>COS10_YEAST (P52924) Protein COS10|
          Length = 374

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 69 CLNDTVFRRRLIWLCSNV 16
          CL + +FR RL WLCS +
Sbjct: 20 CLPEDIFRNRLTWLCSEI 37

>Y2234_ARCFU (O28049) Hypothetical protein AF2234|
          Length = 67

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 330 TRFQHFGTAEQQNDSVGFICPTCK 259
           T F +FGT+E   D  G +CP CK
Sbjct: 27  TGFCYFGTSEVIKDEKGCLCPLCK 50

>MATK_CHAGL (Q8MA04) Maturase K (Intron maturase)|
          Length = 508

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = -1

Query: 195 DAVFIICSLIFFFFTRGSCRVDWNQG*QILVCVRWLR*PVWLCLNDTVFRRRLIWLCSNV 16
           D +F +  L+FFF+T+   R+   +       V +++    +C+N  + +  +I+L  N 
Sbjct: 330 DQIFFLGFLVFFFYTKIQIRIKLKK-----CLVNFIKLEKKICINVPI-KLLIIFLSKNG 383

Query: 15  MCDI 4
            CDI
Sbjct: 384 FCDI 387

>OPGG_DICD3 (Q9F496) Glucans biosynthesis protein G precursor|
          Length = 522

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 409 ELPSGPVRLGPVQDGWRAPIRMCVVQHKVP 320
           E+    VR  PV  GWR  +RM V  +K P
Sbjct: 467 EIVENSVRYNPVTHGWRLTLRMKVKDNKQP 496

>RF1_METCA (Q60A21) Peptide chain release factor 1 (RF-1)|
          Length = 360

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = +1

Query: 232 YAKMTGCLVLARGANEANRVILLLGSAKMLEPCVA------PHTYGLEHANHLGQVP 384
           + ++TG L      N+ NR   L      LEPCVA          GL+HA  L Q P
Sbjct: 16  FEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLEGLDHAQALLQDP 72

>NUDT6_HUMAN (P53370) Nucleoside diphosphate-linked moiety X motif 6 (Nudix|
           motif 6) (Protein GFG) (GFG-1) (Antisense basic
           fibroblast growth factor)
          Length = 316

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 283 WLHLPHVQGQDIQSSSHTQQWFIALAFDL*CCFHHM*SDFFLLHAGIM*G--RLEPGLAN 110
           WLH+P +Q +           FIA A  L  CFHH  SD   L   +  G  RL PG A+
Sbjct: 94  WLHIPILQSR-----------FIAPAASLGFCFHHAESDSSTLTLWLREGPSRL-PGYAS 141

Query: 109 SSV 101
             V
Sbjct: 142 HQV 144

>SYD_HELHP (Q7VF76) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 581

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
 Frame = -1

Query: 366 VGVLQSVCVWCNTRFQHFGTA-EQQNDSVGFICPTCKDKTSSH 241
           +G    VC WCNT   H G       D  G +   C   T +H
Sbjct: 15  IGTEVQVCGWCNTYRDHGGVVFIDLRDKSGIVQLVCDPSTQAH 57

>ANFY1_MOUSE (Q810B6) Ankyrin repeat and FYVE domain-containing protein 1|
           (Ankyrin repeats hooked to a zinc finger motif)
          Length = 1169

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +1

Query: 166 NQTTYDENSIRDRMLKR*TIVEYAK-MTGCLVLARGANEANRVILLLGSAKMLEPCVAPH 342
           N T++DENS+  R+++R +  +    MTG  +L R A   N    L          +A  
Sbjct: 430 NGTSFDENSLAARLIQRGSNTDAPDVMTGNCLLQRAAGAGNEAAALF---------LATS 480

Query: 343 TYGLEHANHLGQVP 384
                H N  G+ P
Sbjct: 481 GAHANHRNKWGETP 494

>VE7_HPVME (P27963) Protein E7|
          Length = 110

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
 Frame = -1

Query: 357 LQSVCVWCNTRFQHFGTAEQQN---------DSVGFICPTCKDKT 250
           +Q  C  CN   Q    A ++N         DS+ F+CP C  +T
Sbjct: 65  IQCTCCKCNNLLQLVVEASRENLRNVELLFMDSLNFVCPWCATET 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,164,605
Number of Sequences: 219361
Number of extensions: 1309807
Number of successful extensions: 3027
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3026
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)