ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl46a02 |
|---|---|
| Clone Library Name | barley_pub |
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 252 HRDTTTISCAEGLYTLHLPGPPM*RASGAARLFPTAGTGPGHC 380 H SCA GL PGPP A+GAA +G C Sbjct: 123 HHPAAAPSCASGLLQTLNPGPPGPAATGAAEQLSPSGQRRNLC 165
>ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)| Length = 741 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = -2 Query: 384 DDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 D +D C R G+ G++ KPV++ + + + +L+H Sbjct: 699 DQVTKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEH 734
>ETR1_MALDO (O81122) Ethylene receptor (EC 2.7.13.3)| Length = 741 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 S D ++ C R G++G++ KPV++ + + +L+H Sbjct: 697 SIDKITKENCMRVGVDGVILKPVSVDKMRSVLSELLEH 734
>BIR1_SCHPO (O14064) Protein bir1 (Chromosome segregation protein cut17)| Length = 997 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 256 ETPQPSVVLKDSIHFISQGRQCDGLLEQPVYSRPLAPVPDI 378 ETP+ V K+ H QG + +QP+ S+P PD+ Sbjct: 437 ETPEQQKVEKEDEHLNLQGSFIEESTKQPISSKPSTSSPDM 477
>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/37 (29%), Positives = 25/37 (67%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQ 280 ++D + +++C G++G+L KPV+L + D + +L+ Sbjct: 694 NTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLE 730
>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)| Length = 735 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/38 (28%), Positives = 25/38 (65%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 ++D + +++C G++G+L KPV+L + + + L+H Sbjct: 691 NTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEH 728
>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)| Length = 740 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/38 (26%), Positives = 25/38 (65%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 ++D ++ C R G+ G++ KPV++ + + + ++L+H Sbjct: 697 NADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEH 734
>ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1)| Length = 754 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/38 (26%), Positives = 24/38 (63%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 ++D ++ C R G++G++ KPV++ + + +L+H Sbjct: 711 NTDRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLEH 748
>URE1_NOCFA (Q5YWR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 573 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 11/51 (21%) Frame = +1 Query: 259 TPQP-----------SVVLKDSIHFISQGRQCDGLLEQPVYSRPLAPVPDI 378 TPQP V S+HF+S+ DGL E+ R L V D+ Sbjct: 473 TPQPVLPRPMFGAAAPVAAATSLHFVSEHALADGLAERLAVRRKLVAVKDV 523
>ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.13.3) (NT-ETR1)| Length = 738 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/38 (26%), Positives = 24/38 (63%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 ++D ++ C R G++G++ KPV++ + + +L+H Sbjct: 695 NTDRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEH 732
>ETR1_PRUPE (Q9M7M1) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = -2 Query: 384 DDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 D ++ C R G++G++ KPV++ + + +L+H Sbjct: 696 DKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEH 731
>ETR1_PASED (Q9ZWL6) Ethylene receptor (EC 2.7.13.3) (PE-ETR1)| Length = 738 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 S+D ++ C R G++G + KPV++ + + +L+H Sbjct: 695 STDRMTKENCMRVGMDGAILKPVSVDKMRSVLSDLLEH 732
>DPOLQ_HUMAN (O75417) DNA polymerase theta (EC 2.7.7.7) (DNA polymerase eta)| Length = 1762 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 Query: 384 DDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVL 283 D NV C+R +N KP ALGD++ R + Sbjct: 402 DSNVTINCERIKLNTEENKPSHFQALGDDISRTV 435
>KAT1_RAT (Q08415) Kynurenine--oxoglutarate transaminase 1, mitochondrial| precursor (EC 2.6.1.7) (Kynurenine--oxoglutarate transaminase I) (Kynurenine aminotransferase I) (KATI) (Glutamine--phenylpyruvate transaminase) (EC 2.6.1.64) (Glutamine transaminas Length = 457 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -2 Query: 132 VHFAWFLWGRKGGEFWTR 79 VH W LWGRK G TR Sbjct: 10 VHLMWPLWGRKAGASLTR 27
>ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.13.3) (LeETR2)| Length = 736 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/38 (26%), Positives = 24/38 (63%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVLQH 277 ++D ++ C R G++G++ KPV++ + + +L+H Sbjct: 695 NTDQVTKENCLRVGMDGVILKPVSIDKMRSVLSGLLEH 732
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 Query: 372 RDRCQRSGINGLLQKPVTLAAL 307 + RC SG++ L KPVTL AL Sbjct: 911 KQRCLESGMDSCLSKPVTLDAL 932
>ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)| Length = 740 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTL 316 +SD ++ C R+G++GL+ KPV++ Sbjct: 696 NSDKVTKESCLRAGMDGLILKPVSI 720
>ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm-ETR1)| Length = 740 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = -2 Query: 390 SSDDNVRDRCQRSGINGLLQKPVTL 316 +SD ++ C R+G++GL+ KPV++ Sbjct: 696 NSDKVTKESCLRAGMDGLILKPVSI 720
>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-78KD) (CI-78KD) Length = 744 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 314 RPWEMKCIESFSTTDGCGVSVDHD 243 RPWE+K ES DG G ++ D Sbjct: 247 RPWELKKTESIDVLDGLGSNIRVD 270
>GLGL3_WHEAT (P12300) Glucose-1-phosphate adenylyltransferase large subunit,| chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) Length = 500 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +2 Query: 92 SPPFLPQRNQAKCTIPSFLFVHKCFM 169 SP +LP KC I + +H CF+ Sbjct: 366 SPRYLPPTKSDKCRIKEAIILHGCFL 391
>MTGA_HAEIN (P44890) Monofunctional biosynthetic peptidoglycan transglycosylase| (EC 2.4.2.-) (Monofunctional TGase) Length = 246 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 60 MIKPKKT*SKIPHLFFPKGTKRNVQFLPFC 149 M K K+ + + HLF PK K+N Q + FC Sbjct: 1 MKKTKRIFTALSHLFSPKWWKKNWQRVVFC 30 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,276,050 Number of Sequences: 219361 Number of extensions: 1045176 Number of successful extensions: 2585 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2585 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
