ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl46a03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 250 attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 305 ||||||||||||||||||| | |||||| | | ||||| |||||||||| |||||| Sbjct: 22320973 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 22320918
>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full insert sequence Length = 3754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 250 attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 305 ||||||||||||||||||| | |||||| | | ||||| |||||||||| |||||| Sbjct: 3621 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 3566
>dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C12, full insert sequence Length = 1344 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 250 attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 305 ||||||||||||||||||| | |||||| | | ||||| |||||||||| |||||| Sbjct: 1205 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 1150
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 250 attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 305 ||||||||||||||||||| | |||||| | | ||||| |||||||||| |||||| Sbjct: 71877 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 71822
>emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-201H11 on chromosome X Contains part of the IL1RAPL2 gene for interleukin 1 receptor accessory protein-like 2, complete sequence Length = 32886 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 ttctgggaaaatgaagaagaaa 276 |||||||||||||||||||||| Sbjct: 21224 ttctgggaaaatgaagaagaaa 21203
>gb|AC053523.5| Homo sapiens BAC clone RP11-563J6 from 2, complete sequence Length = 172405 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 agaaataatgcaaaattttaga 25 |||||||||||||||||||||| Sbjct: 152557 agaaataatgcaaaattttaga 152536
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 aaaatgaagaagaaaatcctca 283 |||||||||||||||||||||| Sbjct: 176727 aaaatgaagaagaaaatcctca 176748
>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete sequence Length = 142565 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 agaagtataaaaaagaaaacatccta 197 ||||||||||||||||||| |||||| Sbjct: 132173 agaagtataaaaaagaaaagatccta 132148
>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence Length = 141921 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ggtagttacccaaactcttca 417 ||||||||||||||||||||| Sbjct: 121300 ggtagttacccaaactcttca 121320
>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence Length = 218746 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aaatgaagaagaaaatcctca 283 ||||||||||||||||||||| Sbjct: 208786 aaatgaagaagaaaatcctca 208806
>gb|AC073332.13| Homo sapiens BAC clone RP11-435M6 from 7, complete sequence Length = 132191 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 ctttcttttctgaaacaagga 162 ||||||||||||||||||||| Sbjct: 101856 ctttcttttctgaaacaagga 101836
>gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, complete sequence Length = 157222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aaatgaagaagaaaatcctca 283 ||||||||||||||||||||| Sbjct: 105136 aaatgaagaagaaaatcctca 105156
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aaacacaacattaaaagaaaa 69 ||||||||||||||||||||| Sbjct: 297824 aaacacaacattaaaagaaaa 297804
>emb|AL160175.5| Human DNA sequence from clone RP11-243J16 on chromosome 20 Contains the BCL2L1 gene for the apoptosis regulator BCL2-like 1, the C20orf1 gene encoding the targeting protein for XKLP2 (FLS353), the MYLK gene for myosin light chain kinase 2 (skeletal muscle), the FKHL18 gene for forkhead-like 18 (Drosophila)(FREAC10), an ATP synthase H+ transporting mitochondrial F0 complex subunit f isoform 2 (ATP5J2) pseudogene, the DUSP15 gene for dual specificity phosphatase-like 15, the 3' end of a novel gene, the 5' end of the C20orf125 gene and seven CpG islands, complete sequence Length = 168860 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 gagaagtataaaaaagaaaac 191 ||||||||||||||||||||| Sbjct: 21072 gagaagtataaaaaagaaaac 21052
>ref|XM_693513.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1 (LOC570080), mRNA Length = 11034 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 aaccacttttcagcatggaaa 304 ||||||||||||||||||||| Sbjct: 447 aaccacttttcagcatggaaa 467
>ref|XM_693217.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1 (LOC569810), mRNA Length = 11022 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 aaccacttttcagcatggaaa 304 ||||||||||||||||||||| Sbjct: 447 aaccacttttcagcatggaaa 467
>emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in linkage group 3, complete sequence Length = 174108 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 aaccacttttcagcatggaaa 304 ||||||||||||||||||||| Sbjct: 147114 aaccacttttcagcatggaaa 147094
>emb|BX004999.8| Zebrafish DNA sequence from clone DKEY-66I24 in linkage group 3, complete sequence Length = 168839 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 aaccacttttcagcatggaaa 304 ||||||||||||||||||||| Sbjct: 132305 aaccacttttcagcatggaaa 132285
>gb|AY996787.1| Cunninghamella elegans unknown mRNA Length = 916 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 aaaaaagaaaacatcctattc 200 ||||||||||||||||||||| Sbjct: 655 aaaaaagaaaacatcctattc 675
>gb|AC009962.11| Homo sapiens BAC clone RP11-366L5 from 2, complete sequence Length = 177512 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 agaaaattatgcaaaatttta 84 ||||||||||||||||||||| Sbjct: 51140 agaaaattatgcaaaatttta 51120
>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence Length = 198278 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 aaaagaaaattatgcaaaattttagatca 89 |||| ||||||||||||||||||| |||| Sbjct: 181709 aaaaaaaaattatgcaaaattttatatca 181737
>gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosome 14, complete sequence Length = 214057 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cacttttcagcatggaaaag 306 |||||||||||||||||||| Sbjct: 112030 cacttttcagcatggaaaag 112049
>gb|AC113448.14| Mus musculus chromosome 15, clone RP23-1N23, complete sequence Length = 216103 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aacacaacattaaaagaaaa 69 |||||||||||||||||||| Sbjct: 11439 aacacaacattaaaagaaaa 11458
>gb|BC070806.1| Xenopus laevis hypothetical protein MGC83879, mRNA (cDNA clone MGC:83879 IMAGE:6857015), complete cds Length = 3504 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 aacacaacattaaaagaaaa 69 |||||||||||||||||||| Sbjct: 3324 aacacaacattaaaagaaaa 3305
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 taaaagaaaattatgcaaaatttt 83 ||||||| |||||||||||||||| Sbjct: 5000069 taaaagataattatgcaaaatttt 5000092
>gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome 19, complete sequence Length = 203282 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 atgaaaactccccacagagctgaa 343 |||||||||| ||||||||||||| Sbjct: 146752 atgaaaactctccacagagctgaa 146775
>ref|XM_729807.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300415.00.0) partial mRNA Length = 501 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ttaaaagaaaattatgcaaa 78 |||||||||||||||||||| Sbjct: 427 ttaaaagaaaattatgcaaa 446
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence Length = 132894 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 attaaaagaaaattatgcaa 77 |||||||||||||||||||| Sbjct: 20311 attaaaagaaaattatgcaa 20330
>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence Length = 89758 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 attaaaagaaaattatgcaa 77 |||||||||||||||||||| Sbjct: 52459 attaaaagaaaattatgcaa 52478
>emb|CR352342.9| Zebrafish DNA sequence from clone CH211-134H7 in linkage group 12, complete sequence Length = 186937 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 aaaacatcctattctttctg 206 |||||||||||||||||||| Sbjct: 165214 aaaacatcctattctttctg 165233
>emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on chromosome 10 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 200536 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gagaagtataaaaaagaaaa 190 |||||||||||||||||||| Sbjct: 132440 gagaagtataaaaaagaaaa 132421
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 taaaagaaaattatgcaaaatttt 83 ||||||| |||||||||||||||| Sbjct: 64523 taaaagataattatgcaaaatttt 64546
>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the CHC1L gene for chromosome condensation 1-like, 3 novel genes and a CpG island, complete sequence Length = 114519 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gagaagtataaaaaagaaaa 190 |||||||||||||||||||| Sbjct: 83863 gagaagtataaaaaagaaaa 83844
>emb|AL034369.1|HSA149D17 Human DNA sequence from clone RP6-149D17 on chromosome Xq22.2-23 Contains the gene for a novel protein similar to pancreatic lipase-related protein 2 (PNLIPRP2), the 5' end of the COL4A6 gene for type IV alpha 6 collagen and the 5' end of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 122157 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ctttcttttctgaaacaagg 161 |||||||||||||||||||| Sbjct: 27341 ctttcttttctgaaacaagg 27322
>gb|AC160461.3| Mus musculus chromosome 15, clone RP23-174B9, complete sequence Length = 208877 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aacacaacattaaaagaaaa 69 |||||||||||||||||||| Sbjct: 44760 aacacaacattaaaagaaaa 44779
>emb|X97751.1|SCIV23 S.cerevisiae chrIV genes STE7, CLB3, MSH5, RPC53, RET1 Length = 23096 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ttctgggaaaatgaagaaga 274 |||||||||||||||||||| Sbjct: 16896 ttctgggaaaatgaagaaga 16877
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aaaaaagaaaacatcctatt 199 |||||||||||||||||||| Sbjct: 40476 aaaaaagaaaacatcctatt 40457
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aaaaaagaaaacatcctatt 199 |||||||||||||||||||| Sbjct: 28541 aaaaaagaaaacatcctatt 28522
>emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 in linkage group 4 Contains the ascl1a gene for achaete-scute complex-like 1a (Drosophila), the gene for a novel protein similar to vertebrate RecQ protein-like DNA helicase Q1-like (RECQL), the gene for a novel protein similar to tyrosine hydroxylase (th), the pah gene for phenylalanine hydroxylase, the 5' end of the gene for a novel protein similar to vertebrate uncharacterized hematopoietic stem/progenitor cells protein MDS028 (MDS028) and a CpG island, complete sequence Length = 166242 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tgggaaaatgaagaagaaaa 277 |||||||||||||||||||| Sbjct: 3466 tgggaaaatgaagaagaaaa 3485
>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence Length = 214098 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gaaaactccccacagagctg 341 |||||||||||||||||||| Sbjct: 83466 gaaaactccccacagagctg 83447
>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence Length = 189590 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtaaacacaacattaaaagaaaa 69 |||||||| ||||||||||||||| Sbjct: 4028 agtaaacaaaacattaaaagaaaa 4051
>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190858 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcctcaaaccacttttcagc 297 |||||||||||||||||||| Sbjct: 7843 tcctcaaaccacttttcagc 7862
>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence Length = 185819 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gagaagtataaaaaagaaaa 190 |||||||||||||||||||| Sbjct: 26079 gagaagtataaaaaagaaaa 26060
>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence Length = 171739 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 agtaaacacaacattaaaagaaaa 69 |||||||| ||||||||||||||| Sbjct: 122413 agtaaacaaaacattaaaagaaaa 122436
>emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chromosome 9, complete sequence Length = 26133 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tttcttttctgaaacaagga 162 |||||||||||||||||||| Sbjct: 15806 tttcttttctgaaacaagga 15825
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 taaaagaaaattatgcaaaatttt 83 ||||||| |||||||||||||||| Sbjct: 4999284 taaaagataattatgcaaaatttt 4999307
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aattatgcaaaattttagat 87 |||||||||||||||||||| Sbjct: 35699023 aattatgcaaaattttagat 35699042
>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete sequence Length = 173386 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gaaaatcctcaaaccacttt 292 |||||||||||||||||||| Sbjct: 62330 gaaaatcctcaaaccacttt 62311
>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence Length = 169417 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aacacaacattaaaagaaaa 69 |||||||||||||||||||| Sbjct: 24192 aacacaacattaaaagaaaa 24211
>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence Length = 182632 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aagaaaattatgcaaaattt 82 |||||||||||||||||||| Sbjct: 40769 aagaaaattatgcaaaattt 40788
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aattatgcaaaattttagat 87 |||||||||||||||||||| Sbjct: 59637 aattatgcaaaattttagat 59656
>emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in linkage group 24, complete sequence Length = 142977 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aaaaaagaaaacatcctattcttt 203 |||||| ||||||||||||||||| Sbjct: 82494 aaaaaaaaaaacatcctattcttt 82517
>emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in linkage group 4, complete sequence Length = 141185 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tgggaaaatgaagaagaaaa 277 |||||||||||||||||||| Sbjct: 59199 tgggaaaatgaagaagaaaa 59180
>emb|Z82056.1|CET26H5 Caenorhabditis elegans Cosmid T26H5, complete sequence Length = 19736 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 ttaaaagaaaattatgcaaaattt 82 ||||||||||||| |||||||||| Sbjct: 15873 ttaaaagaaaattctgcaaaattt 15850
>emb|Z74196.1|SCYDL148C S.cerevisiae chromosome IV reading frame ORF YDL148c Length = 3005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ttctgggaaaatgaagaaga 274 |||||||||||||||||||| Sbjct: 1666 ttctgggaaaatgaagaaga 1647
>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196431 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 aaaatgaagaagaaaatcctcaaa 285 ||||| |||||||||||||||||| Sbjct: 94938 aaaattaagaagaaaatcctcaaa 94915
>gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, complete sequence Length = 209585 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aaagctaaagcatggttgac 456 |||||||||||||||||||| Sbjct: 174930 aaagctaaagcatggttgac 174911
>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete sequence Length = 216611 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cacttttcagcatggaaaag 306 |||||||||||||||||||| Sbjct: 168711 cacttttcagcatggaaaag 168730
>gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, complete sequence Length = 221568 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 atgaaaactccccacagagctgaa 343 |||||||||| ||||||||||||| Sbjct: 23455 atgaaaactctccacagagctgaa 23478
>dbj|AP004504.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034b, complete sequence Length = 35858 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 aacacaacattaaaagaaaa 69 |||||||||||||||||||| Sbjct: 26936 aacacaacattaaaagaaaa 26917
>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete sequence Length = 173477 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ataaaaaagaaaacatccta 197 |||||||||||||||||||| Sbjct: 154817 ataaaaaagaaaacatccta 154798 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,598,560 Number of Sequences: 3902068 Number of extensions: 7598560 Number of successful extensions: 158691 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158343 Number of HSP's gapped (non-prelim): 348 length of query: 497 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 475 effective length of database: 17,147,199,772 effective search space: 8144919891700 effective search space used: 8144919891700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
