>RRP5_YEAST (Q05022) rRNA biogenesis protein RRP5|
          Length = 1729

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -3

Query: 364  YLRYEKAQGDEERIEHVKQKAMEYV 290
            +L++E+++GDE+ IE+VK KA EYV
Sbjct: 1695 WLQFEESEGDEKTIEYVKAKATEYV 1719

>RRP5_HUMAN (Q14690) RRP5 protein homolog (Programmed cell death protein 11)|
          Length = 1871

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -3

Query: 364  YLRYEKAQGDEERIEHVKQKAMEYVE 287
            YL YEK  G E+ ++ VK KA+EYVE
Sbjct: 1838 YLDYEKQHGTEKDVQAVKAKALEYVE 1863

>CO9_FUGRU (P79755) Complement component C9 precursor|
          Length = 586

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 340 GDEERIEHVKQKAMEYVEISRA*CAKPCHRAGVICLL 230
           G   RI ++KQ   +YV        +PCH  G + LL
Sbjct: 470 GANSRIANLKQATADYVAEYNVCKCRPCHNGGTLALL 506

>YR784_MIMIV (Q5UPS1) Putative ankyrin repeat protein R784|
          Length = 433

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 19/94 (20%)
 Frame = -1

Query: 273 DVQNLAIVQESSACWGKLST*SWMVICSSPS*NAANQRSAF-----LLICAM*LWQRMCQ 109
           D  N+ I+ ES+  +G+L    WM   S  + N AN++S        L            
Sbjct: 124 DKYNIVIIPESAFIYGRLDIIDWMF--SRQNQNNANKKSTIKKTVDFLKSKFISHDYFYD 181

Query: 108 SGLQLLC--------------TCAVRQFWCCYTC 49
           S ++L C               C+VRQ W  Y+C
Sbjct: 182 SMIELACLYGHVHVVQYFIDNQCSVRQKWLYYSC 215

>LSPA_LACLA (Q9CGU5) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 150

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = -1

Query: 276 PDVQNLAIVQESSACWGKLST*SWMVICSSPS*NAANQRSAFLLICAM*LWQRMCQS--- 106
           P+V +L  ++   A W   S   W  +  +P           L++    LW++M Q+   
Sbjct: 38  PNVLSLTYIKNDGAAWSSFSGQQWFFLILTP---------IVLVVALWFLWKKMAQNWYF 88

Query: 105 -GLQLLCTCAVRQF 67
            GL L+   A+  F
Sbjct: 89  IGLTLIIAGALGNF 102

>CAD19_HUMAN (Q9H159) Cadherin-19 precursor|
          Length = 772

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 134 CDCGRECASQGCSFYAHVRSANFGVVTLVMIYVLLLI 24
           CDCG   ++Q C +   V S  F    ++ I + ++I
Sbjct: 571 CDCGDSGSTQTCQYQELVLSMGFKTEVIIAILICIMI 607

>LSPA_LACLC (Q48729) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 150

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = -1

Query: 276 PDVQNLAIVQESSACWGKLST*SWMVICSSPS*NAANQRSAFLLICAM*LWQRMCQ---- 109
           PDV +L  ++   A W   S   W  +  +P           L++    LW++M Q    
Sbjct: 38  PDVLSLTYIKNDGAAWSSFSGQQWFFLVLTP---------IVLIVALWFLWKKMGQNWYF 88

Query: 108 SGLQLLCTCAV 76
           +GL L+   A+
Sbjct: 89  AGLTLIIAGAL 99

>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen|
           homolog)
          Length = 925

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +2

Query: 77  TAHVHKSCSPDWHILCHNHIAQIRRNADL*LAAFQEGELQITIQDHVDSLPQQA--DDSC 250
           T H  K CS  +H L  N +A    +  + +   Q G  ++ +Q H D +   A   D  
Sbjct: 591 TGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQ 650

Query: 251 TMARFCTSG 277
            +A  C  G
Sbjct: 651 QLATVCKDG 659

>FINC_HUMAN (P02751) Fibronectin precursor (FN) (Cold-insoluble globulin) (CIG)|
          Length = 2386

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 126  WQRMCQSGLQLLCTC 82
            W+RM +SG +LLC C
Sbjct: 2221 WERMSESGFKLLCQC 2235

>RBL_METMA (Q8PXG9) Ribulose bisphosphate carboxylase (EC 4.1.1.39) (RuBisCO)|
          Length = 428

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = -2

Query: 263 TLPSCRSHLLAGVNYPRDLGW*SAAHLLEMLLIRGLHSFLFARC---DCGRECASQGCSF 93
           T P+CR  ++  +N+ +DLG   A++++  ++  G  +    R    D G    +  C  
Sbjct: 219 TAPTCRE-MIRRMNFLKDLG---ASYVMVDIVPAGWTAIQTLREEAEDAGLALHAHRCMH 274

Query: 92  YAHVRSANFGVVTLVMIYVLLLIG 21
            A+ R+   G+  LV+  +  LIG
Sbjct: 275 SAYTRNPRHGISMLVVAKLCRLIG 298


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,208,982
Number of Sequences: 219361
Number of extensions: 1175947
Number of successful extensions: 2634
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2633
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)