ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 i... 46 0.11
2gb|AC156357.3| Carollia perspicillata clone 84E8, complete sequence 46 0.11
3gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence 46 0.11
4gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 46 0.11
5emb|X59849.1|MMLFIOR Mouse plasmid LFI gene for large T antigen,... 44 0.42
6ref|NM_001026384.1| Caenorhabditis elegans K07A12.4a (K07A12.4) ... 44 0.42
7ref|NM_001026385.1| Caenorhabditis elegans K07A12.4b (K07A12.4) ... 44 0.42
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
9dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
10dbj|AK069401.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
11emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, comp... 44 0.42
12gb|M15794.1|MUSLFI Mouse L cell L factor plasmid type I (LF-I), ... 44 0.42
13gb|AC140398.2| Mus musculus BAC clone RP23-162P5 from chromosome... 42 1.6
14gb|AC121955.2| Mus musculus BAC clone RP24-223N5 from 5, complet... 42 1.6
15gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 42 1.6
16emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 42 1.6
17emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in ... 42 1.6
18emb|AL974309.17| Zebrafish DNA sequence from clone DKEY-29D5 in ... 42 1.6
19gb|AC026419.5| Homo sapiens chromosome 5 clone CTD-2113H21, comp... 42 1.6
20emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 i... 42 1.6
21emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in ... 42 1.6
22ref|XM_464581.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
23gb|AC008225.4| Drosophila melanogaster clone BACR03E11, complete... 40 6.5
24gb|AC095016.2| Drosophila melanogaster clone BACR03K19, complete... 40 6.5
25ref|NM_145150.1| Mus musculus protein regulator of cytokinesis 1... 40 6.5
26gb|BC059808.1| Mus musculus protein regulator of cytokinesis 1, ... 40 6.5
27gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome... 40 6.5
28ref|XM_647169.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.5
29gb|AC101718.6| Mus musculus chromosome 18, clone RP23-292N8, com... 40 6.5
30gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, co... 40 6.5
31emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
32emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in... 40 6.5
33gb|BC005475.1| Mus musculus protein regulator of cytokinesis 1, ... 40 6.5
34dbj|AK135778.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.5
35gb|AC104988.4| Homo sapiens chromosome 18, clone RP11-732E23, co... 40 6.5
36dbj|AK088576.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.5
37dbj|AK029140.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 6.5
38gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O... 40 6.5
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
41gb|AC078881.5| Homo sapiens BAC clone RP11-130F10 from 4, comple... 40 6.5
42gb|AC138315.2| Homo sapiens 3 BAC RP11-163K7 (Roswell Park Cance... 40 6.5
43dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
44dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
45dbj|AK120550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
46dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
47gb|AC149381.2| Phakopsora pachyrhizi clone JGIAFNA-5A7, complete... 40 6.5
48gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 40 6.5
49gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12... 40 6.5
50emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in ... 40 6.5
51dbj|AK114234.1| Ciona intestinalis cDNA, clone:cicl047p05, full ... 40 6.5
52emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on ch... 40 6.5
53gb|AC148328.3| Mus musculus BAC clone RP24-329C11 from 9, comple... 40 6.5
54gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, comple... 40 6.5
55dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss... 40 6.5
56emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chr... 40 6.5
57gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p... 40 6.5
58gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p... 40 6.5
59dbj|AB061831.1| Homo sapiens RPL32 gene for ribosomal protein L3... 40 6.5

>emb|CR391966.8| Zebrafish DNA sequence from clone CH211-269M15 in linkage group 8,
             complete sequence
          Length = 105854

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 90    tcctcttgcaaaatcattctaat 112
             |||||||||||||||||||||||
Sbjct: 98870 tcctcttgcaaaatcattctaat 98848



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>gb|AC156357.3| Carollia perspicillata clone 84E8, complete sequence
          Length = 64472

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 109   taatatgtatacaatcaacaaat 131
             |||||||||||||||||||||||
Sbjct: 16761 taatatgtatacaatcaacaaat 16739



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>gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence
          Length = 123894

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 109    taatatgtatacaatcaacaaat 131
              |||||||||||||||||||||||
Sbjct: 120874 taatatgtatacaatcaacaaat 120852



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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 109    taatatgtatacaatcaacaaat 131
              |||||||||||||||||||||||
Sbjct: 120874 taatatgtatacaatcaacaaat 120852



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>emb|X59849.1|MMLFIOR Mouse plasmid LFI gene for large T antigen, middle T antigen and
            small T antigen
          Length = 5290

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 81   ctgccctcttcctcttgcaaaa 102
            ||||||||||||||||||||||
Sbjct: 5191 ctgccctcttcctcttgcaaaa 5170



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>ref|NM_001026384.1| Caenorhabditis elegans K07A12.4a (K07A12.4) mRNA, complete cds
          Length = 1881

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 114  tgtatacaatcaacaaatcaaa 135
            ||||||||||||||||||||||
Sbjct: 1670 tgtatacaatcaacaaatcaaa 1691



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>ref|NM_001026385.1| Caenorhabditis elegans K07A12.4b (K07A12.4) mRNA, complete cds
          Length = 1937

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 114  tgtatacaatcaacaaatcaaa 135
            ||||||||||||||||||||||
Sbjct: 1616 tgtatacaatcaacaaatcaaa 1637



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 1       gtttgtttcaacaaaagaatcactca 26
               ||||||| ||||||||||||||||||
Sbjct: 9474121 gtttgttacaacaaaagaatcactca 9474096



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 118     tacaatcaacaaatcaaacaaatca 142
               ||||||||||| |||||||||||||
Sbjct: 9474009 tacaatcaacacatcaaacaaatca 9473985



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>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0424A08
          Length = 151294

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1    gtttgtttcaacaaaagaatcactca 26
            ||||||| ||||||||||||||||||
Sbjct: 7550 gtttgttacaacaaaagaatcactca 7525



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 118  tacaatcaacaaatcaaacaaatca 142
            ||||||||||| |||||||||||||
Sbjct: 7438 tacaatcaacacatcaaacaaatca 7414



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>dbj|AK069401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014J19, full
            insert sequence
          Length = 1531

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1    gtttgtttcaacaaaagaatcactca 26
            ||||||| ||||||||||||||||||
Sbjct: 1489 gtttgttacaacaaaagaatcactca 1464



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 118  tacaatcaacaaatcaaacaaatca 142
            ||||||||||| |||||||||||||
Sbjct: 1377 tacaatcaacacatcaaacaaatca 1353



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>emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, complete sequence
          Length = 29106

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 114   tgtatacaatcaacaaatcaaa 135
             ||||||||||||||||||||||
Sbjct: 22563 tgtatacaatcaacaaatcaaa 22542



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>gb|M15794.1|MUSLFI Mouse L cell L factor plasmid type I (LF-I), covalently closed
           circular DNA
          Length = 281

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 81  ctgccctcttcctcttgcaaaa 102
           ||||||||||||||||||||||
Sbjct: 175 ctgccctcttcctcttgcaaaa 154



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>gb|AC140398.2| Mus musculus BAC clone RP23-162P5 from chromosome 5, complete sequence
          Length = 200640

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     ctctctgccctcttcctcttg 97
              |||||||||||||||||||||
Sbjct: 141592 ctctctgccctcttcctcttg 141572



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>gb|AC121955.2| Mus musculus BAC clone RP24-223N5 from 5, complete sequence
          Length = 153819

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     ctctctgccctcttcctcttg 97
              |||||||||||||||||||||
Sbjct: 144236 ctctctgccctcttcctcttg 144256



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>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 208   aaactatgcacaacatcagatacatatgc 236
             |||||||||||| ||||||||||||||||
Sbjct: 64090 aaactatgcaca-catcagatacatatgc 64063



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>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    cttcaacaaactatgcacaac 221
              |||||||||||||||||||||
Sbjct: 684989 cttcaacaaactatgcacaac 685009



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>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5,
             complete sequence
          Length = 156095

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    ctctgccctcttcctcttgca 99
             |||||||||||||||||||||
Sbjct: 40367 ctctgccctcttcctcttgca 40347



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>emb|AL974309.17| Zebrafish DNA sequence from clone DKEY-29D5 in linkage group 1,
             complete sequence
          Length = 214332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 117   atacaatcaacaaatcaaacaaatc 141
             |||||||| ||||||||||||||||
Sbjct: 77624 atacaatctacaaatcaaacaaatc 77648



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>gb|AC026419.5| Homo sapiens chromosome 5 clone CTD-2113H21, complete sequence
          Length = 94588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   caatcaacaaatcaaacaaat 140
             |||||||||||||||||||||
Sbjct: 61856 caatcaacaaatcaaacaaat 61836



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>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1,
             complete sequence
          Length = 196931

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   aatcaacaaatcaaacaaatc 141
             |||||||||||||||||||||
Sbjct: 23483 aatcaacaaatcaaacaaatc 23463



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>emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in linkage group 1,
             complete sequence
          Length = 184212

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 117   atacaatcaacaaatcaaacaaatc 141
             |||||||| ||||||||||||||||
Sbjct: 20349 atacaatctacaaatcaaacaaatc 20325



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>ref|XM_464581.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3068

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 109  taatatgtatacaatcaacaaatc 132
            ||||||||| ||||||||||||||
Sbjct: 2842 taatatgtaaacaatcaacaaatc 2819



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>gb|AC008225.4| Drosophila melanogaster clone BACR03E11, complete sequence
          Length = 174123

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tcaacaaactatgcacaaca 222
             ||||||||||||||||||||
Sbjct: 87814 tcaacaaactatgcacaaca 87795



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>gb|AC095016.2| Drosophila melanogaster clone BACR03K19, complete sequence
          Length = 165743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  tcaacaaactatgcacaaca 222
            ||||||||||||||||||||
Sbjct: 6581 tcaacaaactatgcacaaca 6562



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>ref|NM_145150.1| Mus musculus protein regulator of cytokinesis 1 (Prc1), mRNA
          Length = 2978

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 748 tttcatttccagctgcttca 729



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>gb|BC059808.1| Mus musculus protein regulator of cytokinesis 1, mRNA (cDNA clone
           IMAGE:6813094), partial cds
          Length = 2994

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 759 tttcatttccagctgcttca 740



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>gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome 12, complete sequence
          Length = 179330

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ctctctgccctcttcctctt 96
              ||||||||||||||||||||
Sbjct: 152529 ctctctgccctcttcctctt 152548



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>ref|XM_647169.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (125.t00016)
           partial mRNA
          Length = 2616

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tcaacaaatcaaacaaatca 142
           ||||||||||||||||||||
Sbjct: 367 tcaacaaatcaaacaaatca 386



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>gb|AC101718.6| Mus musculus chromosome 18, clone RP23-292N8, complete sequence
          Length = 175366

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   aaactatgcacaacatcaga 227
             ||||||||||||||||||||
Sbjct: 36363 aaactatgcacaacatcaga 36344



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>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence
          Length = 209678

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    aaactatgcacaacatcaga 227
              ||||||||||||||||||||
Sbjct: 166952 aaactatgcacaacatcaga 166933



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>emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0067G11,
             complete sequence
          Length = 156983

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ctctgccctcttcctcttgc 98
             ||||||||||||||||||||
Sbjct: 84934 ctctgccctcttcctcttgc 84915



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>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13,
              complete sequence
          Length = 219709

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 233    atgcacatcttctttacatgaaaa 256
              ||||||||||| ||||||||||||
Sbjct: 193745 atgcacatcttttttacatgaaaa 193722



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>gb|BC005475.1| Mus musculus protein regulator of cytokinesis 1, mRNA (cDNA clone
           MGC:6745 IMAGE:3592138), complete cds
          Length = 2978

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 748 tttcatttccagctgcttca 729



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>dbj|AK135778.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420415I15 product:protein
           regulator of cytokinesis 1, full insert sequence
          Length = 2566

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 439 tttcatttccagctgcttca 420



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>gb|AC104988.4| Homo sapiens chromosome 18, clone RP11-732E23, complete sequence
          Length = 171501

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tatacaatcaacaaatcaaa 135
             ||||||||||||||||||||
Sbjct: 55748 tatacaatcaacaaatcaaa 55767



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>dbj|AK088576.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430020K16
           product:protein regulator of cytokinesis 1, full insert
           sequence
          Length = 2912

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 786 tttcatttccagctgcttca 767



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>dbj|AK029140.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732496M17 product:protein regulator of
           cytokinesis 1, full insert sequence
          Length = 3144

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tttcatttccagctgcttca 205
           ||||||||||||||||||||
Sbjct: 801 tttcatttccagctgcttca 782



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>gb|AC018843.4|AC018843 Homo sapiens chromosome 3 clone RP11-900O22 map 3p, complete sequence
          Length = 211012

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    ggaaacttggcaggcagaga 327
              ||||||||||||||||||||
Sbjct: 185868 ggaaacttggcaggcagaga 185887



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 79       ctctgccctcttcctcttgc 98
                ||||||||||||||||||||
Sbjct: 11323744 ctctgccctcttcctcttgc 11323725



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 109     taatatgtatacaatcaacaaatc 132
               ||||||||| ||||||||||||||
Sbjct: 6115163 taatatgtaaacaatcaacaaatc 6115140



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>gb|AC078881.5| Homo sapiens BAC clone RP11-130F10 from 4, complete sequence
          Length = 171068

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gtatttacagtgttcctctg 178
              ||||||||||||||||||||
Sbjct: 140401 gtatttacagtgttcctctg 140382



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>gb|AC138315.2| Homo sapiens 3 BAC RP11-163K7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   gtcaatcatttagcatgaag 463
             ||||||||||||||||||||
Sbjct: 11960 gtcaatcatttagcatgaag 11941



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>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   taatatgtatacaatcaacaaatc 132
             ||||||||| ||||||||||||||
Sbjct: 80645 taatatgtaaacaatcaacaaatc 80622



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>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1003_F05
          Length = 147472

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    taatatgtatacaatcaacaaatc 132
              ||||||||| ||||||||||||||
Sbjct: 136002 taatatgtaaacaatcaacaaatc 135979



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>dbj|AK120550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B09, full
           insert sequence
          Length = 6305

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  ctctgccctcttcctcttgc 98
           ||||||||||||||||||||
Sbjct: 263 ctctgccctcttcctcttgc 282



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>dbj|AK066171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F05, full
            insert sequence
          Length = 3068

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 109  taatatgtatacaatcaacaaatc 132
            ||||||||| ||||||||||||||
Sbjct: 2842 taatatgtaaacaatcaacaaatc 2819



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>gb|AC149381.2| Phakopsora pachyrhizi clone JGIAFNA-5A7, complete sequence
          Length = 35166

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 119  acaatcaacaaatcaaacaaatca 142
            |||||||||||||||| |||||||
Sbjct: 3392 acaatcaacaaatcaagcaaatca 3415



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>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 93   tcttgcaaaatcattctaatatgt 116
            ||||| ||||||||||||||||||
Sbjct: 4646 tcttgaaaaatcattctaatatgt 4669



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>gb|AE003672.4| Drosophila melanogaster chromosome 3R, section 12 of 118 of the
             complete sequence
          Length = 301379

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   tcaacaaactatgcacaaca 222
             ||||||||||||||||||||
Sbjct: 38825 tcaacaaactatgcacaaca 38844



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>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8, complete
              sequence
          Length = 217745

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    aaatcattctaatatgtata 119
              ||||||||||||||||||||
Sbjct: 210348 aaatcattctaatatgtata 210329



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>dbj|AK114234.1| Ciona intestinalis cDNA, clone:cicl047p05, full insert sequence
          Length = 1912

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 208 aaactatgcacaacatcaga 227
           ||||||||||||||||||||
Sbjct: 922 aaactatgcacaacatcaga 941



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>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete
              sequence
          Length = 199060

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     ctctctgccctcttcctctt 96
              ||||||||||||||||||||
Sbjct: 142272 ctctctgccctcttcctctt 142253



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>gb|AC148328.3| Mus musculus BAC clone RP24-329C11 from 9, complete sequence
          Length = 167164

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ctctctgccctcttcctctt 96
              ||||||||||||||||||||
Sbjct: 118605 ctctctgccctcttcctctt 118624



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>gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, complete sequence
          Length = 218248

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    ctctctgccctcttcctctt 96
             ||||||||||||||||||||
Sbjct: 17472 ctctctgccctcttcctctt 17491



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>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     atttggtccagttttacata 45
              ||||||||||||||||||||
Sbjct: 501492 atttggtccagttttacata 501473



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>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete
              sequence
          Length = 166025

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      ttcaacaaaagaatcactcatttg 30
              ||||||||||| ||||||||||||
Sbjct: 109843 ttcaacaaaagcatcactcatttg 109866



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>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence
          Length = 169005

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ggaaacttggcaggcagaga 327
             ||||||||||||||||||||
Sbjct: 42839 ggaaacttggcaggcagaga 42858



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>gb|AC018836.5| Homo sapiens chromosome 3 clone RP11-588P9 map 3p, complete sequence
          Length = 184716

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    ggaaacttggcaggcagaga 327
              ||||||||||||||||||||
Sbjct: 121481 ggaaacttggcaggcagaga 121500



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>dbj|AB061831.1| Homo sapiens RPL32 gene for ribosomal protein L32, complete cds and
            sequence
          Length = 7539

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  ggaaacttggcaggcagaga 327
            ||||||||||||||||||||
Sbjct: 4005 ggaaacttggcaggcagaga 4024


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,605,866
Number of Sequences: 3902068
Number of extensions: 5605866
Number of successful extensions: 106923
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 106734
Number of HSP's gapped (non-prelim): 190
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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