Clone Name | rbastl45f02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HISX2_RALEJ (Q46N53) Histidinol dehydrogenase 2 (EC 1.1.1.23) (H... | 29 | 6.3 | 2 | SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68) | 29 | 6.3 |
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>HISX2_RALEJ (Q46N53) Histidinol dehydrogenase 2 (EC 1.1.1.23) (HDH 2)| Length = 436 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 373 HSRDLDNWFLVSSCYSQLFSAARTTV 450 H+ DLD W +CY LF TTV Sbjct: 323 HTADLDWWLANLTCYGSLFLGEETTV 348
>SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68)| Length = 677 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/82 (25%), Positives = 33/82 (40%) Frame = +2 Query: 206 YKKGALTRRV*SVNNQLSFGFLKFAFTSTVLLL*ALPSRCDEXAVILHQQRASGEVTAAT 385 YKK LT + Q SFG + F L A+ A+++ Q+ G + Sbjct: 196 YKKLVLTTTFFAGIFQASFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITN 255 Query: 386 LTTGSLCPLAIRNCFPQLEQQW 451 TT + +R + +QQW Sbjct: 256 FTTNTDIVSVLRAVWRSCQQQW 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,676,285 Number of Sequences: 219361 Number of extensions: 992971 Number of successful extensions: 1938 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1938 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)