>SRB8_YEAST (P25648) Suppressor of RNA polymerase B SRB8|
          Length = 1427

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 348  AMEILLMICFICLQFKNNLDVLRKLYDKLK-FGSDTTITWILQKDRCMIHFENNRCKVQN 172
            AME L    F  ++  N+ D+  +++D+LK   +   IT I++KD C    +NN  K+ +
Sbjct: 1109 AMEDLKNFIFQIIEITNSNDLCSQIFDQLKDMQTIEMITQIVEKDFCTSCLQNNNQKIDD 1168

>ZIPA_PHOLL (Q7N6Y5) Cell division protein zipA homolog|
          Length = 303

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 184 TPVVFKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           T V F     SIF+  PSYG  +  F+L++Q ++ I
Sbjct: 232 TMVDFTTPGVSIFMMVPSYGESSQNFKLMLQAAQRI 267

>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein|
           5.5) (Ultrahigh sulfur keratin-associated protein 5.5)
           (Keratin-associated protein 5-11) (Keratin-associated
           protein 5.11)
          Length = 221

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 132 CFLFDDCYCSCCMHFELYTCCFQNGSCIYLSAKSKL 239
           C  F  C  SCC       CC Q+  C+ +  + K+
Sbjct: 186 CSCFSGCGSSCCQSSCYKPCCCQSSCCVPVCCQCKI 221

>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 261 FTTPGVTIFMQVPSYGDALQNFKLMLQSAQHI 292

>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 261 FTTPGVTIFMQVPSYGDALQNFKLMLQSAQHI 292

>PAR1_CRILO (Q00991) Proteinase-activated receptor 1 precursor (PAR-1)|
           (Thrombin receptor)
          Length = 428

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 24/86 (27%), Positives = 42/86 (48%)
 Frame = +1

Query: 1   KSLKLTLDFECRFILFEGLGNVMVFLHHRCLGY*TMCVKQSMAYASCLMIATVVAACILN 180
           ++L L+    C FI+  G  NV++ +H+  L       K   AY  C+ +++ V+ CI  
Sbjct: 313 RALFLSAAVFCVFIVCFGPTNVLLIMHYLLLSDSPATEKAYFAYLLCVCVSS-VSCCI-- 369

Query: 181 FTPVVFKMDHASIFLQNPSYGSVTSK 258
             P+++   +AS   Q   YG +  K
Sbjct: 370 -DPLIYY--YASSECQRHLYGILCCK 392

>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC|
           2.7.11.1)
          Length = 817

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 13  LTLDFECRFILFEGLGNVMVFLHHRCLGY*TMC 111
           + LD+E RF +  G+   + +LHH CL +   C
Sbjct: 625 ILLDWEGRFNIALGVAKGLAYLHHECLEWVIHC 657

>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog|
          Length = 332

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 265 FTTPGVTIFMQVPSYGDELQNFKLMLQSAQHI 296

>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 260 FTTPGVTIFMQVPSYGDELQNFKLMLQSAQHI 291

>ZIPA_ECOLI (P77173) Cell division protein zipA|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 261 FTTPGVTIFMQVPSYGDELQNFKLMLQSAQHI 292

>ZIPA_ECO57 (Q8X492) Cell division protein zipA homolog|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     +IF+Q PSYG     F+L++Q +++I
Sbjct: 261 FTTPGVTIFMQVPSYGDELQNFKLMLQSAQHI 292

>ZIPA_ERWCT (Q6D8S6) Cell division protein zipA homolog|
          Length = 332

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 196 FKMDHASIFLQNPSYGSVTSKFQLIIQLSENI 291
           F     SIF+  PSYG     F+L++Q ++ I
Sbjct: 265 FSTPGVSIFMMVPSYGDAGQNFKLMLQSAQRI 296

>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)|
          Length = 462

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
 Frame = +3

Query: 105 YVC*TKHGICFLFDD---CYCSCCMHFELYTCCFQNGSC 212
           Y C   +  C LF+    C+   C   E  TCC  N SC
Sbjct: 379 YTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSC 417

>AT2A3_CHICK (Q9YGL9) Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (EC|
           3.6.3.8) (Calcium pump 3) (SERCA3) (SR Ca(2+)-ATPase 3)
           (ChkSERCA3)
          Length = 1042

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = -2

Query: 336 LLMICFICLQFKNNLDVLRKLYDKLKFGSDTTITWILQKDRCMIHFENNRCKVQ--NACS 163
           L  IC +C     + +  +K+Y+K+   ++T +T +++K        +   KV+  NAC 
Sbjct: 413 LATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFDTDTSKLSKVERANAC- 471

Query: 162 NYSSNHQTRSICHALFN 112
           N    H  R  C   F+
Sbjct: 472 NSVIKHLMRKECTLEFS 488

>RBD2_CANGA (Q6FSG0) Rhomboid protein 2 (EC 3.4.21.-)|
          Length = 266

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +1

Query: 106 MCVKQSMAYASCLM---IATVVAACILNFTPVVFKMDHASIFLQNPSYG 243
           +CVK+S  Y    +   I  V  +    FTPVVF +  A +F Q+   G
Sbjct: 136 LCVKESQLYPRLELSRFIPGVTQSIPTQFTPVVFLLFTAIVFFQSSFLG 184

>DNJC5_RAT (P60905) DnaJ homolog subfamily C member 5 (Cysteine string|
           protein) (CSP)
          Length = 198

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 129 ICFLFDDCYCSCCMHFELYTCCF 197
           +C L   CYC CC+      CCF
Sbjct: 112 VCGLLTCCYCCCCL-----CCCF 129

>DNJC5_MOUSE (P60904) DnaJ homolog subfamily C member 5 (Cysteine string|
           protein) (CSP)
          Length = 198

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 129 ICFLFDDCYCSCCMHFELYTCCF 197
           +C L   CYC CC+      CCF
Sbjct: 112 VCGLLTCCYCCCCL-----CCCF 129

>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 330

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 258 FGSDTTITWILQKDRCMIHFENNRCKVQNACSNYSSNH 145
           FG+  T TWI+   R M  F+ ++ K+    +N   NH
Sbjct: 235 FGAKKT-TWIVDISRNMFQFDLSKVKLAKTLNNLDMNH 271

>NXF1_COTJA (P58797) Nuclear RNA export factor 1 (Tip-associating protein)|
           (Tip-associated protein) (mRNA export factor TAP)
          Length = 616

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 130 YASCLMIATVVAACILNFTPVVFKMDH--ASIFLQNPSYGSVTSKFQLIIQLSENIQVIL 303
           Y    +++++   C + FTPV F  DH  A  ++++ +  S   +    I   +N +V++
Sbjct: 127 YDKTWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVI 186

>CSP_XENLA (O42196) Cysteine string protein (CSP) (Xcsp)|
          Length = 197

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 132 CFLFDDCYCSCCMHFELYTCCFQNGSC 212
           C L   CYC CC+      CC  N  C
Sbjct: 113 CGLITGCYCCCCL------CCCCNCCC 133

>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein|
           5.6) (Ultrahigh sulfur keratin-associated protein 5.6)
          Length = 129

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +3

Query: 132 CFLFDDCYCSCCMHFELYTCCFQNGSCIYLSAKSKL 239
           C+    C  SCC       CC Q   C+ +  + K+
Sbjct: 94  CYCSSGCGSSCCQSSCCKPCCSQASCCVPICCQCKI 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,283,709
Number of Sequences: 219361
Number of extensions: 846257
Number of successful extensions: 2091
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2090
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)