>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 34      gaaggggaaagcaaatacaaaaggg 58
               ||||| |||||||||||||||||||
Sbjct: 2192856 gaaggcgaaagcaaatacaaaaggg 2192880

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 34      gaaggggaaagcaaatacaaaaggg 58
               ||||| |||||||||||||||||||
Sbjct: 2192800 gaaggcgaaagcaaatacaaaaggg 2192824

>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132703

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 34    gaaggggaaagcaaatacaaaaggg 58
             ||||| |||||||||||||||||||
Sbjct: 75080 gaaggcgaaagcaaatacaaaaggg 75104

>gb|AC123923.2| Mus musculus BAC clone RP24-228I17 from chromosome 1, complete sequence
          Length = 163182

 Score = 40.1 bits (20), Expect = 0.74
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tattaaaatatgaaggggaa 42
             ||||||||||||||||||||
Sbjct: 88488 tattaaaatatgaaggggaa 88507

>emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chromosome 6, complete
             sequence
          Length = 149849

 Score = 40.1 bits (20), Expect = 0.74
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    catctttttattaaaatatg 34
             ||||||||||||||||||||
Sbjct: 86021 catctttttattaaaatatg 86040

>emb|BX649631.8| Zebrafish DNA sequence from clone CH211-186M12 in linkage group 22,
             complete sequence
          Length = 168355

 Score = 40.1 bits (20), Expect = 0.74
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ccatctttttattaaaatat 33
             ||||||||||||||||||||
Sbjct: 14712 ccatctttttattaaaatat 14731

>gb|AC157520.2| Mus musculus BAC clone RP23-229N21 from 6, complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 0.74
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 21    tttattaaaatatgaaggggaaagcaaa 48
             ||||||||||| ||||||||||| ||||
Sbjct: 94522 tttattaaaatttgaaggggaaaacaaa 94549

>gb|AC005255.1|AC005255 Homo sapiens chromosome 19, CIT-HSP-146e8, complete sequence
          Length = 94343

 Score = 40.1 bits (20), Expect = 0.74
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    catctttttattaaaatatgaagg 38
             ||||||||||| ||||||||||||
Sbjct: 46219 catctttttatgaaaatatgaagg 46196

>emb|Z35637.1|CEC03C10 Caenorhabditis elegans Cosmid C03C10, complete sequence
          Length = 31418

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 24   attaaaatatgaaggggaa 42
            |||||||||||||||||||
Sbjct: 6762 attaaaatatgaaggggaa 6744

>gb|AC121924.3| Mus musculus BAC clone RP24-198P16 from chromosome 2, complete sequence
          Length = 177062

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     ccatctttttattaaaatatgaa 36
              ||||||||| |||||||||||||
Sbjct: 121691 ccatcttttaattaaaatatgaa 121713

>ref|XM_649005.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (63.t00027)
           partial mRNA
          Length = 507

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 15  catctttttattaaaatatgaag 37
           |||| ||||||||||||||||||
Sbjct: 204 catcattttattaaaatatgaag 182

>ref|XM_652038.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (4.t00085)
            partial mRNA
          Length = 2685

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 10   aaacccatctttttattaa 28
            |||||||||||||||||||
Sbjct: 1781 aaacccatctttttattaa 1799

>emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006
          Length = 340000

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     aaaacccatctttttatta 27
             |||||||||||||||||||
Sbjct: 19425 aaaacccatctttttatta 19407

>emb|AL390783.12| Human DNA sequence from clone RP11-109I13 on chromosome 10 Contains part
              of the CACNB2 gene for calcium channel voltage-dependent
              beta 2 subunit and a novel gene, complete sequence
          Length = 177656

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     aggggaaagcaaatacaaa 54
              |||||||||||||||||||
Sbjct: 161970 aggggaaagcaaatacaaa 161988

>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     catctttttattaaaatat 33
              |||||||||||||||||||
Sbjct: 170912 catctttttattaaaatat 170930

>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 118312

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     caaaacccatctttttatt 26
             |||||||||||||||||||
Sbjct: 61811 caaaacccatctttttatt 61793

>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 19      tttttattaaaatatgaag 37
               |||||||||||||||||||
Sbjct: 1255470 tttttattaaaatatgaag 1255488

>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9,
             complete sequence
          Length = 176022

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    ctttttattaaaatatgaa 36
             |||||||||||||||||||
Sbjct: 32673 ctttttattaaaatatgaa 32691

>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE
          Length = 124859

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     tccatcaaaacccatcttt 21
             |||||||||||||||||||
Sbjct: 71946 tccatcaaaacccatcttt 71964

>emb|AJ635260.1| Phodaga marmorata 5.8S rRNA gene (partial), ITS2 and 28S rRNA gene
           (partial), isolate Pma#1
          Length = 707

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  catctttttattaaaatat 33
           |||||||||||||||||||
Sbjct: 181 catctttttattaaaatat 163

>gb|AC156991.9| Mus musculus chromosome 8, clone RP23-297F23, complete sequence
          Length = 164343

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 15   catctttttattaaaatat 33
            |||||||||||||||||||
Sbjct: 6960 catctttttattaaaatat 6978

>emb|BX537453.3|RN86L3 Rattus norvegicus chromosome 1 BAC RP32-86L3, complete sequence
          Length = 154099

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    atctttttattaaaatatgaagg 38
             ||||||| |||||||||||||||
Sbjct: 45309 atcttttaattaaaatatgaagg 45331

>gb|AC104637.5| Homo sapiens 3 BAC RP11-387L24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 99960

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tctttttattaaaatatga 35
             |||||||||||||||||||
Sbjct: 13154 tctttttattaaaatatga 13136

>gb|AC112645.3| Homo sapiens 3 BAC RP11-100J1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 46996

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    tctttttattaaaatatga 35
             |||||||||||||||||||
Sbjct: 32035 tctttttattaaaatatga 32053

>gb|AC011356.6| Homo sapiens chromosome 5 clone CTC-359M8, complete sequence
          Length = 62242

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    aggggaaagcaaatacaaa 54
             |||||||||||||||||||
Sbjct: 31947 aggggaaagcaaatacaaa 31929

>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      aaggggaaagcaaatacaa 53
               |||||||||||||||||||
Sbjct: 1864772 aaggggaaagcaaatacaa 1864754

>emb|BX465198.11| Zebrafish DNA sequence from clone DKEYP-84E12 in linkage group 12,
             complete sequence
          Length = 194152

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 14    ccatctttttattaaaatatgaa 36
             |||||||||| ||||||||||||
Sbjct: 31927 ccatctttttcttaaaatatgaa 31905

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 15       catctttttattaaaatat 33
                |||||||||||||||||||
Sbjct: 20863851 catctttttattaaaatat 20863869

>emb|BX005098.11| Zebrafish DNA sequence from clone DKEY-211F22 in linkage group 7,
             complete sequence
          Length = 100658

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     aaaacccatctttttatta 27
             |||||||||||||||||||
Sbjct: 59863 aaaacccatctttttatta 59845

>gb|AC008166.2| Homo sapiens BAC clone RP11-155J2 from 2, complete sequence
          Length = 176991

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     cccatctttttattaaaat 31
              |||||||||||||||||||
Sbjct: 161842 cccatctttttattaaaat 161860

>gb|AF130358.2|AF130358 Homo sapiens chromosome 21q11.2 PAC 90B5, complete sequence
          Length = 197778

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      aaaacccatctttttatta 27
              |||||||||||||||||||
Sbjct: 143473 aaaacccatctttttatta 143455

>dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, map 22, complete
             sequences
          Length = 199914

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     aaaacccatctttttatta 27
             |||||||||||||||||||
Sbjct: 24187 aaaacccatctttttatta 24169

>gb|AC118680.7| Mus musculus chromosome 8, clone RP24-381G7, complete sequence
          Length = 188031

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    catctttttattaaaatat 33
             |||||||||||||||||||
Sbjct: 73047 catctttttattaaaatat 73029

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 7       tcaaaacccatctttttat 25
               |||||||||||||||||||
Sbjct: 3420127 tcaaaacccatctttttat 3420145

>emb|AL929249.15| Mouse DNA sequence from clone RP23-273G23 on chromosome 2, complete
              sequence
          Length = 194209

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 14     ccatctttttattaaaatatgaa 36
              ||||||||| |||||||||||||
Sbjct: 106967 ccatcttttaattaaaatatgaa 106945

>emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chromosome 2, complete
             sequence
          Length = 227422

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    catctttttattaaaatat 33
             |||||||||||||||||||
Sbjct: 50412 catctttttattaaaatat 50430

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 2.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 15       catctttttattaaaatat 33
                |||||||||||||||||||
Sbjct: 21174086 catctttttattaaaatat 21174104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,405,800
Number of Sequences: 3902068
Number of extensions: 1405800
Number of successful extensions: 117980
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117620
Number of HSP's gapped (non-prelim): 360
length of query: 73
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 52
effective length of database: 17,151,101,840
effective search space: 891857295680
effective search space used: 891857295680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)