>emb|AL157370.7| Human DNA sequence from clone RP11-289M23 on chromosome 6, complete
             sequence
          Length = 34674

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 316   tttggcagcacattttattttccttt 341
             |||||||||||| |||||||||||||
Sbjct: 34193 tttggcagcacaatttattttccttt 34168

>gb|AC134551.4| Mus musculus BAC clone RP24-274B10 from chromosome 5, complete sequence
          Length = 123372

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    catctgatttggtaatgatac 79
             |||||||||||||||||||||
Sbjct: 11464 catctgatttggtaatgatac 11484

>gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosome 16, complete
             sequence
          Length = 227299

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 325   acattttattttccttttggccttt 349
             ||||||||||||||||| |||||||
Sbjct: 33471 acattttattttcctttgggccttt 33495

>gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, complete sequence
          Length = 156267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 325   acattttattttccttttggccttt 349
             ||||||||||||||||| |||||||
Sbjct: 12637 acattttattttcctttgggccttt 12613

>gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, complete sequence
          Length = 203266

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 59   catctgatttggtaatgatac 79
            |||||||||||||||||||||
Sbjct: 4319 catctgatttggtaatgatac 4299

>gb|BC077563.1| Xenopus laevis MGC83528 protein, mRNA (cDNA clone MGC:83528
           IMAGE:5078359), complete cds
          Length = 2741

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 tggaagaagcactggttcgt 310
           ||||||||||||||||||||
Sbjct: 180 tggaagaagcactggttcgt 199

>gb|AC114655.12| Mus musculus chromosome 1, clone RP24-160J12, complete sequence
          Length = 162542

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ctgggtgtgggtacaaaatt 130
              ||||||||||||||||||||
Sbjct: 114763 ctgggtgtgggtacaaaatt 114782

>ref|XM_416273.1| PREDICTED: Gallus gallus similar to TRIO and F-actin binding
           protein; Trio-associated repeat on actin; Mus EST 478828
           (LOC418036), mRNA
          Length = 429

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 tggaagaagcactggttcgt 310
           ||||||||||||||||||||
Sbjct: 157 tggaagaagcactggttcgt 176

>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     gcacattttattttcctttt 342
               ||||||||||||||||||||
Sbjct: 1635045 gcacattttattttcctttt 1635064

>ref|XM_381896.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01720.1)
           partial mRNA
          Length = 2592

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 atggccatccagacttgcct 291
           ||||||||||||||||||||
Sbjct: 329 atggccatccagacttgcct 348

>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5
          Length = 335050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    agcacattttattttccttt 341
              ||||||||||||||||||||
Sbjct: 243059 agcacattttattttccttt 243078

>gb|AC022820.11| Homo sapiens chromosome 8, clone RP11-46G17, complete sequence
          Length = 180899

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    gcacattttattttcctttt 342
              ||||||||||||||||||||
Sbjct: 123293 gcacattttattttcctttt 123312

>gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, complete sequence
          Length = 160454

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    gcacattttattttcctttt 342
              ||||||||||||||||||||
Sbjct: 122625 gcacattttattttcctttt 122606

>emb|BX005264.10| Zebrafish DNA sequence from clone DKEY-63D22 in linkage group 2, complete
              sequence
          Length = 212605

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     taatcatattattatttccg 30
              ||||||||||||||||||||
Sbjct: 118879 taatcatattattatttccg 118860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,912,018
Number of Sequences: 3902068
Number of extensions: 4912018
Number of successful extensions: 88648
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88590
Number of HSP's gapped (non-prelim): 58
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)