>gb|AC051642.5| Homo sapiens chromosome 8, clone RP11-583M2, complete sequence
          Length = 174445

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 113   atatgtgttatcaattttacata 135
             |||||||||||||||||||||||
Sbjct: 70850 atatgtgttatcaattttacata 70872

>ref|XM_649138.1| Entamoeba histolytica HM-1:IMSS nucleolar protein Nop56, putative
           (59.t00019) partial mRNA
          Length = 1362

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 300 cttcattccaagatatcaacaattgcagctaat 332
           ||||||||||||||  ||||||||||| |||||
Sbjct: 835 cttcattccaagatgacaacaattgcacctaat 867

>emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chromosome 13, complete
             sequence
          Length = 186266

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   aaaagattcaggatggccaga 278
             |||||||||||||||||||||
Sbjct: 75687 aaaagattcaggatggccaga 75707

>gb|AC021539.10| Homo sapiens chromosome 4, clone RP11-460H9, complete sequence
          Length = 191158

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 215  cactgttaatgtcaacatgca 235
            |||||||||||||||||||||
Sbjct: 5982 cactgttaatgtcaacatgca 5962

>gb|AC096590.4| Homo sapiens BAC clone RP11-751A18 from 4, complete sequence
          Length = 182559

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   cactgttaatgtcaacatgca 235
             |||||||||||||||||||||
Sbjct: 98307 cactgttaatgtcaacatgca 98287

>gb|AC008600.7| Homo sapiens chromosome 5 clone CTB-105J5, complete sequence
          Length = 147114

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   cactgttaatgtcaacatgca 235
             |||||||||||||||||||||
Sbjct: 73874 cactgttaatgtcaacatgca 73854

>gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete sequence
          Length = 210128

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 185    cacttcttctccacttacaacacaaaagc 213
              |||||||||| ||||| ||||||||||||
Sbjct: 127584 cacttcttctacacttgcaacacaaaagc 127612

>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 4      aaggaaagaaaaactagcaacata 27
              ||||||| ||||||||||||||||
Sbjct: 123204 aaggaaaaaaaaactagcaacata 123227

>emb|AL049646.19|HSDJ568F9 Human DNA sequence from clone RP4-568F9 on chromosome 20 Contains the
              ZNF133 gene for zinc finger protein 133, three novel genes,
              the 3' end of the C20orf12 gene for chromosome 20 open
              reading frame 12 and two CpG islands, complete sequence
          Length = 155432

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    cttacaacacaaaagcccac 217
              ||||||||||||||||||||
Sbjct: 118908 cttacaacacaaaagcccac 118927

>gb|AC184690.1| Pan troglodytes chromosome X clone CH251-483P23 map human ortholog
             p11.4, complete sequence
          Length = 192593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tggccagaacacagtgccca 290
             ||||||||||||||||||||
Sbjct: 57753 tggccagaacacagtgccca 57734

>gb|AC168052.2| Pan troglodytes chromosome X clone PTB-031C19 map human ortholog p11.4,
              complete sequence
          Length = 144722

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tggccagaacacagtgccca 290
              ||||||||||||||||||||
Sbjct: 110817 tggccagaacacagtgccca 110798

>gb|AC024145.34| Homo sapiens 12 BAC RP11-513G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 75771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ttcacttcttctccacttac 202
             ||||||||||||||||||||
Sbjct: 14249 ttcacttcttctccacttac 14230

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 179      ccatttcacttcttctccacttacaaca 206
                ||||||||||| ||||||||||| ||||
Sbjct: 11867226 ccatttcacttgttctccacttaaaaca 11867253

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 4       aaggaaagaaaaactagcaacata 27
               ||||||| ||||||||||||||||
Sbjct: 2676684 aaggaaaaaaaaactagcaacata 2676707

>gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 218476

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    gcttcattccaagatatcaa 318
              ||||||||||||||||||||
Sbjct: 157576 gcttcattccaagatatcaa 157557

>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1705_A03
          Length = 168689

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 179    ccatttcacttcttctccacttacaaca 206
              ||||||||||| ||||||||||| ||||
Sbjct: 145511 ccatttcacttgttctccacttaaaaca 145538

>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1212_C09
          Length = 120818

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 179   ccatttcacttcttctccacttacaaca 206
             ||||||||||| ||||||||||| ||||
Sbjct: 16371 ccatttcacttgttctccacttaaaaca 16398


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,263,262
Number of Sequences: 3902068
Number of extensions: 4263262
Number of successful extensions: 95180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95085
Number of HSP's gapped (non-prelim): 95
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)