Clone Name | rbastl45h12 |
---|---|
Clone Library Name | barley_pub |
>Q300_MOUSE (Q02722) Protein Q300| Length = 77 Score = 30.0 bits (66), Expect = 1.6 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -3 Query: 74 CMCVCISVCVCTV 36 C+CVC+ VCVCT+ Sbjct: 30 CVCVCVCVCVCTL 42 Score = 27.7 bits (60), Expect = 7.9 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = -3 Query: 74 CMCVCISVCVC 42 C+CVC+ VCVC Sbjct: 28 CVCVCVCVCVC 38
>PHXR4_MOUSE (P15974) Putative per-hexamer repeat protein 4| Length = 95 Score = 29.3 bits (64), Expect = 2.7 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = -3 Query: 80 GECMCVCISVCVC 42 G C+CVC SVC+C Sbjct: 8 GVCLCVCFSVCMC 20
>LTB1S_MOUSE (Q8CG18) Latent transforming growth factor beta-binding protein,| isoform 1S precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1389 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Frame = +2 Query: 41 YRHKRLYIHTYTHPISKMLVTCFRENTLLQLFWPLPGL----*LCRRFITSRGFGNC 199 Y H++L H Y L CF+E Q LPGL C TS GF C Sbjct: 207 YSHQQLIPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKC 263
>CP6G1_DROME (Q9V674) Cytochrome P450 6g1 (EC 1.14.-.-) (CYPVIG1) (Cyp6-like| protein) Length = 524 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 142 TARFITVSAVHHQPWFWKLPLQLQQDR 222 T FI + A+HH P +W P Q +R Sbjct: 408 TPVFIPIYALHHDPKYWTNPSQFDPER 434
>KAPR_DICDI (P05987) cAMP-dependent protein kinase regulatory subunit| Length = 327 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +3 Query: 117 ILYFSCSGHCQVYNCVGGSSPAVVLE 194 + Y SG C +Y C G SP +V+E Sbjct: 102 LFYVIDSGICDIYVCQNGGSPTLVME 127
>CP4Z1_HUMAN (Q86W10) Cytochrome P450 4Z1 (EC 1.14.14.1) (CYPIVZ1)| Length = 505 Score = 28.1 bits (61), Expect = 6.1 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 151 FITVSAVHHQPWFWKLP 201 FI + A+HH P+FW+ P Sbjct: 405 FINIWALHHNPYFWEDP 421
>LTB1S_HUMAN (P22064) Latent transforming growth factor beta-binding protein,| isoform 1S precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1394 Score = 28.1 bits (61), Expect = 6.1 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Frame = +2 Query: 41 YRHKRLYIHTYTHPISKMLVTCFRENTLLQLFWPLPGL----*LCRRFITSRGFGNC 199 Y H+++ H Y L CF+E Q LPGL C TS GF C Sbjct: 212 YSHQQVIPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKC 268
>LTBP1_RAT (Q00918) Latent transforming growth factor beta-binding protein 1| precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta-1-BP-1) (Transforming growth factor beta-1-masking protein, large subunit) Length = 1712 Score = 28.1 bits (61), Expect = 6.1 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Frame = +2 Query: 41 YRHKRLYIHTYTHPISKMLVTCFRENTLLQLFWPLPGL----*LCRRFITSRGFGNC 199 Y H+++ H Y L CF+E Q LPGL C TS GF C Sbjct: 530 YSHQQVIPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKC 586
>LTB1L_HUMAN (Q14766) Latent transforming growth factor beta-binding protein,| isoform 1L precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1595 Score = 28.1 bits (61), Expect = 6.1 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Frame = +2 Query: 41 YRHKRLYIHTYTHPISKMLVTCFRENTLLQLFWPLPGL----*LCRRFITSRGFGNC 199 Y H+++ H Y L CF+E Q LPGL C TS GF C Sbjct: 413 YSHQQVIPHVYPVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKC 469
>CR015_HUMAN (Q96N68) Protein C18orf15| Length = 181 Score = 27.7 bits (60), Expect = 7.9 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -3 Query: 74 CMCVCISVCVC 42 CMCVC+ VC C Sbjct: 132 CMCVCVHVCAC 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,108,921 Number of Sequences: 219361 Number of extensions: 733125 Number of successful extensions: 2035 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1952 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2033 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)