ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 5e-62
2gb|AY108425.1| Zea mays PCO146490 mRNA sequence 240 3e-60
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 8e-30
4gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 139 8e-30
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
6gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 139 8e-30
7emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on ... 44 0.36
8gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 44 0.36
9gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete ... 44 0.36
10dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds 44 0.36
11dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.36
12emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chro... 42 1.4
13emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chr... 42 1.4
14emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chr... 42 1.4
15emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chr... 42 1.4
16gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, c... 42 1.4
17gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park C... 42 1.4
18gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, com... 42 1.4
19gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswel... 42 1.4
20gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 ... 42 1.4
21ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1... 40 5.6
22ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09... 40 5.6
23ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09... 40 5.6
24gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complet... 40 5.6
25emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 5.6
26gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence 40 5.6
27emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for impor... 40 5.6
28gb|AY117313.1| Arabidopsis thaliana putative importin alpha prot... 40 5.6
29gb|AY090944.1| Arabidopsis thaliana putative importin alpha prot... 40 5.6
30emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in ... 40 5.6
31emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 40 5.6
32gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Ca... 40 5.6
33gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 40 5.6
34emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 40 5.6
35gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 5.6
36gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mR... 40 5.6
37gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete s... 40 5.6
38emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Co... 40 5.6
39gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O... 40 5.6
40gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2... 40 5.6
41gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, com... 40 5.6
42gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, com... 40 5.6
43gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, com... 40 5.6
44gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11... 40 5.6
45gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q... 40 5.6
46gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosom... 40 5.6 
>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full
            insert sequence
          Length = 3073

 Score =  246 bits (124), Expect = 5e-62
 Identities = 160/172 (93%)
 Strand = Plus / Minus

                                                                        
Query: 250  tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 309
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 2691 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 2632

                                                                        
Query: 310  tgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaac 369
            |||||| ||||| || |||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 2631 tgccacgaggtttgcgatctttgacttgactgcacgcaaggtcccatcagtatctctaac 2572

                                                                
Query: 370  attgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttga 421
            ||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 2571 attgtccatacaatttagagcaaccttcaagagatctggcacacaagcttga 2520
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>gb|AY108425.1| Zea mays PCO146490 mRNA sequence
          Length = 775

 Score =  240 bits (121), Expect = 3e-60
 Identities = 160/173 (92%)
 Strand = Plus / Minus

                                                                       
Query: 249 ttcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgc 308
           ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 609 ttcatatgcactgtgccaccttctgatacaaatcctgtggccaattccggctcatgttgc 550

                                                                       
Query: 309 ttgccacaaggttcgcaatctttgacttgacagcacgcagggtcccatcggtatctctaa 368
           |||| |||||||| || |||||||| |||||||| |||| ||||||||| ||||||||||
Sbjct: 549 ttgctacaaggtttgcgatctttgatttgacagcgcgcaaggtcccatcagtatctctaa 490

                                                                
Query: 369 cattgtccatgcagtttagagcaaccttcaggagatctggcacacaagcttga 421
           ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 489 cattgtcaatgcaatttagagcaaccttcaggagatctggcacgcaagcttga 437
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 8e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 328      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 387
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13075933 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13075992

                                                  
Query: 388      agcaaccttcaggagatctggcacacaagcttga 421
                ||||||||||| ||||||||||||||||||||||
Sbjct: 13075993 agcaaccttcaagagatctggcacacaagcttga 13076026



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 250      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 309
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13075155 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13075214

                            
Query: 310      tgccacaaggtt 321
                |||||| |||||
Sbjct: 13075215 tgccacgaggtt 13075226
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>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
              from chromosome 3, complete sequence
          Length = 151173

 Score =  139 bits (70), Expect = 8e-30
 Identities = 88/94 (93%)
 Strand = Plus / Minus

                                                                          
Query: 328    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 387
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 150683 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 150624

                                                
Query: 388    agcaaccttcaggagatctggcacacaagcttga 421
              ||||||||||| ||||||||||||||||||||||
Sbjct: 150623 agcaaccttcaagagatctggcacacaagcttga 150590
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 8e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                            
Query: 328      ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 387
                |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 13072708 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 13072767

                                                  
Query: 388      agcaaccttcaggagatctggcacacaagcttga 421
                ||||||||||| ||||||||||||||||||||||
Sbjct: 13072768 agcaaccttcaagagatctggcacacaagcttga 13072801



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                            
Query: 250      tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 309
                |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 13071930 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 13071989

                            
Query: 310      tgccacaaggtt 321
                |||||| |||||
Sbjct: 13071990 tgccacgaggtt 13072001
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>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
              complete sequence
          Length = 176637

 Score =  139 bits (70), Expect = 8e-30
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                          
Query: 328    ctttgacttgacagcacgcagggtcccatcggtatctctaacattgtccatgcagtttag 387
              |||||||||||| ||||||| ||||||||| |||||||||||||||||||| || |||||
Sbjct: 153631 ctttgacttgactgcacgcaaggtcccatcagtatctctaacattgtccatacaatttag 153690

                                                
Query: 388    agcaaccttcaggagatctggcacacaagcttga 421
              ||||||||||| ||||||||||||||||||||||
Sbjct: 153691 agcaaccttcaagagatctggcacacaagcttga 153724



 Score =  111 bits (56), Expect = 2e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                          
Query: 250    tcatatgcactgagccaccttctggtacaaatcctgtggccaattcctgctcatgttgct 309
              |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 152853 tcatatgcactgcgccaccttctgatacaaatcctgtggccagttcctgctcatgttgct 152912

                          
Query: 310    tgccacaaggtt 321
              |||||| |||||
Sbjct: 152913 tgccacgaggtt 152924
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>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete
              sequence
          Length = 127587

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 157    ccttcaactacctgttcaaatg 178
              ||||||||||||||||||||||
Sbjct: 116078 ccttcaactacctgttcaaatg 116057
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>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    atgaaaagtggcagttttcttg 67
             ||||||||||||||||||||||
Sbjct: 92561 atgaaaagtggcagttttcttg 92540
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>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence
          Length = 172914

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 363    ctctaacattgtccatgcagtttaga 388
              |||||||||||| |||||||||||||
Sbjct: 139697 ctctaacattgtacatgcagtttaga 139672
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>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds
          Length = 881

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 156 accttcaactacctgttcaaat 177
           ||||||||||||||||||||||
Sbjct: 666 accttcaactacctgttcaaat 645
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>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete
              sequence
          Length = 175784

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 363    ctctaacattgtccatgcagtttaga 388
              |||||||||||| |||||||||||||
Sbjct: 133427 ctctaacattgtacatgcagtttaga 133452
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>emb|AL646090.5| Human DNA sequence from clone RP11-542F9 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 88711

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    aacaagacagacatggttcca 117
             |||||||||||||||||||||
Sbjct: 87086 aacaagacagacatggttcca 87106
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>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains
           the 3' part of a novel gene, complete sequence
          Length = 157929

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  aacaagacagacatggttcca 117
           |||||||||||||||||||||
Sbjct: 375 aacaagacagacatggttcca 395
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>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains
           the 3' end of the Slit3 gene for slit homolog 3
           (Drosophila), complete sequence
          Length = 113164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 208 gatagcccatttccctagcac 228
           |||||||||||||||||||||
Sbjct: 16  gatagcccatttccctagcac 36
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>emb|AL732401.6| Mouse DNA sequence from clone RP23-405K20 on chromosome 11 Contains
             part of the Slit3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 89624

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   gatagcccatttccctagcac 228
             |||||||||||||||||||||
Sbjct: 87640 gatagcccatttccctagcac 87660
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>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence
          Length = 175840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaacaagacagacatggttcc 116
             |||||||||||||||||||||
Sbjct: 10044 aaacaagacagacatggttcc 10064
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>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 209961

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 208    gatagcccatttccctagcac 228
              |||||||||||||||||||||
Sbjct: 113002 gatagcccatttccctagcac 112982
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>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence
          Length = 175579

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aaacaagacagacatggttcc 116
             |||||||||||||||||||||
Sbjct: 97179 aaacaagacagacatggttcc 97199
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>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146120

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   gatagcccatttccctagcac 228
             |||||||||||||||||||||
Sbjct: 94042 gatagcccatttccctagcac 94022
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>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete
            sequence
          Length = 59261

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 165  tacctgttcaaatggtgttgg 185
            |||||||||||||||||||||
Sbjct: 6168 tacctgttcaaatggtgttgg 6188
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>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.3 mRNA, complete cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
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>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.2 mRNA, complete cds
          Length = 2404

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
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>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript
           variant AT1G09270.1 mRNA, complete cds
          Length = 2710

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
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>gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complete cds
          Length = 43001

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gcagttttcttgaattttga 75
             ||||||||||||||||||||
Sbjct: 35618 gcagttttcttgaattttga 35599
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>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23 Contains
              a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
              pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    tgttggggaatggggagctt 199
              ||||||||||||||||||||
Sbjct: 108770 tgttggggaatggggagctt 108789
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>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence
          Length = 2406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 877 acctgttcaaatggtgttgg 858
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>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4
          Length = 1778

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 713 acctgttcaaatggtgttgg 694
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>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 1648

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 740 acctgttcaaatggtgttgg 721
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>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270)
           mRNA, complete cds
          Length = 2001

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 838 acctgttcaaatggtgttgg 819
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>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21,
              complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     taaatcatgaaaagtggcagtttt 63
              |||||||| |||||||||||||||
Sbjct: 154062 taaatcataaaaagtggcagtttt 154085
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    cttgaattttgacacacaca 83
             ||||||||||||||||||||
Sbjct: 38706 cttgaattttgacacacaca 38725
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>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99727

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    acagccttggatttagtaataaat 44
             |||||||||||||| |||||||||
Sbjct: 11641 acagccttggattttgtaataaat 11618
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>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aacaagacagacatggttcc 116
              ||||||||||||||||||||
Sbjct: 138418 aacaagacagacatggttcc 138399
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>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
              complete sequence
          Length = 173690

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttagtaataaatcatgaaaa 52
              ||||||||||||||||||||
Sbjct: 121635 ttagtaataaatcatgaaaa 121616
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    acaaatcctgtggccaattc 295
              ||||||||||||||||||||
Sbjct: 128798 acaaatcctgtggccaattc 128817
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>gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mRNA, partial cds
          Length = 1126

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 828 acctgttcaaatggtgttgg 809
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>gb|AC013602.4|AC013602 Homo sapiens, clone RP11-10C6, complete sequence
          Length = 152770

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aacaagacagacatggttcc 116
              ||||||||||||||||||||
Sbjct: 111271 aacaagacagacatggttcc 111252
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>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS50ZB07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1954

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 acctgttcaaatggtgttgg 185
           ||||||||||||||||||||
Sbjct: 798 acctgttcaaatggtgttgg 779
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>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete
             sequence
          Length = 39456

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tggatttagtaataaatcatgaaa 51
             ||||||||||||| ||||||||||
Sbjct: 9978  tggatttagtaatgaatcatgaaa 10001
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>gb|AC069550.4|AC069550 Sequence of chromosome 2 clone RP11-471B2 containing Homo sapiens NRXNI
              gene, partial cds, complete sequence
          Length = 166054

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     aacaagacagacatggttcc 116
              ||||||||||||||||||||
Sbjct: 140103 aacaagacagacatggttcc 140122
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>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aacaagacagacatggttcc 116
             ||||||||||||||||||||
Sbjct: 96245 aacaagacagacatggttcc 96264
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>gb|AC103681.4| Homo sapiens chromosome 11, clone CTD-2560E9, complete sequence
          Length = 215485

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    aacaagacagacatggttcc 116
             ||||||||||||||||||||
Sbjct: 98729 aacaagacagacatggttcc 98710
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>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence
          Length = 123934

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   gctcatgttgcttgccacaa 317
             ||||||||||||||||||||
Sbjct: 27805 gctcatgttgcttgccacaa 27786
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>gb|AF254136.3| Homo sapiens chromosome 8 clone RP11-386F22, RP11-820H12 map q24.2,
              complete sequence
          Length = 184865

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     aacaagacagacatggttcc 116
              ||||||||||||||||||||
Sbjct: 159177 aacaagacagacatggttcc 159196
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>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete
             sequence
          Length = 170376

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    aacaagacagacatggttcc 116
             ||||||||||||||||||||
Sbjct: 34385 aacaagacagacatggttcc 34404
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>gb|AC154126.2| Mus musculus BAC clone RP23-471O11 from chromosome 7, complete sequence
          Length = 198860

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    tttccctagcacttcaggcc 236
              ||||||||||||||||||||
Sbjct: 107023 tttccctagcacttcaggcc 107004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,993,047
Number of Sequences: 3902068
Number of extensions: 3993047
Number of successful extensions: 78129
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78028
Number of HSP's gapped (non-prelim): 101
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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