>HTK7_HYDAT (Q25197) Putative insulin-like peptide receptor precursor (EC|
            2.7.10.1)
          Length = 1477

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 38   KFYTNNEPEEVDKKKKTSATERHGAHLFPTCLVGPNLHIQHQCTMSTVCNYPCEQETMEY 217
            K+  N+ PEE+ KKKK   ++R+ A     C   P L ++     S   N+    E M+Y
Sbjct: 1391 KYDANDTPEEIPKKKKRPRSKRNSAVDSNACETKPMLRVE-----SLYDNHDAFSENMQY 1445

>TRM2_YEAST (P33753) Endo-exonuclease NUCR (EC 3.-.-.-)|
          Length = 617

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 183 ATILVSKKQWSIITCYRHMWSLHK 254
           A ++ S K+WSIITC R  W++ K
Sbjct: 23  AHLISSIKRWSIITCMRCFWTVQK 46

>SNX18_HUMAN (Q96RF0) Sorting nexin-18 (Sorting nexin associated Golgi protein|
           1)
          Length = 628

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
 Frame = +2

Query: 77  KKKTSATERHGAHLFPTCLVGPNLHIQHQCTMSTVCNYPC-----EQETMEYNHMLQAYV 241
           K+K    E  GA+ F T    P   +  Q   S +  + C     +   ++ NH    + 
Sbjct: 394 KRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFA 453

Query: 242 VSTQKVYRNQYSKQGQNF 295
                 ++ +Y K GQ+F
Sbjct: 454 RKQVTGFKKEYQKVGQSF 471

>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein|
           1)
          Length = 614

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
 Frame = +2

Query: 77  KKKTSATERHGAHLFPTCLVGPNLHIQHQCTMSTVCNYPC-----EQETMEYNHMLQAYV 241
           K+K    E  GA+ F T    P   +  Q   S +  + C     +   ++ NH    + 
Sbjct: 384 KRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKIDGFKCFTKKMDDSALQLNHTANEFA 443

Query: 242 VSTQKVYRNQYSKQGQNF 295
                 ++ +Y K GQ+F
Sbjct: 444 RKQVTGFKKEYQKVGQSF 461

>BBX_MOUSE (Q8VBW5) HMG box transcription factor BBX (Bobby sox homolog) (HMG|
           box-containing protein 2)
          Length = 907

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 47  TNNEPEEVDKKKKTSATERHG 109
           T N+PE++ KKKK +  +RHG
Sbjct: 441 TLNKPEKIKKKKKKNKLDRHG 461

>BBX_HUMAN (Q8WY36) HMG box transcription factor BBX (Bobby sox homolog) (HMG|
           box-containing protein 2)
          Length = 941

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 53  NEPEEVDKKKKTSATERHG 109
           N+PE++ KKKK S  +RHG
Sbjct: 445 NKPEKLKKKKKKSKMDRHG 463

>YMX8_YEAST (Q04301) Hypothetical transport protein YMR088C|
          Length = 562

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
 Frame = +3

Query: 132 WWGLIYIY-----STNAPCLLCATIL-----VSKKQWSIITCYRHMW 242
           WW LIY++     S    CLL AT++     V K Q   +T   ++W
Sbjct: 409 WWKLIYVFASVLVSFGYACLLVATLVSIVFTVEKSQQGTMTGVFYLW 455

>WDR35_MOUSE (Q8BND3) WD-repeat protein 35|
          Length = 1181

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 38   KFYTNNEPEEVDKKKKTSATERHGAHLFPTCLVGPNLHIQHQCTMSTVC-NYPCEQETME 214
            + +T + P++  K +  S  E  G    PTC+   +  I++Q  +  VC +Y   QE   
Sbjct: 1111 EIFTKHTPKDNRKSELNSLLEG-GEGKLPTCIATGSPIIEYQFWVCKVCKHYVLAQEISN 1169

Query: 215  YN 220
            YN
Sbjct: 1170 YN 1171

>GATA6_CHICK (P43693) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 387

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 202 RNNGV*SHVTGICGLYTK--GLQKPIFKTRPK 291
           R +G  +++   CGLYTK  GL +P+ K + +
Sbjct: 193 RRDGTGNYLCNACGLYTKMNGLSRPLIKPQKR 224

>HTPX_HELPY (O25582) Probable protease htpX homolog (EC 3.4.24.-)|
          Length = 310

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 44  YTNNEPEEVDKKKKTSATERHGAHLFPT 127
           YTNN+ +E+DK    SA     A +F T
Sbjct: 267 YTNNDYKEIDKNSTRSAAYLFNAEMFST 294

>HTPX_HELPJ (Q9ZKS4) Probable protease htpX homolog (EC 3.4.24.-)|
          Length = 310

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 44  YTNNEPEEVDKKKKTSATERHGAHLFPT 127
           YTNN+ +E+DK    SA     A +F T
Sbjct: 267 YTNNDYKEIDKNSTRSAAYLFNAEMFST 294

>YX03_CAEEL (Q11110) Hypothetical protein C03B1.3|
          Length = 115

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 204 SCSQG*LHTVDMVHWCCICKLGPTRQV 124
           SC+ G +H     HW C C + P  QV
Sbjct: 67  SCASGEVH----YHWACFCGVSPNLQV 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,813,194
Number of Sequences: 219361
Number of extensions: 881931
Number of successful extensions: 1846
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)