ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNF21_MOUSE (Q6P560) Zinc finger protein 21 31 1.8
2ZG28_XENLA (P18716) Gastrula zinc finger protein XLCGF28.1 (Frag... 30 3.0
3ZN441_HUMAN (Q8N8Z8) Zinc finger protein 441 30 3.9
4ZSCA2_HUMAN (Q7Z7L9) Zinc finger and SCAN domain-containing prot... 30 3.9
5ZN256_HUMAN (Q9Y2P7) Zinc finger protein 256 (Bone marrow zinc f... 29 6.7
6ZN567_HUMAN (Q8N184) Zinc finger protein 567 29 6.7
7SELI_PONPY (Q5NV96) Selenoprotein I 29 6.7
8SELI_HUMAN (Q9C0D9) Selenoprotein I 29 6.7

>ZNF21_MOUSE (Q6P560) Zinc finger protein 21|
          Length = 627

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 286 VHCRALIGVRSVRCSECALCHDEKFQFLVFIRSYT 182
           VH R   G +   CSEC     +K Q ++ +R++T
Sbjct: 252 VHWRTHTGEKPFECSECGKAFSQKSQLIIHLRTHT 286



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>ZG28_XENLA (P18716) Gastrula zinc finger protein XLCGF28.1 (Fragment)|
          Length = 252

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -2

Query: 286 VHCRALIGVRSVRCSECALCHDEKFQFLVFIRSYTSS--FLFLNCLYEF*CNQFRNV 122
           +H R+  G +S  C+ C        QF V +RS+T    F    C   F CN   N+
Sbjct: 79  IHIRSHTGDKSYTCTVCGKIFTRISQFNVHVRSHTGEKPFKCTECGKSFICNSQLNL 135



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>ZN441_HUMAN (Q8N8Z8) Zinc finger protein 441|
          Length = 626

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
 Frame = -2

Query: 427 DLSRSISDLQCWFRLDLLRDDSEHKHLEKIILGSTNWRHSEC*MV------PEVHCRALI 266
           D+    S L C+ R+D     SEHK  E    G   + H++C          ++H R   
Sbjct: 43  DVLMGRSSLNCYIRVD-----SEHKPYEYQEYGEKPYTHTQCGTAFSYQPCFQIHERPQH 97

Query: 265 GVRSVRCSECA 233
           G +   C ECA
Sbjct: 98  GKKLYDCKECA 108



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>ZSCA2_HUMAN (Q7Z7L9) Zinc finger and SCAN domain-containing protein 2 (Zinc|
           finger protein 29 homolog) (Zfp-29)
          Length = 613

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 283 HCRALIGVRSVRCSECALCHDEKFQFLVFIRSYT 182
           H R   G +  +CSEC  C  ++ Q +V  R++T
Sbjct: 491 HQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHT 524



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>ZN256_HUMAN (Q9Y2P7) Zinc finger protein 256 (Bone marrow zinc finger 3)|
           (BMZF-3)
          Length = 474

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 283 HCRALIGVRSVRCSECALCHDEKFQFLVFIRSYT 182
           H R   GVRS  C EC      KF  +V  R +T
Sbjct: 272 HQRVHTGVRSHECHECGKLFSRKFDLIVHERVHT 305



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>ZN567_HUMAN (Q8N184) Zinc finger protein 567|
          Length = 616

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 283 HCRALIGVRSVRCSECALCHDEKFQFLVFIRSYT 182
           H R   G +  +CSEC  C  +K   +V  R++T
Sbjct: 548 HQRTHTGEKPYKCSECGKCFRQKTNLIVHQRTHT 581



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>SELI_PONPY (Q5NV96) Selenoprotein I|
          Length = 397

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 238 CALCHDEKFQFLVFIRSYTSSFLFLNCLYE 149
           CALC       L F RSY ++ L LN +YE
Sbjct: 229 CALCVTLPMSLLNFFRSYKNNTLKLNSVYE 258



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>SELI_HUMAN (Q9C0D9) Selenoprotein I|
          Length = 397

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 238 CALCHDEKFQFLVFIRSYTSSFLFLNCLYE 149
           CALC       L F RSY ++ L LN +YE
Sbjct: 229 CALCVTLPMSLLNFFRSYKNNTLKLNSVYE 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,624,850
Number of Sequences: 219361
Number of extensions: 1089816
Number of successful extensions: 2651
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2651
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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