ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017729.1| Zea mays clone EL01N0447H11.c mRNA sequence 115 1e-22
2gb|AY109701.1| Zea mays CL33539_1 mRNA sequence 115 1e-22
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
4dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic D... 100 7e-18
5dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
6ref|NM_191124.1| Oryza sativa (japonica cultivar-group), predic... 94 4e-16
7gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete seq... 48 0.023
8gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete seq... 48 0.023
9gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, co... 44 0.36
10gb|AY747628.1| Rattus norvegicus Ly49 stimulatory receptor 3 var... 42 1.4
11ref|NM_153726.1| Rattus norvegicus Ly-49 stimulatory receptor 3 ... 42 1.4
12gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein... 42 1.4
13emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on ch... 42 1.4
14gb|AY102036.1| Rattus norvegicus Ly49 stimulatory receptor 3 (Ly... 42 1.4
15gb|AC138200.10| Mus musculus chromosome 3, clone RP23-438J19, co... 42 1.4
16gb|DQ214151.1| Taeniopygia guttata clone 0061P0030A03 NADH dehyd... 40 5.6
17ref|XM_518625.1| PREDICTED: Pan troglodytes zinc finger protein ... 40 5.6
18ref|XM_472789.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
19gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, comp... 40 5.6
20gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, com... 40 5.6
21gb|AC144697.3| Felis catus clone RP86-93L22, complete sequence 40 5.6
22gb|AC161037.3| Mus musculus chromosome 7, clone RP24-255H18, com... 40 5.6
23emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chr... 40 5.6
24gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosom... 40 5.6
25gb|AC112651.4| Homo sapiens X BAC RP13-302M16 (Roswell Park Canc... 40 5.6
26dbj|AB204923.1| Gryllus bimaculatus satellite DNA, clone: pUGBH-27 40 5.6
27dbj|AK127835.1| Homo sapiens cDNA FLJ45938 fis, clone PLACE70051... 40 5.6
28ref|XM_938563.1| PREDICTED: Homo sapiens zinc finger protein 292... 40 5.6
29ref|XM_048070.5| PREDICTED: Homo sapiens zinc finger protein 292... 40 5.6
30gb|BC016386.1|BC016386 Homo sapiens, clone IMAGE:4720111, mRNA 40 5.6
31gb|DQ311345.1| Bombyx mori chromatin modifying protein 1b mRNA, ... 40 5.6
32emb|BX649440.3| Zebrafish DNA sequence from clone CH211-198M12 i... 40 5.6
33emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in ... 40 5.6
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
35emb|BX537746.1|HSM805829 Homo sapiens mRNA; cDNA DKFZp686P0262 (... 40 5.6
36emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4,... 40 5.6
37emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-7... 40 5.6
38emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chro... 40 5.6
39gb|DQ063336.1| Alligator mississippiensis Chompy miniature inver... 40 5.6
40emb|AL832366.1|HSM803674 Homo sapiens mRNA; cDNA DKFZp451P076 (f... 40 5.6
41dbj|AB011102.1| Homo sapiens mRNA for KIAA0530 protein, partial cds 40 5.6 
>gb|BT017729.1| Zea mays clone EL01N0447H11.c mRNA sequence
          Length = 981

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Minus

                                                                       
Query: 323 tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 382
           ||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||
Sbjct: 619 tgtttaccagtagtctttgcaagaacacacaccattttcgaagtggtggaacctctttgc 560

                                         
Query: 383 gtccctcgcaatgatctgacggccaacaag 412
            ||||| |||||||||||||| ||||||||
Sbjct: 559 atcccttgcaatgatctgacgtccaacaag 530
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>gb|AY109701.1| Zea mays CL33539_1 mRNA sequence
          Length = 589

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                       
Query: 323 tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 382
           ||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||
Sbjct: 341 tgtttaccagtagtctttgcaagaacacacaccattttcgaagtggtggaacctctttgc 400

                                         
Query: 383 gtccctcgcaatgatctgacggccaacaag 412
            ||||| |||||||||||||| ||||||||
Sbjct: 401 atcccttgcaatgatctgacgtccaacaag 430
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                            
Query: 323      tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 382
                ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 30775678 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 30775619

                                                      
Query: 383      gtccctcgcaatgatctgacggccaacaagcttagaga 420
                 ||||| |||||||||  ||| ||||| || |||||||
Sbjct: 30775618 atcccttgcaatgatcaaacgaccaacgagtttagaga 30775581
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>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                         
Query: 323   tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 382
             ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 64953 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 64894

                                                   
Query: 383   gtccctcgcaatgatctgacggccaacaagcttagaga 420
              ||||| |||||||||  ||| ||||| || |||||||
Sbjct: 64893 atcccttgcaatgatcaaacgaccaacgagtttagaga 64856
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>dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130A18, full
            insert sequence
          Length = 2854

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                        
Query: 323  tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 382
            ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 2548 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 2489

                                                  
Query: 383  gtccctcgcaatgatctgacggccaacaagcttagaga 420
             ||||| |||||||||  ||| ||||| || |||||||
Sbjct: 2488 atcccttgcaatgatcaaacgaccaacgagtttagaga 2451
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>ref|NM_191124.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2391

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 326  ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgcgtc 385
            |||||||||||||||||||||||| | |||||| ||||||||||| || |||||||| ||
Sbjct: 2391 ttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgcatc 2332

                                               
Query: 386  cctcgcaatgatctgacggccaacaagcttagaga 420
            ||| |||||||||  ||| ||||| || |||||||
Sbjct: 2331 ccttgcaatgatcaaacgaccaacgagtttagaga 2297
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>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence
          Length = 115348

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 326   ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaa 373
             ||||||| ||||| | ||||||||||||||||| |  |||||||||||
Sbjct: 17180 ttaccaaaagtctctacaagagcacaaaccattcttgaaatggtggaa 17133
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>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence
          Length = 139792

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 326   ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaa 373
             ||||||| ||||| | ||||||||||||||||| |  |||||||||||
Sbjct: 67915 ttaccaaaagtctctacaagagcacaaaccattcttgaaatggtggaa 67962
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>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence
          Length = 29585

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 328   accaatagtctttgcaagagca 349
             ||||||||||||||||||||||
Sbjct: 19307 accaatagtctttgcaagagca 19328
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>gb|AY747628.1| Rattus norvegicus Ly49 stimulatory receptor 3 variant (Ly49s3)
           mRNA, complete cds, alternatively spliced
          Length = 1465

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 30  catgaactacagaatactcacaaac 54
           |||||||||||||| ||||||||||
Sbjct: 405 catgaactacagaaaactcacaaac 429
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>ref|NM_153726.1| Rattus norvegicus Ly-49 stimulatory receptor 3 (Ly49s3), mRNA
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 30  catgaactacagaatactcacaaac 54
           |||||||||||||| ||||||||||
Sbjct: 354 catgaactacagaaaactcacaaac 378
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>gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1
            (CTNNAL1) gene, complete cds
          Length = 74429

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 349  acaaaccattttcaaaatggt 369
            |||||||||||||||||||||
Sbjct: 6896 acaaaccattttcaaaatggt 6876
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>emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on chromosome 9q31.3-33.2
              Contains the 5' end of the IKBKAP gene encoding inhibitor
              of kappa light polypeptide gene enhancer in B-cells (kinase
              complex-associated protein (IKAP)), the C9orf6 gene for
              chromosome 9 open reading frame 6, the 5' end of the C9orf5
              gene for chromosome 9 open reading frame 5, the 3' end of
              the CTNNAL1 gene encoding Catenin (cadherin-associated
              protein) alpha-like 1, and two CpG islands, complete
              sequence
          Length = 188134

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 349    acaaaccattttcaaaatggt 369
              |||||||||||||||||||||
Sbjct: 104003 acaaaccattttcaaaatggt 104023
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>gb|AY102036.1| Rattus norvegicus Ly49 stimulatory receptor 3 (Ly49s3) mRNA,
           complete cds
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 30  catgaactacagaatactcacaaac 54
           |||||||||||||| ||||||||||
Sbjct: 354 catgaactacagaaaactcacaaac 378
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>gb|AC138200.10| Mus musculus chromosome 3, clone RP23-438J19, complete sequence
          Length = 183803

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     aacaagcatgaactacagaat 44
              |||||||||||||||||||||
Sbjct: 119717 aacaagcatgaactacagaat 119737
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>gb|DQ214151.1| Taeniopygia guttata clone 0061P0030A03 NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex 5-like mRNA, complete
           sequence
          Length = 450

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 356 attttcaaaatggtggaacctctt 379
           ||||||||||||||| ||||||||
Sbjct: 371 attttcaaaatggtgtaacctctt 394
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>ref|XM_518625.1| PREDICTED: Pan troglodytes zinc finger protein 292 (LOC462870), mRNA
          Length = 8202

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 3537 agagcacaaaccattttcaa 3518
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>ref|XM_472789.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 cacaaaccattttcaaaatg 367
           ||||||||||||||||||||
Sbjct: 941 cacaaaccattttcaaaatg 922
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>gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, complete sequence
          Length = 170784

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 143   aacaaattccagactagaacactaatag 170
             |||||||||| ||||||||||| |||||
Sbjct: 65528 aacaaattcctgactagaacaccaatag 65555
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>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   accattttcaaaatggtgga 372
             ||||||||||||||||||||
Sbjct: 88042 accattttcaaaatggtgga 88023
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>gb|AC144697.3| Felis catus clone RP86-93L22, complete sequence
          Length = 39827

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     actttagcacactcaaagtt 20
             ||||||||||||||||||||
Sbjct: 26485 actttagcacactcaaagtt 26504
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>gb|AC161037.3| Mus musculus chromosome 7, clone RP24-255H18, complete sequence
          Length = 184362

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 143   aacaaattccagactagaacactaatag 170
             |||||||||| ||||||||||| |||||
Sbjct: 13877 aacaaattcctgactagaacaccaatag 13850
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>emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chromosome 6 Contains a
              reticulocalbin 1, EF-hand calcium binding domain (RCN1)
              pseudogene, a novel gene, a novel pseudogene, the gene for
              a novel zinc finger protein (C2H2 type) and 3 CpG islands,
              complete sequence
          Length = 163481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    agagcacaaaccattttcaa 363
              ||||||||||||||||||||
Sbjct: 138629 agagcacaaaccattttcaa 138610
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>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence
          Length = 187225

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ttaaaccaaatgtttcatag 241
              ||||||||||||||||||||
Sbjct: 143215 ttaaaccaaatgtttcatag 143196
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>gb|AC112651.4| Homo sapiens X BAC RP13-302M16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159274

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 287   tattaaatttgataacagtgtaga 310
             ||||||||||||||| ||||||||
Sbjct: 98787 tattaaatttgataatagtgtaga 98810
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>dbj|AB204923.1| Gryllus bimaculatus satellite DNA, clone: pUGBH-27
          Length = 539

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tttatgacatgtaacgaatt 105
           ||||||||||||||||||||
Sbjct: 208 tttatgacatgtaacgaatt 227
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>dbj|AK127835.1| Homo sapiens cDNA FLJ45938 fis, clone PLACE7005169, moderately
            similar to Mus musculus zinc finger protein 292 (Zfp292)
          Length = 4050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 3551 agagcacaaaccattttcaa 3532
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>ref|XM_938563.1| PREDICTED: Homo sapiens zinc finger protein 292, transcript variant 4
            (ZNF292), mRNA
          Length = 10571

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 4768 agagcacaaaccattttcaa 4749
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>ref|XM_048070.5| PREDICTED: Homo sapiens zinc finger protein 292, transcript variant 1
            (ZNF292), mRNA
          Length = 10571

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 4768 agagcacaaaccattttcaa 4749
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>gb|BC016386.1|BC016386 Homo sapiens, clone IMAGE:4720111, mRNA
          Length = 1892

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 agagcacaaaccattttcaa 363
           ||||||||||||||||||||
Sbjct: 675 agagcacaaaccattttcaa 656
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>gb|DQ311345.1| Bombyx mori chromatin modifying protein 1b mRNA, complete cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  aaacctgtggttaaaccaaa 231
            ||||||||||||||||||||
Sbjct: 1318 aaacctgtggttaaaccaaa 1299
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>emb|BX649440.3| Zebrafish DNA sequence from clone CH211-198M12 in linkage group 3,
            complete sequence
          Length = 29954

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   gtgtatccatagtttgtatc 77
            ||||||||||||||||||||
Sbjct: 5522 gtgtatccatagtttgtatc 5541
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>emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in linkage group 21,
              complete sequence
          Length = 211164

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 346    agcacaaaccattttcaaaatggt 369
              ||||||||||| ||||||||||||
Sbjct: 121521 agcacaaaccaatttcaaaatggt 121498
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      cacaaaccattttcaaaatg 367
                ||||||||||||||||||||
Sbjct: 23249683 cacaaaccattttcaaaatg 23249664
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>emb|BX537746.1|HSM805829 Homo sapiens mRNA; cDNA DKFZp686P0262 (from clone DKFZp686P0262)
          Length = 7037

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 4773 agagcacaaaccattttcaa 4754
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>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02,
             complete sequence
          Length = 121337

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cacaaaccattttcaaaatg 367
             ||||||||||||||||||||
Sbjct: 87836 cacaaaccattttcaaaatg 87817
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>emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-725G5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195835

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tccttgacatgaaacctgtg 220
             ||||||||||||||||||||
Sbjct: 34187 tccttgacatgaaacctgtg 34168
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>emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chromosome X, complete
             sequence
          Length = 238677

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cacaaaccattttcaaaatg 367
             ||||||||||||||||||||
Sbjct: 54225 cacaaaccattttcaaaatg 54206
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>gb|DQ063336.1| Alligator mississippiensis Chompy miniature inverted-repeat
           transposable element, partial sequence
          Length = 466

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 349 acaaaccattttcaaaatggtggaacct 376
           |||||||| ||| |||||||||||||||
Sbjct: 85  acaaaccaatttaaaaatggtggaacct 112
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>emb|AL832366.1|HSM803674 Homo sapiens mRNA; cDNA DKFZp451P076 (from clone DKFZp451P076)
          Length = 4586

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 3069 agagcacaaaccattttcaa 3050
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>dbj|AB011102.1| Homo sapiens mRNA for KIAA0530 protein, partial cds
          Length = 6578

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agagcacaaaccattttcaa 363
            ||||||||||||||||||||
Sbjct: 1279 agagcacaaaccattttcaa 1260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,723,903
Number of Sequences: 3902068
Number of extensions: 3723903
Number of successful extensions: 69463
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69360
Number of HSP's gapped (non-prelim): 103
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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