ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
2dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 5e-34
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 153 5e-34
4emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb... 153 5e-34
5gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubi... 137 3e-29
6gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65... 62 1e-06
7gb|AY104559.1| Zea mays PCO133879 mRNA sequence 60 6e-06
8gb|BT016292.1| Zea mays clone Contig125 mRNA sequence 56 9e-05
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
10dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
11dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
12emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chro... 44 0.35
13emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chro... 44 0.35
14emb|AL596167.1| Listeria innocua Clip11262 complete genome, segm... 44 0.35
15gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 44 0.35
16emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on ch... 44 0.35
17gb|AY068187.1| Schmidtea mediterranea clone H.18.11b(T3) unknown... 42 1.4
18gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 5.5
19ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0... 40 5.5
20ref|NM_153585.3| Mus musculus CCR4-NOT transcription complex, su... 40 5.5
21ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containin... 40 5.5
22ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain contai... 40 5.5
23ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain contai... 40 5.5
24gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing ... 40 5.5
25gb|BC025554.1| Mus musculus CCR4-NOT transcription complex, subu... 40 5.5
26gb|BC036179.1| Mus musculus CCR4-NOT transcription complex, subu... 40 5.5
27gb|BC036178.1| Mus musculus CCR4-NOT transcription complex, subu... 40 5.5
28ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc fin... 40 5.5
29ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc fin... 40 5.5
30gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complet... 40 5.5
31ref|XM_761204.1| Theileria parva strain Muguga chromosome 1 hypo... 40 5.5
32gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete s... 40 5.5
33ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-d... 40 5.5
34gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dep... 40 5.5
35emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clo... 40 5.5
36dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein 40 5.5
37dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514 40 5.5
38dbj|AK149944.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.5
39dbj|AK157824.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 5.5
40ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containin... 40 5.5
41gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom... 40 5.5
42dbj|AK029103.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 5.5
43dbj|AK039464.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 5.5
44dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 5.5
45dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 5.5
46dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 5.5
47tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta prot... 40 5.5
48dbj|AK195804.1| Mus musculus cDNA, clone:Y1G0119K24, strand:minu... 40 5.5
49emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 ... 40 5.5
50gb|AC156834.2| Mus musculus BAC clone RP24-129O14 from 9, comple... 40 5.5
51gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal s... 40 5.5
52emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f1... 40 5.5
53gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 40 5.5
54gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63... 40 5.5
55emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 40 5.5
56emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on ch... 40 5.5
57gb|BC039183.1| Mus musculus CCR4-NOT transcription complex, subu... 40 5.5
58emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chro... 40 5.5
59dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds 40 5.5 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  153 bits (77), Expect = 5e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                            
Query: 256      ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 315
                |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 18389990 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 18389931

                                                                 
Query: 316      tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 364
                | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18389930 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 18389882
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>dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E02, full
           insert sequence
          Length = 650

 Score =  153 bits (77), Expect = 5e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                       
Query: 256 ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 315
           |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 519 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 460

                                                            
Query: 316 tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 364
           | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 459 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 411
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  153 bits (77), Expect = 5e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                            
Query: 256      ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 315
                |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 18316216 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 18316157

                                                                 
Query: 316      tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 364
                | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 18316156 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 18316108
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>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score =  153 bits (77), Expect = 5e-34
 Identities = 101/109 (92%)
 Strand = Plus / Minus

                                                                         
Query: 256   ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 315
             |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 41889 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 41830

                                                              
Query: 316   tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 364
             | ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 41829 tctttttcttatgtaccagctttgctctacacaaataaagcaacatcta 41781
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>gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubiquitin protease
            mRNA, partial cds
          Length = 1593

 Score =  137 bits (69), Expect = 3e-29
 Identities = 100/109 (91%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                        
Query: 256  ggagcagcaaataaagcaatcagtctcagctataaccatgtatacatgcccctaccaaaa 315
            |||| |||||||||||||||||||| | |||||||   ||||||||||||||||||||||
Sbjct: 1439 ggagaagcaaataaagcaatcagtcacggctataattctgtatacatgcccctaccaaaa 1380

                                                             
Query: 316  tatttttcttatgtaccagctttgctctacacaaacaaagcaacatcta 364
            | |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1379 tctttt-cttatgtaccagctttgctctacacaaataaagcaacatcta 1332
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>gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65 mRNA sequence
          Length = 741

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 330 accagctttgctctacacaaacaaagcaacatcta 364
           ||||||||||||||||||||| |||||||||||||
Sbjct: 741 accagctttgctctacacaaataaagcaacatcta 707
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>gb|AY104559.1| Zea mays PCO133879 mRNA sequence
          Length = 962

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 67/78 (85%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 270 agcaatcagtctcagctataaccatgtatacatg-cccctaccaaaatatttttcttatg 328
           |||||||||| || ||||||| | |||||||||| ||||||||||||   |||| |||||
Sbjct: 804 agcaatcagtatcggctataatcctgtatacatgccccctaccaaaaatctttttttatg 745

                             
Query: 329 taccagctttgctctaca 346
           |||  |||||||||||||
Sbjct: 744 tactcgctttgctctaca 727
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>gb|BT016292.1| Zea mays clone Contig125 mRNA sequence
          Length = 1106

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 307 ctaccaaaatatttttcttatgtaccagctttgctctaca 346
           ||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 896 ctaccaacatatttttcttatgtgctagctttgctctaca 857
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 332      cagctttgctctacacaaacaaag 355
                ||||||||||||||||||||||||
Sbjct: 12789892 cagctttgctctacacaaacaaag 12789915
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>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0086N11
          Length = 146185

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 332    cagctttgctctacacaaacaaag 355
              ||||||||||||||||||||||||
Sbjct: 138169 cagctttgctctacacaaacaaag 138192
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>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0073A18
          Length = 176755

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 332  cagctttgctctacacaaacaaag 355
            ||||||||||||||||||||||||
Sbjct: 9374 cagctttgctctacacaaacaaag 9397
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>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33
             Contains the 3' ends of genes FLJ34719 and KIAA0191,
             complete sequence
          Length = 127006

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 308   taccaaaatatttttcttatgt 329
             ||||||||||||||||||||||
Sbjct: 94767 taccaaaatatttttcttatgt 94788
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>emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chromosome 1p11.1-13.3,
             complete sequence
          Length = 100643

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 313   aaatatttttcttatgtaccag 334
             ||||||||||||||||||||||
Sbjct: 26796 aaatatttttcttatgtaccag 26817
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>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12
          Length = 253050

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 38    aagagaaaaatagtgcaagtgt 59
             ||||||||||||||||||||||
Sbjct: 61732 aagagaaaaatagtgcaagtgt 61711
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 386   tcaggacaatgaaatcagcatg 407
             ||||||||||||||||||||||
Sbjct: 27674 tcaggacaatgaaatcagcatg 27653
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>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete
            sequence
          Length = 179370

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 308  taccaaaatatttttcttatgt 329
            ||||||||||||||||||||||
Sbjct: 9681 taccaaaatatttttcttatgt 9660
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>gb|AY068187.1| Schmidtea mediterranea clone H.18.11b(T3) unknown mRNA sequence
          Length = 831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 65  aatcatcactcatcagcatct 85
           |||||||||||||||||||||
Sbjct: 457 aatcatcactcatcagcatct 437
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 343     tacacaaacaaagcaacatctata 366
               |||||||||||||||||| |||||
Sbjct: 1438573 tacacaaacaaagcaacaactata 1438596
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>ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0191 gene is
           expressed ubiquitously.~The KIAA0191 protein retains the
           C2H2 zinc-finger at its N-terminal region. (LOC456859),
           mRNA
          Length = 5007

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 985 ccaaaatatttttcttatgt 966
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>ref|NM_153585.3| Mus musculus CCR4-NOT transcription complex, subunit 10 (Cnot10),
            mRNA
          Length = 2854

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1387 aaaggcattgtacagtctat 1406
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>ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 2, mRNA
          Length = 5842

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 1, mRNA
          Length = 5845

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 3, mRNA
          Length = 5830

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
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>gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing 11, mRNA (cDNA clone
            IMAGE:5553553), partial cds
          Length = 2426

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
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>gb|BC025554.1| Mus musculus CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
            clone IMAGE:5321869), containing frame-shift errors
          Length = 2688

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1373 aaaggcattgtacagtctat 1392
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>gb|BC036179.1| Mus musculus CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
            clone MGC:37693 IMAGE:5059723), complete cds
          Length = 2430

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1484 aaaggcattgtacagtctat 1503
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>gb|BC036178.1| Mus musculus CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
           clone IMAGE:5011303), partial cds
          Length = 2236

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 aaaggcattgtacagtctat 229
           ||||||||||||||||||||
Sbjct: 968 aaaggcattgtacagtctat 987
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>ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
            containing 11 isoform b, transcript variant 1
            (LOC475349), mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1230 ccaaaatatttttcttatgt 1211
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>ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
           containing 11 isoform b, transcript variant 2
           (LOC475349), mRNA
          Length = 5206

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 613 ccaaaatatttttcttatgt 594
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>gb|AC121601.4| Mus musculus BAC clone RP23-305F2 from 1, complete sequence
          Length = 190653

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    catgcccctaccaaaatatt 319
              ||||||||||||||||||||
Sbjct: 156431 catgcccctaccaaaatatt 156412
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>ref|XM_761204.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0776) partial mRNA
          Length = 2460

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    ggtcaaaataattacttggt 21
            ||||||||||||||||||||
Sbjct: 1999 ggtcaaaataattacttggt 1980
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>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence
          Length = 106790

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    taattacttggttctcattc 29
             ||||||||||||||||||||
Sbjct: 12473 taattacttggttctcattc 12454
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>ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-dependent (PDE1A),
            transcript variant 1, mRNA
          Length = 2414

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  aggacaatgaaatcagcatg 407
            ||||||||||||||||||||
Sbjct: 1830 aggacaatgaaatcagcatg 1849
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>gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dependent, transcript
            variant 1, mRNA (cDNA clone MGC:26303 IMAGE:4814064),
            complete cds
          Length = 2322

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 388  aggacaatgaaatcagcatg 407
            ||||||||||||||||||||
Sbjct: 1881 aggacaatgaaatcagcatg 1900
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>emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clone DKFZp459G145)
          Length = 4003

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
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>dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein
          Length = 4710

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 797 ccaaaatatttttcttatgt 778
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>dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514
          Length = 2245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1263 ccaaaatatttttcttatgt 1244
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>dbj|AK149944.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530108J10 product:CCR4-NOT transcription
            complex, subunit 10, full insert sequence
          Length = 2247

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1345 aaaggcattgtacagtctat 1364
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>dbj|AK157824.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130064O10 product:CCR4-NOT
            transcription complex, subunit 10, full insert sequence
          Length = 4867

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1411 aaaggcattgtacagtctat 1430
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>ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA
          Length = 6054

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1549 ccaaaatatttttcttatgt 1530
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>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   aaaggcattgtacagtctat 229
             ||||||||||||||||||||
Sbjct: 77155 aaaggcattgtacagtctat 77136
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>dbj|AK029103.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732491N16 product:hypothetical TPR repeat
            containing protein, full insert sequence
          Length = 2854

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1387 aaaggcattgtacagtctat 1406
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>dbj|AK039464.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330046A16 product:hypothetical
            Tetratricopeptide repeat (TPR) structure containing
            protein, full insert sequence
          Length = 3467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1026 aaaggcattgtacagtctat 1045
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>dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330018P17 product:zinc finger, CCHC domain
           containing 11, full insert sequence
          Length = 1789

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 538 ccaaaatatttttcttatgt 519
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>dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030404K05 product:hypothetical
           Zn-finger, CCHC type/PAP/25A-associated domain/PAP/25A
           core domain/Zinc finger CCHC-type profile/Zn-finger,
           C2H2 type containing protein, full insert sequence
          Length = 3282

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 942 ccaaaatatttttcttatgt 923
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>dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630040F24 product:zinc finger, CCHC
            domain containing 11, full insert sequence
          Length = 1643

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  ccaaaatatttttcttatgt 329
            ||||||||||||||||||||
Sbjct: 1555 ccaaaatatttttcttatgt 1536
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>tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta protein (Dl) gene, complete
             cds
          Length = 38445

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   caggagcagcaaataaagca 273
             ||||||||||||||||||||
Sbjct: 30855 caggagcagcaaataaagca 30874
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>dbj|AK195804.1| Mus musculus cDNA, clone:Y1G0119K24, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000048268, based on BLAT search
          Length = 389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 aaaggcattgtacagtctat 229
           ||||||||||||||||||||
Sbjct: 132 aaaggcattgtacagtctat 151
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>emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 (from clone DKFZp686I05143)
          Length = 4319

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 650 ccaaaatatttttcttatgt 631
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>gb|AC156834.2| Mus musculus BAC clone RP24-129O14 from 9, complete sequence
          Length = 114471

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ttctgctgcagttactgcct 165
             ||||||||||||||||||||
Sbjct: 28730 ttctgctgcagttactgcct 28749
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>gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal scaffoldin precursor (cipV)
           gene, complete cds
          Length = 6555

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ctaccaaaatatttttctta 326
           ||||||||||||||||||||
Sbjct: 568 ctaccaaaatatttttctta 587
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>emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f16, COMPLETE SEQUENCE
          Length = 109924

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    gtggggtctatctcactcag 389
              ||||||||||||||||||||
Sbjct: 104766 gtggggtctatctcactcag 104747
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>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
             BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   caggagcagcaaataaagca 273
             ||||||||||||||||||||
Sbjct: 67242 caggagcagcaaataaagca 67223
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>gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63 of 118 of the complete
              sequence
          Length = 253323

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    caggagcagcaaataaagca 273
              ||||||||||||||||||||
Sbjct: 215967 caggagcagcaaataaagca 215948
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>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   gtggggtctatctcactcag 389
             ||||||||||||||||||||
Sbjct: 19611 gtggggtctatctcactcag 19592
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>emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on chromosome 13, complete
             sequence
          Length = 192967

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ttctacaacgcaagagaaaa 46
             ||||||||||||||||||||
Sbjct: 33180 ttctacaacgcaagagaaaa 33161
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>gb|BC039183.1| Mus musculus CCR4-NOT transcription complex, subunit 10, mRNA (cDNA
            clone MGC:27729 IMAGE:2631793), complete cds
          Length = 2783

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aaaggcattgtacagtctat 229
            ||||||||||||||||||||
Sbjct: 1486 aaaggcattgtacagtctat 1505
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>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete
              sequence
          Length = 232070

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ttccaatgccccaataacag 256
              ||||||||||||||||||||
Sbjct: 151293 ttccaatgccccaataacag 151312
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>dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds
          Length = 5203

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ccaaaatatttttcttatgt 329
           ||||||||||||||||||||
Sbjct: 618 ccaaaatatttttcttatgt 599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,000,567
Number of Sequences: 3902068
Number of extensions: 5000567
Number of successful extensions: 98170
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98011
Number of HSP's gapped (non-prelim): 157
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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