Clone Name | rbastl45e07 |
---|---|
Clone Library Name | barley_pub |
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 38.1 bits (87), Expect = 0.009 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 416 CGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNFG-DPCRGVTKSLVVEAACS 252 CG++ G C + ++ ++ + +NFG DPCR V K L VEA CS Sbjct: 780 CGNFQQGSCHAPRSYDAFKKNCVGKESCSVQVTPENFGGDPCRNVLKKLSVEAICS 835
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 35.0 bits (79), Expect = 0.072 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Frame = -2 Query: 419 TCGSYSHGECSSSQALAVAQEAXXXXXXXXXXXSAKNF------GDPCRGVTKSLVVEAA 258 TCGS+S G C + ++ ++ + N GDPC G K L VEA Sbjct: 771 TCGSFSEGSCHAHKSYDAFEQEGLMQNCVGQEFCSVNVAPEVFGGDPCPGTMKKLAVEAI 830 Query: 257 C 255 C Sbjct: 831 C 831
>LEG_ANTCR (P22031) D-galactoside-specific lectin (Sea urchin egg lectin)| (SUEL) Length = 105 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -2 Query: 395 ECSSSQALAVAQEAXXXXXXXXXXXSAKNFGDPCRGVTKSLVVEAACS 252 +C SS + V + + S FGDPC G K L V CS Sbjct: 56 KCRSSNSQQVVENSCEGKSSCTVLASNSVFGDPCPGTAKYLAVTYICS 103
>TRFR_RAT (Q01717) Thyrotropin-releasing hormone receptor (TRH-R)| (Thyroliberin receptor) Length = 412 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/57 (28%), Positives = 32/57 (56%) Frame = +2 Query: 95 FTSLHCSNRFWSILFHRTSIAGTIIVSCLFVYKEEESGFAPSFLLTTFMKHVMSMQL 265 FTS++C F+ + + ++ I++SC YK + ++P +L+ + +VM M L Sbjct: 152 FTSIYCMLWFFLLDLNISTYKDAIVISC--GYKISRNYYSPIYLMDFGVFYVMPMIL 206
>HEM4_BACSU (P21248) Uroporphyrinogen-III synthase (EC 4.2.1.75) (UROS)| (Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane hydrolyase [cyclizing]) Length = 262 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 202 IWFRPLLPTNNIYETCHEHAASTTRLFVTPLHGSPKFFADTGTLQLLTPTH 354 I FR LP N++ E E A+ L T ++G+ FF+ QL+ P H Sbjct: 41 ITFRRALP-NDVAEQVREDLAAPGWLVFTSVNGADFFFSYLKENQLILPAH 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,124,751 Number of Sequences: 219361 Number of extensions: 1049096 Number of successful extensions: 1946 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1940 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)