ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HISX2_RALEJ (Q46N53) Histidinol dehydrogenase 2 (EC 1.1.1.23) (H... 29 6.3
2SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68) 29 6.3

>HISX2_RALEJ (Q46N53) Histidinol dehydrogenase 2 (EC 1.1.1.23) (HDH 2)|
          Length = 436

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 373 HSRDLDNWFLVSSCYSQLFSAARTTV 450
           H+ DLD W    +CY  LF    TTV
Sbjct: 323 HTADLDWWLANLTCYGSLFLGEETTV 348



to top

>SUT21_ARATH (O04722) Sulfate transporter 2.1 (AST68)|
          Length = 677

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = +2

Query: 206 YKKGALTRRV*SVNNQLSFGFLKFAFTSTVLLL*ALPSRCDEXAVILHQQRASGEVTAAT 385
           YKK  LT    +   Q SFG  +  F    L   A+       A+++  Q+  G +    
Sbjct: 196 YKKLVLTTTFFAGIFQASFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITN 255

Query: 386 LTTGSLCPLAIRNCFPQLEQQW 451
            TT +     +R  +   +QQW
Sbjct: 256 FTTNTDIVSVLRAVWRSCQQQW 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,676,285
Number of Sequences: 219361
Number of extensions: 992971
Number of successful extensions: 1938
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top