN (P20962) Parathymosin|
          Length = 101

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = -1

Query: 444 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 346
           EE+ NGA+E  E  ++  ++E  GE+ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE 70

>PTMS_MOUSE (Q9D0J8) Parathymosin|
          Length = 100

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = -1

Query: 444 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDDPSQ 337
           EE+ NGA+E  E  ++  +D+  G++ D ++++  +
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEDE 73

>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)|
          Length = 101

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 444 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 346
           EE+ NGA+E  E  ++  +D+  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEDDDEGDEEDEEEEE 70

>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -1

Query: 435 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 322
           +NG+D+ A+P++  AQ++     +D+D++D S   +VS
Sbjct: 567 TNGSDDGAQPSTSTAQEQDDVLIVDSDEEDSSNNADVS 604

>PTMS_BOVIN (P08814) Parathymosin|
          Length = 101

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 444 EEQSNGADESAEPASDGAQDEHVGEQMDTDKDD 346
           EE+ NGA+E  E  ++  ++E  G++ D ++++
Sbjct: 38  EEEENGAEEEEEETAEDGEEEDDGDEEDEEEEE 70

>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/38 (31%), Positives = 26/38 (68%)
 Frame = -1

Query: 435 SNGADESAEPASDGAQDEHVGEQMDTDKDDPSQA*EVS 322
           +NG+D+ A+P++  AQ++     +D+D++ PS + + S
Sbjct: 565 ANGSDDGAQPSTSTAQEQDDVLIVDSDEEGPSNSTDCS 602

>YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1 intergenic|
           region
          Length = 267

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 197 LQKLSM-FYSYPHNV*KQPFLLSP*QAKSTIAQPIMDIKSPQIDTSYAWEGSSLSVSICS 373
           LQKL    Y  P  +  QP LL     K  I   +   K     T Y    +S+ V++CS
Sbjct: 16  LQKLDTNVYFGPCEILTQPILLQYENIKFIIGVNLSTEKIASFYTQYFRNSNSVVVNLCS 75

Query: 374 PTCSS*APSLA 406
           PT ++ A   A
Sbjct: 76  PTTAAVATKKA 86

>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 716

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 115 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 252
           KP+ FC MH  N V + PL+E  +   ++ ET+  V+  +S+  KT I
Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489

>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium|
           channel protein type VII alpha subunit) (Putative
           voltage-gated sodium channel alpha subunit Nax) (Sodium
           channel protein, cardiac and skeletal muscle
           alpha-subunit)
          Length = 1682

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +3

Query: 144 KRRQRKTAIGGGKDV*KHCRNSPCSTHILTTYENSHSFYRPSRPK 278
           K  Q K+  GG K+  K   +S CST  +   E    FY   R K
Sbjct: 851 KEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMFYGGERSK 895

>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein|
          Length = 442

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 29  ESLWATVDKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 166
           ES++ T +K YNVM+HRH     E M P         CQ +S  ++
Sbjct: 74  ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109

>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 444 EEQSNGADESAEPASDGAQDEHVGEQMDTDKD 349
           E++ +G DE  E   DG +D   GE+ D D+D
Sbjct: 309 EDEDDGEDEEDEEGEDGGEDGEDGEE-DEDED 339


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,407,219
Number of Sequences: 219361
Number of extensions: 1408943
Number of successful extensions: 3953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3940
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)