>ref|XM_450107.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3007

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 86/104 (82%), Gaps = 8/104 (7%)
 Strand = Plus / Minus

                                                                        
Query: 109  attacacccctgaatctgggaaagct---aaagaggtgacag--ggggagatctaaag-- 161
            |||||||||||||||| |||||||||   |||| || || ||  ||||||||||| ||  
Sbjct: 2884 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 2825

                                                        
Query: 162  -ttctttttcttatgtatggtacacaggaaaacgttacgatctt 204
             ||||| |||||||||||||||||||  | ||| ||||||||||
Sbjct: 2824 tttcttcttcttatgtatggtacacacaagaacattacgatctt 2781

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 86/104 (82%), Gaps = 8/104 (7%)
 Strand = Plus / Minus

                                                                           
Query: 109     attacacccctgaatctgggaaagct---aaagaggtgacaggg--ggagatctaaag-- 161
               |||||||||||||||| |||||||||   |||| || || ||||  ||||||||| ||  
Sbjct: 1732686 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 1732627

                                                           
Query: 162     -ttctttttcttatgtatggtacacaggaaaacgttacgatctt 204
                ||||| |||||||||||||||||||  | ||| ||||||||||
Sbjct: 1732626 tttcttcttcttatgtatggtacacacaagaacattacgatctt 1732583

>dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0415D04
          Length = 176627

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 86/104 (82%), Gaps = 8/104 (7%)
 Strand = Plus / Minus

                                                                          
Query: 109    attacacccctgaatctgggaaagct---aaagaggtgacaggg--ggagatctaaag-- 161
              |||||||||||||||| |||||||||   |||| || || ||||  ||||||||| ||  
Sbjct: 119258 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 119199

                                                          
Query: 162    -ttctttttcttatgtatggtacacaggaaaacgttacgatctt 204
               ||||| |||||||||||||||||||  | ||| ||||||||||
Sbjct: 119198 tttcttcttcttatgtatggtacacacaagaacattacgatctt 119155

>dbj|AK103665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135J15, full
            insert sequence
          Length = 3007

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 86/104 (82%), Gaps = 8/104 (7%)
 Strand = Plus / Minus

                                                                        
Query: 109  attacacccctgaatctgggaaagct---aaagaggtgacag--ggggagatctaaag-- 161
            |||||||||||||||| |||||||||   |||| || || ||  ||||||||||| ||  
Sbjct: 2884 attacacccctgaatcagggaaagcttttaaagtggggaaagggggggagatctacagtt 2825

                                                        
Query: 162  -ttctttttcttatgtatggtacacaggaaaacgttacgatctt 204
             ||||| |||||||||||||||||||  | ||| ||||||||||
Sbjct: 2824 tttcttcttcttatgtatggtacacacaagaacattacgatctt 2781

>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence
          Length = 127098

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 39    tgaataaaggaatatcaaaagg 60
             ||||||||||||||||||||||
Sbjct: 19379 tgaataaaggaatatcaaaagg 19358

>emb|AL034376.10|HS529N6 Human DNA sequence from clone RP4-529N6 on chromosome 6p24.1-25.3
             Contains a novel gene, complete sequence
          Length = 131819

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   taaagttctttttcttatgta 177
             |||||||||||||||||||||
Sbjct: 95137 taaagttctttttcttatgta 95157

>gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4, complete sequence
          Length = 181850

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 30    tttctttcctgaataaaggaatatcaaaa 58
             ||||||| |||||||||||||| ||||||
Sbjct: 67364 tttctttactgaataaaggaatttcaaaa 67392

>gb|AC015801.25|AC015801 Homo sapiens chromosome 17, clone RP11-854A13, complete sequence
          Length = 185351

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 133   ctaaagaggtgacagggggagatct 157
             ||||||||||||||||| |||||||
Sbjct: 92548 ctaaagaggtgacagggagagatct 92524

>dbj|AK174886.1| Ciona intestinalis cDNA, clone:citb030d06, full insert sequence
          Length = 576

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 162 ttctttttcttatgtatggta 182
           |||||||||||||||||||||
Sbjct: 397 ttctttttcttatgtatggta 417

>gb|AC153899.3| Mus musculus  BAC RP23-128C4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 164582

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttttgcacattttctttcct 39
              ||||||||||||||||||||
Sbjct: 140863 ttttgcacattttctttcct 140882

>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence
          Length = 189241

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atgccttttgcacattttct 34
              ||||||||||||||||||||
Sbjct: 175955 atgccttttgcacattttct 175936

>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence
          Length = 194413

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     atgccttttgcacattttct 34
              ||||||||||||||||||||
Sbjct: 129583 atgccttttgcacattttct 129602

>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence
          Length = 170041

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    gttctttttcttatgtatgg 180
              ||||||||||||||||||||
Sbjct: 148277 gttctttttcttatgtatgg 148258

>emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chromosome 6p22.1-23
             Contains the gene for an ssDNA binding protein and a CpG
             island, complete sequence
          Length = 150520

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    cttttgcacattttctttcctgaa 42
             |||||||||||||| |||||||||
Sbjct: 47922 cttttgcacattttttttcctgaa 47899

>emb|AL008583.1|HS327J16 Human DNA sequence from clone RP3-327J16 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 111746

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ccttctaaattctgatgcct 20
             ||||||||||||||||||||
Sbjct: 25399 ccttctaaattctgatgcct 25418

>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence
          Length = 203628

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   gttctttttcttatgtatgg 180
             ||||||||||||||||||||
Sbjct: 18810 gttctttttcttatgtatgg 18829

>gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome 13, complete sequence
          Length = 204778

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    tcaaaaggtatcatcatttc 72
             ||||||||||||||||||||
Sbjct: 33656 tcaaaaggtatcatcatttc 33675

>ref|NM_001013527.1| Danio rerio zgc:103605 (zgc:103605), mRNA
          Length = 2001

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   ccttttgcacattttctttc 37
            ||||||||||||||||||||
Sbjct: 1596 ccttttgcacattttctttc 1615

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      aattacacccctgaatctgg 127
                ||||||||||||||||||||
Sbjct: 20897954 aattacacccctgaatctgg 20897973

>gb|BC090903.1| Danio rerio zgc:103605, mRNA (cDNA clone MGC:103605 IMAGE:7250553),
            complete cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   ccttttgcacattttctttc 37
            ||||||||||||||||||||
Sbjct: 1596 ccttttgcacattttctttc 1615

>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101075

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   aattacacccctgaatctgg 127
             ||||||||||||||||||||
Sbjct: 99681 aattacacccctgaatctgg 99700

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
            insert sequence
          Length = 2509

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  aattacacccctgaatctgg 127
            ||||||||||||||||||||
Sbjct: 1719 aattacacccctgaatctgg 1738

>dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030L10, full
            insert sequence
          Length = 1829

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  aattacacccctgaatctgg 127
            ||||||||||||||||||||
Sbjct: 998  aattacacccctgaatctgg 1017

>dbj|AP000919.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-737O24, complete
              sequence
          Length = 184440

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aataaaggaatatcaaaagg 60
              ||||||||||||||||||||
Sbjct: 123593 aataaaggaatatcaaaagg 123612

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      aattacacccctgaatctgg 127
                ||||||||||||||||||||
Sbjct: 20824168 aattacacccctgaatctgg 20824187

>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aattacacccctgaatctgg 127
             ||||||||||||||||||||
Sbjct: 61041 aattacacccctgaatctgg 61022

>emb|AL845316.3| Mouse DNA sequence from clone RP23-348I7 on chromosome X, complete
             sequence
          Length = 197688

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   agttctttttcttatgtatg 179
             ||||||||||||||||||||
Sbjct: 53722 agttctttttcttatgtatg 53703

>dbj|AB034225.1| Flavobacterium aquatile gyrB gene for DNA gyrase B subunit, partial
           cds
          Length = 1422

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  tctttcctgaataaaggaat 51
           ||||||||||||||||||||
Sbjct: 271 tctttcctgaataaaggaat 290


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,093,130
Number of Sequences: 3902068
Number of extensions: 3093130
Number of successful extensions: 54889
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54789
Number of HSP's gapped (non-prelim): 100
length of query: 241
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 219
effective length of database: 17,147,199,772
effective search space: 3755236750068
effective search space used: 3755236750068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)