ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl45f11 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = -3 Query: 390 VDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFTHK-- 217 +D+++G KT + RPNW FK++A NH + +GVF+CG + L+++ ++ Sbjct: 497 LDVITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDP 556 Query: 216 TNTKFEFHKENF 181 F ++KENF Sbjct: 557 RGVHFYYNKENF 568
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 57.4 bits (137), Expect = 8e-09 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSADFTHKT 214 D+++G KT + RPNW + FK +A H N R+GVF CG L L + +S + Sbjct: 499 DVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPR 558 Query: 213 NTKFEFHKENF 181 F F+KENF Sbjct: 559 GVHFIFNKENF 569
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 56.2 bits (134), Expect = 2e-08 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = -3 Query: 390 VDILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HK 217 +D+++G K + RPNW FK++A NH + +GVF+CG + L+++ ++ Sbjct: 497 LDVITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDP 556 Query: 216 TNTKFEFHKENF 181 F ++KENF Sbjct: 557 RGVHFYYNKENF 568
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQL-----SADFT 223 D+++G KT + RPNW + FK++A NH + +GVF+CG L L+++ SAD Sbjct: 498 DVITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSAD-- 555 Query: 222 HKTNTKFEFHKENF 181 F ++KE+F Sbjct: 556 -PRGVHFYYNKESF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HKT 214 D+L+G KT F RP W + F R+A H VGVF CG P L LR+ ++ Sbjct: 493 DVLTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPR 552 Query: 213 NTKFEFHKENF 181 +F F+KE F Sbjct: 553 KVQFYFNKETF 563
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKT 214 D+++G KT + RPNW + FK + H N R+GVF CG L L + +S + Sbjct: 500 DVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPR 559 Query: 213 NTKFEFHKENF 181 F F+KENF Sbjct: 560 GVHFIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKT 214 D+++G KT + RPNW + FK + H N R+GVF CG L L + +S + Sbjct: 500 DVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPR 559 Query: 213 NTKFEFHKENF 181 F F+KENF Sbjct: 560 GVHFIFNKENF 570
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 55.5 bits (132), Expect = 3e-08 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKT 214 D+++G KT + RPNW + FK +A H R+GVF CG L L + +S + Sbjct: 414 DVITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPR 473 Query: 213 NTKFEFHKENF 181 F F+KENF Sbjct: 474 GVHFIFNKENF 484
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 55.1 bits (131), Expect = 4e-08 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSADFTHKT 214 D+++G KT + RPNW + FK +A H N +GVF CG L L + +S + Sbjct: 500 DVITGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPR 559 Query: 213 NTKFEFHKENF 181 F F+KENF Sbjct: 560 GVHFIFNKENF 570
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HKT 214 DI++G KT F RP W + F +A +H VGVF CG L LR+ ++ Sbjct: 494 DIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPR 553 Query: 213 NTKFEFHKENF 181 +F F+KENF Sbjct: 554 KVQFYFNKENF 564
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 44.3 bits (103), Expect = 7e-05 Identities = 24/69 (34%), Positives = 35/69 (50%) Frame = -3 Query: 387 DILSGTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNT 208 D ++G +T RP+W VF++VA + +V VF+CG P L L+ H Sbjct: 704 DSITGLQTRTQPGRPDWSKVFQKVAAEKKG-KVQVFFCGSPALAKVLK------GHCEKF 756 Query: 207 KFEFHKENF 181 F F +ENF Sbjct: 757 GFRFFQENF 765
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + FK + H R +GVF CG P + + + + T Sbjct: 1483 LFTGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRT 1542 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1543 HFSHHYENF 1551
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 390 VDILSGTSVKTHFARPNWRSVFKRVAVNHENQ-RVGVFYCGEPVLVPQLRQLSADFTHKT 214 + + +G K HF RPN+++ F+ + H+ Q ++GVF CG L + + AD + Sbjct: 1426 ISMFTGLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCADANRQR 1485 Query: 213 NTKFEFHK 190 + H+ Sbjct: 1486 DAPSFAHR 1493
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + F + H R +GVF CG P + + + + T Sbjct: 1485 LFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRT 1544 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1545 HFSHHYENF 1553
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + F + H R +GVF CG P + + + + T Sbjct: 1483 LFTGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRT 1542 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1543 HFSHHYENF 1551
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + F + H R +GVF CG P + + + + T Sbjct: 1483 LFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRT 1542 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1543 HFSHHYENF 1551
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + F + H R +GVF CG P + + + + T Sbjct: 1477 LFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQT 1536 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1537 HFVHHYENF 1545
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 36.6 bits (83), Expect = 0.015 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + F + H R +GVF CG P + + + + Sbjct: 1480 LFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRA 1539 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1540 HFMHHYENF 1548
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 33.9 bits (76), Expect = 0.096 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHEN-QRVGVFYCGEPVLVPQLRQLSADFTHKTNT 208 + +G THF RP + + H ++GVF CG P + + + + Sbjct: 1449 LFTGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRA 1508 Query: 207 KFEFHKENF 181 F H ENF Sbjct: 1509 HFVHHYENF 1517
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 33.9 bits (76), Expect = 0.096 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = -3 Query: 384 ILSGTSVKTHFARPNWRSVFKRVAVNHEN-QRVGVFYCGEPVLVPQLRQLSADFTHKTN- 211 I +G HF RP+ S K V H ++GVF CG L + + D +KT Sbjct: 1405 IFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMS-ACDEVNKTRK 1463 Query: 210 -TKFEFHKENF 181 F H ENF Sbjct: 1464 LPYFIHHFENF 1474
>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)| Length = 319 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -1 Query: 263 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 99 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 179 FICEQCGKCK-------CGECTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVK 226
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 33.1 bits (74), Expect = 0.16 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -1 Query: 263 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 99 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 173 FICEQCGKCK-------CGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVK 220
>ENO_SCHJA (P33676) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -1 Query: 182 SSSVACIRICLCHASSGEL-YGLYYYFVKVGNKMGVVLPSPVFSLV 48 ++++ + + +C A + EL LY Y K+ V++P P F+++ Sbjct: 108 ANAILGVSLAVCKAGAAELNLPLYRYIAKLAGHKDVIMPVPAFNVI 153
>TXND8_MOUSE (Q69AB2) Thioredoxin domain-containing protein 8| (Spermatid-specific thioredoxin-3) (Sptrx-3) (Thioredoxin-6) Length = 127 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -1 Query: 287 GFSIVVSLFLCRSCGSCRQISPTRQTQSLSFTRRTSSSV 171 G +VV F + CG C+ I+P Q SL + T + V Sbjct: 19 GNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFAQV 57
>SPY3_HUMAN (O43610) Sprouty homolog 3 (Spry-3)| Length = 288 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -1 Query: 266 LFLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 99 LF+C CG C+ + T R S C + CLC A S YG VK Sbjct: 144 LFICEECGRCKCVPCTA-------ARPLPSCWLCNQRCLCSAESLLDYGTCLCCVK 192
>CPSM_RAT (P07756) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 299 FSWLTATRLKTLRQLGRAK*VLTLVPDKMST 391 F W + ++TLRQLG+ V+ P+ +ST Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVST 1022
>CPSM_MOUSE (Q8C196) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 299 FSWLTATRLKTLRQLGRAK*VLTLVPDKMST 391 F W + ++TLRQLG+ V+ P+ +ST Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVST 1022
>CPSM_HUMAN (P31327) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 299 FSWLTATRLKTLRQLGRAK*VLTLVPDKMST 391 F W + ++TLRQLG+ V+ P+ +ST Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVST 1022
>CTAA_BACSU (P12946) Cytochrome aa3-controlling protein| Length = 306 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = -1 Query: 200 SFTRRTSSSVACIRICLCHASSGELYGLYYYFVKVGNKMGVVL 72 ++ R T SS+AC + LC + L ++ +V++G++ +L Sbjct: 180 AYVRHTESSLACPNVPLCSPLNNGLPTQFHEWVQMGHRAAALL 222
>Y934_METJA (Q58344) Hypothetical polyferredoxin-like protein MJ0934| Length = 209 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -1 Query: 272 VSLFLCRSCGSCRQISPTRQTQSLSFTRRTSSSV--ACIRIC 153 + L C CG C + PT + SF R T SV C+ +C Sbjct: 42 IQLTECIGCGLCVDVCPTNAIKIFSF-RETICSVCGTCVDVC 82
>RPOC_BORGA (Q661N0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1377 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 280 ENPDTLILMVDRDTLEDASPIRPGKVSLDAGSGQDVN 390 E+ D I ++D +E AS + PG L GQ++N Sbjct: 1079 ESLDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQNIN 1115
>Y514_METJA (Q57934) Hypothetical polyferredoxin-like protein MJ0514| Length = 250 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 281 SIVVSLFLCRSCGSCRQISPTR 216 SI V+L LC CG+C ++ P + Sbjct: 155 SIEVNLDLCMGCGACAEVCPKK 176
>ENO_HOMGA (P56252) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 433 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -1 Query: 182 SSSVACIRICLCHASSGEL-YGLYYYFVKVGNKMGVVLPSPVFSLV 48 ++++ + + +C A + EL LY + + N V+LP P F+++ Sbjct: 107 ANAILGVSLAICKAGAAELGIPLYRHIANLANYDEVILPVPAFNVI 152
>FRHG_METJA (Q60340) Coenzyme F420 hydrogenase gamma subunit (EC 1.12.98.1)| (8-hydroxy-5-deazaflavin-reducing hydrogenase gamma subunit) (FRH) Length = 230 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -1 Query: 275 VVSLFLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLC 147 VV+ LC CG+C PTR + L R CI+ C Sbjct: 172 VVNKSLCMGCGTCAAACPTRAIEMLD-GRPNVLKELCIKCGAC 213
>TXND8_RAT (Q69AB1) Thioredoxin domain-containing protein 8| (Spermatid-specific thioredoxin-3) (Sptrx-3) Length = 127 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 287 GFSIVVSLFLCRSCGSCRQISPTRQTQSLSF 195 G +VV F + CG C+ I+P Q SL + Sbjct: 19 GNRLVVVEFSAQWCGPCKMIAPAFQAMSLQY 49
>TTL11_HUMAN (Q8NHH1) Tubulin--tyrosine ligase-like protein 11| Length = 538 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = -3 Query: 279 YCGEPVLVPQLRQLSADFTHKTNTKFEFHKENF 181 +C EP P + L F H TN H NF Sbjct: 412 FCTEPYQEPTPKNLHRIFMHLTNYSLNIHSGNF 444
>METE_BRAJA (Q9AMV8) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 781 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +1 Query: 226 EICRQLPQLRHKNRLTTIENPDTLILMVDRDTLEDASPIR 345 E+CRQL L ++ + +EN ++ +D L + P+R Sbjct: 594 EVCRQLA-LAMRDEVRDLENAGAAMIQIDEAALREGLPLR 632 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,610,297 Number of Sequences: 219361 Number of extensions: 1012136 Number of successful extensions: 2425 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2418 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
