ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, compl... 42 0.87
2gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, compl... 42 0.87
3gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosom... 40 3.5
4gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosom... 40 3.5
5gb|AC140680.4| Mus musculus BAC clone RP24-548A12 from chromosom... 40 3.5
6gb|AC145267.5| Mus musculus BAC clone RP24-161F7 from chromosome... 40 3.5
7gb|AC140341.5| Mus musculus BAC clone RP24-261P21 from chromosom... 40 3.5
8gb|AC146471.1| Mus musculus BAC clone RP24-534L1 from chromosome... 40 3.5
9gb|AC147625.3| Mus musculus BAC clone RP24-348P17 from chromosom... 40 3.5
10gb|AC147111.2| Mus musculus BAC clone RP24-111K19 from chromosom... 40 3.5
11gb|AC145570.3| Mus musculus BAC clone RP24-95K23 from chromosome... 40 3.5
12gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosom... 40 3.5
13gb|AC145602.3| Mus musculus BAC clone RP24-240M7 from chromosome... 40 3.5
14gb|AC142265.4| Mus musculus BAC clone RP24-360F24 from chromosom... 40 3.5
15gb|AC129289.4| Mus musculus BAC clone RP24-482E11 from chromosom... 40 3.5
16gb|AC182456.2| Mus musculus BAC clone RP24-65H21 from chromosome... 40 3.5
17gb|AC145299.3| Mus musculus BAC clone RP24-129J23 from chromosom... 40 3.5
18gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosom... 40 3.5
19gb|AC132591.4| Mus musculus BAC clone RP24-279A11 from chromosom... 40 3.5
20gb|AC140255.4| Mus musculus BAC clone RP24-291E19 from chromosom... 40 3.5
21gb|AC144582.3| Mus musculus BAC clone RP24-323J22 from chromosom... 40 3.5
22gb|AC140423.2| Mus musculus BAC clone RP24-446B23 from chromosom... 40 3.5
23gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome... 40 3.5
24gb|AC143328.4| Mus musculus BAC clone RP24-119E16 from chromosom... 40 3.5
25gb|AC130834.4| Mus musculus BAC clone RP24-119M1 from chromosome... 40 3.5
26gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosom... 40 3.5
27gb|AC140450.4| Mus musculus BAC clone RP24-164A12 from chromosom... 40 3.5
28gb|AC144552.3| Mus musculus BAC clone RP24-271M6 from chromosome... 40 3.5
29gb|AC142473.2| Mus musculus BAC clone RP24-448M19 from chromosom... 40 3.5
30gb|AC132263.3| Mus musculus BAC clone RP24-371G24 from chromosom... 40 3.5
31gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome... 40 3.5
32gb|AC141470.4| Mus musculus BAC clone RP24-566E24 from chromosom... 40 3.5
33gb|AC184149.2| Mus musculus BAC clone RP24-143K6 from chromosome... 40 3.5
34gb|AC175493.3| Mus musculus BAC clone RP24-70B12 from chromosome... 40 3.5
35gb|AC182455.3| Mus musculus BAC clone RP24-77P23 from chromosome... 40 3.5
36gb|AC177804.3| Mus musculus BAC clone RP24-223C7 from chromosome... 40 3.5
37emb|CR861208.1| Pongo pygmaeus mRNA; cDNA DKFZp459B093 (from clo... 40 3.5
38gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome ... 40 3.5
39gb|AC182447.2| Mus musculus BAC clone RP24-476M3 from chromosome... 40 3.5
40gb|AC182036.2| Mus musculus BAC clone RP24-120L13 from chromosom... 40 3.5
41gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome... 40 3.5
42gb|AC182446.2| Mus musculus BAC clone RP24-518O14 from chromosom... 40 3.5
43gb|AC182554.2| Mus musculus BAC clone RP24-307C8 from chromosome... 40 3.5
44gb|AC182034.2| Mus musculus BAC clone RP24-188M3 from chromosome... 40 3.5
45gb|AC182111.1| Mus musculus BAC clone RP24-415L2 from chromosome... 40 3.5
46gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome... 40 3.5
47gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-... 40 3.5
48gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome... 40 3.5
49gb|AC127261.3| Mus musculus BAC clone RP24-316F4 from chromosome... 40 3.5
50gb|AC173708.4| Mus musculus BAC clone RP24-140O8 from chromosome... 40 3.5
51gb|AC174381.2| Mus musculus BAC clone RP24-206F6 from chromosome... 40 3.5
52gb|AC127548.4| Mus musculus BAC clone RP24-505K1 from chromosome... 40 3.5
53gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome ... 40 3.5
54gb|AC142503.3| Mus musculus BAC clone RP24-269M6 from Y, complet... 40 3.5
55emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in l... 40 3.5
56gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, comple... 40 3.5
57gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complet... 40 3.5
58gb|AC145485.4| Mus musculus BAC clone RP24-228I22 from Y, comple... 40 3.5
59gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complet... 40 3.5
60gb|AC147630.4| Mus musculus BAC clone RP24-530L22 from Y, comple... 40 3.5
61gb|AC156161.3| Mus musculus BAC clone RP24-403M10 from chromosom... 40 3.5
62emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chro... 40 3.5 
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence
          Length = 172114

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 10     aaaacccccaaagatgaacacagag 34
              |||||||||||||| ||||||||||
Sbjct: 152717 aaaacccccaaagaagaacacagag 152693
to top
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence
          Length = 226568

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 10    aaaacccccaaagatgaacacagag 34
             |||||||||||||| ||||||||||
Sbjct: 48962 aaaacccccaaagaagaacacagag 48938
to top
>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence
          Length = 171542

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 52629 agctgcaaaactgttgcatg 52610
to top
>gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosome y, complete sequence
          Length = 179613

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 102254 agctgcaaaactgttgcatg 102273
to top
>gb|AC140680.4| Mus musculus BAC clone RP24-548A12 from chromosome Y, complete sequence
          Length = 222176

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 43818 agctgcaaaactgttgcatg 43799
to top
>gb|AC145267.5| Mus musculus BAC clone RP24-161F7 from chromosome Y, complete sequence
          Length = 159830

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 46723 agctgcaaaactgttgcatg 46704
to top
>gb|AC140341.5| Mus musculus BAC clone RP24-261P21 from chromosome Y, complete sequence
          Length = 167722

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 151560 agctgcaaaactgttgcatg 151579



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 32940 agctgcaaaactgttgcatg 32921
to top
>gb|AC146471.1| Mus musculus BAC clone RP24-534L1 from chromosome Y, complete sequence
          Length = 133949

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 18084 agctgcaaaactgttgcatg 18103
to top
>gb|AC147625.3| Mus musculus BAC clone RP24-348P17 from chromosome Y, complete sequence
          Length = 176911

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 134904 agctgcaaaactgttgcatg 134885
to top
>gb|AC147111.2| Mus musculus BAC clone RP24-111K19 from chromosome Y, complete sequence
          Length = 181226

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 148631 agctgcaaaactgttgcatg 148650
to top
>gb|AC145570.3| Mus musculus BAC clone RP24-95K23 from chromosome Y, complete sequence
          Length = 168764

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 138638 agctgcaaaactgttgcatg 138619
to top
>gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosome Y, complete sequence
          Length = 149994

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 63990 agctgcaaaactgttgcatg 64009
to top
>gb|AC145602.3| Mus musculus BAC clone RP24-240M7 from chromosome Y, complete sequence
          Length = 160337

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 54291 agctgcaaaactgttgcatg 54310
to top
>gb|AC142265.4| Mus musculus BAC clone RP24-360F24 from chromosome Y, complete sequence
          Length = 164772

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 140800 agctgcaaaactgttgcatg 140819
to top
>gb|AC129289.4| Mus musculus BAC clone RP24-482E11 from chromosome Y, complete sequence
          Length = 181755

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 50211 agctgcaaaactgttgcatg 50192
to top
>gb|AC182456.2| Mus musculus BAC clone RP24-65H21 from chromosome y, complete sequence
          Length = 194102

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 189350 agctgcaaaactgttgcatg 189331
to top
>gb|AC145299.3| Mus musculus BAC clone RP24-129J23 from chromosome Y, complete sequence
          Length = 152085

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 66227 agctgcaaaactgttgcatg 66246
to top
>gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosome Y, complete sequence
          Length = 191085

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 97268 agctgcaaaactgttgcatg 97249
to top
>gb|AC132591.4| Mus musculus BAC clone RP24-279A11 from chromosome Y, complete sequence
          Length = 141121

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 115752 agctgcaaaactgttgcatg 115733
to top
>gb|AC140255.4| Mus musculus BAC clone RP24-291E19 from chromosome Y, complete
            sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  agctgcaaaactgttgcatg 181
            ||||||||||||||||||||
Sbjct: 3483 agctgcaaaactgttgcatg 3464
to top
>gb|AC144582.3| Mus musculus BAC clone RP24-323J22 from chromosome Y, complete
            sequence
          Length = 214364

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  agctgcaaaactgttgcatg 181
            ||||||||||||||||||||
Sbjct: 5169 agctgcaaaactgttgcatg 5150
to top
>gb|AC140423.2| Mus musculus BAC clone RP24-446B23 from chromosome Y, complete sequence
          Length = 203358

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 93137 agctgcaaaactgttgcatg 93118
to top
>gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome Y, complete sequence
          Length = 175697

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 73675 agctgcaaaactgttgcatg 73656
to top
>gb|AC143328.4| Mus musculus BAC clone RP24-119E16 from chromosome Y, complete sequence
          Length = 163625

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 46454 agctgcaaaactgttgcatg 46473
to top
>gb|AC130834.4| Mus musculus BAC clone RP24-119M1 from chromosome Y, complete sequence
          Length = 189883

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 59382 agctgcaaaactgttgcatg 59401
to top
>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence
          Length = 199089

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 117108 agctgcaaaactgttgcatg 117127
to top
>gb|AC140450.4| Mus musculus BAC clone RP24-164A12 from chromosome Y, complete sequence
          Length = 158839

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 123981 agctgcaaaactgttgcatg 123962
to top
>gb|AC144552.3| Mus musculus BAC clone RP24-271M6 from chromosome Y, complete sequence
          Length = 166988

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 38582 agctgcaaaactgttgcatg 38563
to top
>gb|AC142473.2| Mus musculus BAC clone RP24-448M19 from chromosome Y, complete sequence
          Length = 143928

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 44904 agctgcaaaactgttgcatg 44923
to top
>gb|AC132263.3| Mus musculus BAC clone RP24-371G24 from chromosome Y, complete sequence
          Length = 136102

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 99880 agctgcaaaactgttgcatg 99861
to top
>gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome Y, complete sequence
          Length = 149744

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 15138 agctgcaaaactgttgcatg 15119
to top
>gb|AC141470.4| Mus musculus BAC clone RP24-566E24 from chromosome Y, complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 49185 agctgcaaaactgttgcatg 49166
to top
>gb|AC184149.2| Mus musculus BAC clone RP24-143K6 from chromosome y, complete sequence
          Length = 150268

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 43216 agctgcaaaactgttgcatg 43197
to top
>gb|AC175493.3| Mus musculus BAC clone RP24-70B12 from chromosome y, complete sequence
          Length = 206261

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 78140 agctgcaaaactgttgcatg 78159
to top
>gb|AC182455.3| Mus musculus BAC clone RP24-77P23 from chromosome y, complete sequence
          Length = 216299

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 202324 agctgcaaaactgttgcatg 202305
to top
>gb|AC177804.3| Mus musculus BAC clone RP24-223C7 from chromosome y, complete sequence
          Length = 160566

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 14567 agctgcaaaactgttgcatg 14548
to top
>emb|CR861208.1| Pongo pygmaeus mRNA; cDNA DKFZp459B093 (from clone DKFZp459B093)
          Length = 4718

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 40   tcattataataaaaggctgaaaaa 63
            |||||||| |||||||||||||||
Sbjct: 4297 tcattatactaaaaggctgaaaaa 4320
to top
>gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome y, complete sequence
          Length = 186313

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 171969 agctgcaaaactgttgcatg 171988
to top
>gb|AC182447.2| Mus musculus BAC clone RP24-476M3 from chromosome y, complete sequence
          Length = 175402

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 87980 agctgcaaaactgttgcatg 87999
to top
>gb|AC182036.2| Mus musculus BAC clone RP24-120L13 from chromosome y, complete sequence
          Length = 185554

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 148880 agctgcaaaactgttgcatg 148899
to top
>gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome y, complete sequence
          Length = 196535

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 117558 agctgcaaaactgttgcatg 117577
to top
>gb|AC182446.2| Mus musculus BAC clone RP24-518O14 from chromosome y, complete sequence
          Length = 155144

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 57373 agctgcaaaactgttgcatg 57354
to top
>gb|AC182554.2| Mus musculus BAC clone RP24-307C8 from chromosome y, complete sequence
          Length = 138532

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 121420 agctgcaaaactgttgcatg 121439
to top
>gb|AC182034.2| Mus musculus BAC clone RP24-188M3 from chromosome y, complete sequence
          Length = 164621

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 115660 agctgcaaaactgttgcatg 115641
to top
>gb|AC182111.1| Mus musculus BAC clone RP24-415L2 from chromosome y, complete sequence
          Length = 162320

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 126879 agctgcaaaactgttgcatg 126860
to top
>gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome y, complete sequence
          Length = 185928

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 85857 agctgcaaaactgttgcatg 85876
to top
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene,
              complete cds
          Length = 278572

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaggctgaaaaagcattcta 71
              ||||||||||||||||||||
Sbjct: 255980 aaggctgaaaaagcattcta 255961
to top
>gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome ul, complete sequence
          Length = 133340

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 65438 agctgcaaaactgttgcatg 65457
to top
>gb|AC127261.3| Mus musculus BAC clone RP24-316F4 from chromosome unknown, complete
             sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 60341 agctgcaaaactgttgcatg 60360
to top
>gb|AC173708.4| Mus musculus BAC clone RP24-140O8 from chromosome y, complete sequence
          Length = 165998

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 49334 agctgcaaaactgttgcatg 49353
to top
>gb|AC174381.2| Mus musculus BAC clone RP24-206F6 from chromosome y, complete sequence
          Length = 172601

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 27217 agctgcaaaactgttgcatg 27198
to top
>gb|AC127548.4| Mus musculus BAC clone RP24-505K1 from chromosome unknown, complete
              sequence
          Length = 123175

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 116590 agctgcaaaactgttgcatg 116609
to top
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tcaaaacccccaaagatgaa 27
             ||||||||||||||||||||
Sbjct: 99996 tcaaaacccccaaagatgaa 99977
to top
>gb|AC142503.3| Mus musculus BAC clone RP24-269M6 from Y, complete sequence
          Length = 145946

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 13115 agctgcaaaactgttgcatg 13096
to top
>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5,
             complete sequence
          Length = 243510

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   acaaaagaatacaggaacaaagct 165
             ||||||||||||| ||||||||||
Sbjct: 50214 acaaaagaatacaagaacaaagct 50191
to top
>gb|AC150659.3| Mus musculus BAC clone RP24-147D24 from Y, complete sequence
          Length = 145892

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 97296 agctgcaaaactgttgcatg 97315
to top
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence
          Length = 199904

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 50612 agctgcaaaactgttgcatg 50631
to top
>gb|AC145485.4| Mus musculus BAC clone RP24-228I22 from Y, complete sequence
          Length = 144640

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agctgcaaaactgttgcatg 181
             ||||||||||||||||||||
Sbjct: 93134 agctgcaaaactgttgcatg 93115
to top
>gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complete sequence
          Length = 200241

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 107680 agctgcaaaactgttgcatg 107661
to top
>gb|AC147630.4| Mus musculus BAC clone RP24-530L22 from Y, complete sequence
          Length = 180127

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 161697 agctgcaaaactgttgcatg 161678
to top
>gb|AC156161.3| Mus musculus BAC clone RP24-403M10 from chromosome y, complete sequence
          Length = 155529

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    agctgcaaaactgttgcatg 181
              ||||||||||||||||||||
Sbjct: 147344 agctgcaaaactgttgcatg 147363
to top
>emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chromosome 4, complete
              sequence
          Length = 230672

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aaggctgaaaaagcattcta 71
              ||||||||||||||||||||
Sbjct: 139331 aaggctgaaaaagcattcta 139350


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,058,867
Number of Sequences: 3902068
Number of extensions: 3058867
Number of successful extensions: 60675
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60585
Number of HSP's gapped (non-prelim): 90
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top