ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
2dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
3dbj|AK073183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
4emb|BX322635.6| Human DNA sequence from clone RP1-290F12 on chro... 46 0.10
5emb|AL808104.14| Mouse DNA sequence from clone RP23-30M20 on chr... 46 0.10
6gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, c... 44 0.40
7emb|CR626939.5| Zebrafish DNA sequence from clone DKEY-73E3 in l... 44 0.40
8emb|BX908389.7| Zebrafish DNA sequence from clone DKEY-98G7 in l... 44 0.40
9emb|BX927249.5| Zebrafish DNA sequence from clone CH211-273E21 i... 44 0.40
10gb|AE014175.1| Mus musculus piebald deletion region section 3 of... 44 0.40
11emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in ... 44 0.40
12emb|BX511108.6| Zebrafish DNA sequence from clone DKEY-18F15 in ... 44 0.40
13emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 i... 44 0.40
14emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 ... 44 0.40
15emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 i... 44 0.40
16gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, com... 44 0.40
17gb|DP000004.1| Lemur catta target 1 genomic scaffold 42 1.6
18gb|AC123971.3| Lemur catta clone LB2-255J23, complete sequence 42 1.6
19dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.6
20emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 i... 42 1.6
21emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 i... 42 1.6
22gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.2
23gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, com... 40 6.2
24gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence 40 6.2
25gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chrom... 40 6.2
26gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete s... 40 6.2
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
28emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, ... 40 6.2
29gb|AC144868.2| Xenopus tropicalis clone ISB-379D13, complete seq... 40 6.2
30gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome... 40 6.2
31gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
32gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequ... 40 6.2
33emb|AL136123.19| Human DNA sequence from clone RP11-236M15 on ch... 40 6.2
34emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P1... 40 6.2
35emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in l... 40 6.2
36emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 ... 40 6.2
37emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in... 40 6.2
38emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in ... 40 6.2
39gb|AC114975.2| Homo sapiens chromosome 5 clone RP11-484L7, compl... 40 6.2
40emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 i... 40 6.2
41emb|AL832065.1|HSM803372 Homo sapiens mRNA; cDNA DKFZp313G1618 (... 40 6.2
42gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, com... 40 6.2
43gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, comp... 40 6.2
44gb|AF036695.2| Caenorhabditis elegans cosmid F16B3, complete seq... 40 6.2
45emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in... 40 6.2
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in ... 40 6.2
48gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 40 6.2
49gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
50gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6... 40 6.2
51emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in... 40 6.2
52dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
53dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
55gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, co... 40 6.2
56gb|AC147995.3| Mus musculus BAC clone RP24-294O4 from 8, complet... 40 6.2
57emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 i... 40 6.2
58emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, comple... 40 6.2
59gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromos... 40 6.2
60gb|AC132128.3| Mus musculus BAC clone RP23-409E12 from 8, comple... 40 6.2
61gb|AC149341.2| Phakopsora pachyrhizi clone JGIAFNA-25D19, comple... 40 6.2
62gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, comp... 40 6.2 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                            
Query: 363      ctgtcatctctcagcaagtccaaccggaaccaacattggagatcgctgatgctccgcgaa 422
                ||||||||| || ||||| |||||||| ||  | ||||||||| |||||||||| || ||
Sbjct: 27440084 ctgtcatctatctgcaaggccaaccggcactgatattggagattgctgatgctctgcaaa 27440025

                                           
Query: 423      agatcgaaccccattgctaatgacctt 449
                 ||| |||||||||| |||||||||||
Sbjct: 27440024 cgatggaaccccattcctaatgacctt 27439998



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 50      catcactacacacacaacat 69
               ||||||||||||||||||||
Sbjct: 5509852 catcactacacacacaacat 5509871



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 161     attcagaaaaagaaaagaacttgt 184
               |||||||||||||||| |||||||
Sbjct: 3520761 attcagaaaaagaaaacaacttgt 3520784
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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0657H12
          Length = 142688

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                         
Query: 363   ctgtcatctctcagcaagtccaaccggaaccaacattggagatcgctgatgctccgcgaa 422
             ||||||||| || ||||| |||||||| ||  | ||||||||| |||||||||| || ||
Sbjct: 31806 ctgtcatctatctgcaaggccaaccggcactgatattggagattgctgatgctctgcaaa 31747

                                        
Query: 423   agatcgaaccccattgctaatgacctt 449
              ||| |||||||||| |||||||||||
Sbjct: 31746 cgatggaaccccattcctaatgacctt 31720
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>dbj|AK073183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009O22, full
            insert sequence
          Length = 2735

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                        
Query: 376  gcaagtccaaccggaaccaacattggagatcgctgatgctccgcgaaagatcgaacccca 435
            ||||| |||||||| ||  | ||||||||| |||||||||| || || ||| ||||||||
Sbjct: 2486 gcaaggccaaccggcactgatattggagattgctgatgctctgcaaacgatggaacccca 2427

                          
Query: 436  ttgctaatgacctt 449
            || |||||||||||
Sbjct: 2426 ttcctaatgacctt 2413
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>emb|BX322635.6| Human DNA sequence from clone RP1-290F12 on chromosome X Contains the
             gene for super conserved receptor expressed in brain 3
             (SREB3), the gene for cutaneous T-cell lymphoma-associated
             tumor antigen se20-4 (SE20-4) and two CpG islands,
             complete sequence
          Length = 66325

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 158   acaattcagaaaaagaaaagaac 180
             |||||||||||||||||||||||
Sbjct: 52150 acaattcagaaaaagaaaagaac 52172
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>emb|AL808104.14| Mouse DNA sequence from clone RP23-30M20 on chromosome 2, complete
             sequence
          Length = 199494

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 53    cactacacacacaacatataacgtaca 79
             |||||||||||| ||||||||||||||
Sbjct: 96460 cactacacacaccacatataacgtaca 96434
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>gb|AC114585.19| Mus musculus chromosome 14, clone RP23-296J16, complete sequence
          Length = 192819

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 156   aaacaattcagaaaaagaaaagaacttgta 185
             ||||||||| |||||| |||||||||||||
Sbjct: 21768 aaacaattctgaaaaacaaaagaacttgta 21797
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>emb|CR626939.5| Zebrafish DNA sequence from clone DKEY-73E3 in linkage group 14,
             complete sequence
          Length = 66438

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 156   aaacaattcagaaaaagaaaag 177
             ||||||||||||||||||||||
Sbjct: 30933 aaacaattcagaaaaagaaaag 30954
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>emb|BX908389.7| Zebrafish DNA sequence from clone DKEY-98G7 in linkage group 14,
             complete sequence
          Length = 172795

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 156   aaacaattcagaaaaagaaaag 177
             ||||||||||||||||||||||
Sbjct: 96333 aaacaattcagaaaaagaaaag 96312
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>emb|BX927249.5| Zebrafish DNA sequence from clone CH211-273E21 in linkage group 5,
             complete sequence
          Length = 54421

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 156   aaacaattcagaaaaagaaaag 177
             ||||||||||||||||||||||
Sbjct: 14671 aaacaattcagaaaaagaaaag 14692
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>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
              sequence
          Length = 404829

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 156    aaacaattcagaaaaagaaaagaacttgta 185
              ||||||||| |||||| |||||||||||||
Sbjct: 315767 aaacaattctgaaaaacaaaagaacttgta 315796
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>emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in linkage group 14,
             complete sequence
          Length = 163842

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 156   aaacaattcagaaaaagaaaag 177
             ||||||||||||||||||||||
Sbjct: 92762 aaacaattcagaaaaagaaaag 92741
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>emb|BX511108.6| Zebrafish DNA sequence from clone DKEY-18F15 in linkage group 11,
              complete sequence
          Length = 139640

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 156    aaacaattcagaaaaagaaaag 177
              ||||||||||||||||||||||
Sbjct: 127210 aaacaattcagaaaaagaaaag 127231
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>emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 in linkage group 7,
              complete sequence
          Length = 179095

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 156    aaacaattcagaaaaagaaaag 177
              ||||||||||||||||||||||
Sbjct: 106006 aaacaattcagaaaaagaaaag 106027
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>emb|BX537115.11| Zebrafish DNA sequence from clone CH211-207B20 in linkage group 14,
              complete sequence
          Length = 192331

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 156    aaacaattcagaaaaagaaaag 177
              ||||||||||||||||||||||
Sbjct: 101622 aaacaattcagaaaaagaaaag 101601
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>emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 in linkage group 1,
             complete sequence
          Length = 196036

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 156   aaacaattcagaaaaagaaaag 177
             ||||||||||||||||||||||
Sbjct: 12979 aaacaattcagaaaaagaaaag 12958
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>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence
          Length = 201783

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 156    aaacaattcagaaaaagaaaagaacttgta 185
              ||||||||| |||||| |||||||||||||
Sbjct: 187512 aaacaattctgaaaaacaaaagaacttgta 187541
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>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 57      acacacacaacatataacgtacatt 81
               ||||||||||||||| |||||||||
Sbjct: 1362736 acacacacaacatattacgtacatt 1362760
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>gb|AC123971.3| Lemur catta clone LB2-255J23, complete sequence
          Length = 222919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 57     acacacacaacatataacgtacatt 81
              ||||||||||||||| |||||||||
Sbjct: 186293 acacacacaacatattacgtacatt 186317
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>dbj|AB011479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNA5
          Length = 88356

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    caagagttacaattacaaata 106
             |||||||||||||||||||||
Sbjct: 43157 caagagttacaattacaaata 43137
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>emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 in linkage group 20,
             complete sequence
          Length = 130645

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   aaacaattcagaaaaagaaaa 176
             |||||||||||||||||||||
Sbjct: 31497 aaacaattcagaaaaagaaaa 31477
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>emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 in linkage group 22,
             complete sequence
          Length = 149478

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 189   ctcctgataaacactagaaactgaa 213
             |||||||||||||||| ||||||||
Sbjct: 82193 ctcctgataaacactaaaaactgaa 82217
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tacaaacaattcagaaaaag 172
              ||||||||||||||||||||
Sbjct: 469061 tacaaacaattcagaaaaag 469042
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>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence
          Length = 171392

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    aaacaattcagaaaaagaaaagaa 179
              |||||||||||||||| |||||||
Sbjct: 108694 aaacaattcagaaaaataaaagaa 108671
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>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence
          Length = 142376

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cactagaaactgaaactttt 219
             ||||||||||||||||||||
Sbjct: 55809 cactagaaactgaaactttt 55828
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>gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chromosome 6, complete
             sequence
          Length = 207116

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   catctctcagcaagtccaac 386
             ||||||||||||||||||||
Sbjct: 81076 catctctcagcaagtccaac 81095
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>gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gaaaattcagtcatcactac 58
             ||||||||||||||||||||
Sbjct: 55652 gaaaattcagtcatcactac 55633
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 157     aacaattcagaaaaagaaaa 176
               ||||||||||||||||||||
Sbjct: 4923082 aacaattcagaaaaagaaaa 4923063



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     ttcagaaaaagaaaagaact 181
               ||||||||||||||||||||
Sbjct: 4556343 ttcagaaaaagaaaagaact 4556324
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>emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, complete sequence
          Length = 152713

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   acaattcagaaaaagaaaag 177
             ||||||||||||||||||||
Sbjct: 63570 acaattcagaaaaagaaaag 63589
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>gb|AC144868.2| Xenopus tropicalis clone ISB-379D13, complete sequence
          Length = 63594

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gaaaattcagtcatcactac 58
             ||||||||||||||||||||
Sbjct: 47612 gaaaattcagtcatcactac 47593
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>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence
          Length = 220895

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    attcagaaaaagaaaagaac 180
              ||||||||||||||||||||
Sbjct: 140384 attcagaaaaagaaaagaac 140365
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0064E16, complete sequence
          Length = 159092

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   aacaattcagaaaaagaaaa 176
             ||||||||||||||||||||
Sbjct: 72465 aacaattcagaaaaagaaaa 72484
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>gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequence
          Length = 103933

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gaaaattcagtcatcactac 58
             ||||||||||||||||||||
Sbjct: 88923 gaaaattcagtcatcactac 88904
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>emb|AL136123.19| Human DNA sequence from clone RP11-236M15 on chromosome 13 Contains a
             meningioma expressed antigen 6 (coiled-coil proline-rich)
             (MGEA6) pseudogene, the C13orf1 gene for chromosome 13
             open reading frame 1 and a CpG island, complete sequence
          Length = 178151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acacaacatataacgtacat 80
             ||||||||||||||||||||
Sbjct: 81754 acacaacatataacgtacat 81735
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>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2
             Contains the 3' end of the TFEB gene for transcription
             factor EB (TCFEB), a nucleophosmin (nucleolar
             phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI
             gene for MyoD family inhibitor, the 5' end of a novel gene
             and two CpG islands, complete sequence
          Length = 110665

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   catctctcagcaagtccaac 386
             ||||||||||||||||||||
Sbjct: 21406 catctctcagcaagtccaac 21387
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>emb|CR626890.8| Zebrafish DNA sequence from clone DKEY-83J7 in linkage group 15, complete
              sequence
          Length = 211127

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaacaattcagaaaaagaaa 175
              ||||||||||||||||||||
Sbjct: 106019 aaacaattcagaaaaagaaa 106000
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>emb|AL954241.1| Pan troglodytes chromosome 22 clone RP43-181I17 map 22q22.2-q22.3,
             complete sequence
          Length = 212865

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aaaaagaaaagaacttgtat 186
             ||||||||||||||||||||
Sbjct: 87011 aaaaagaaaagaacttgtat 86992
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>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15,
              complete sequence
          Length = 164638

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaacaattcagaaaaagaaa 175
              ||||||||||||||||||||
Sbjct: 155817 aaacaattcagaaaaagaaa 155798
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>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains
              part of the gene for a novel protein similar to vertebrate
              atrophin-1 interacting protein (AIP1) and a CpG island,
              complete sequence
          Length = 263517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaacaattcagaaaaagaaa 175
              ||||||||||||||||||||
Sbjct: 183555 aaacaattcagaaaaagaaa 183536
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>gb|AC114975.2| Homo sapiens chromosome 5 clone RP11-484L7, complete sequence
          Length = 197363

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    catctctcagcaagtccaac 386
              ||||||||||||||||||||
Sbjct: 136268 catctctcagcaagtccaac 136249
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>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15,
             complete sequence
          Length = 182149

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   aaacaattcagaaaaagaaa 175
             ||||||||||||||||||||
Sbjct: 47087 aaacaattcagaaaaagaaa 47068
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>emb|AL832065.1|HSM803372 Homo sapiens mRNA; cDNA DKFZp313G1618 (from clone DKFZp313G1618)
          Length = 6532

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  aacaattcagaaaaagaaaa 176
            ||||||||||||||||||||
Sbjct: 2116 aacaattcagaaaaagaaaa 2097
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>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence
          Length = 171818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  aacaattcagaaaaagaaaa 176
            ||||||||||||||||||||
Sbjct: 2724 aacaattcagaaaaagaaaa 2743
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>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence
          Length = 159519

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   aacaattcagaaaaagaaaa 176
             ||||||||||||||||||||
Sbjct: 69267 aacaattcagaaaaagaaaa 69248
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>gb|AF036695.2| Caenorhabditis elegans cosmid F16B3, complete sequence
          Length = 36818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  aacaattcagaaaaagaaaa 176
            ||||||||||||||||||||
Sbjct: 3199 aacaattcagaaaaagaaaa 3180
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>emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in linkage group 15,
              complete sequence
          Length = 248279

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    caattcagaaaaagaaaaga 178
              ||||||||||||||||||||
Sbjct: 100334 caattcagaaaaagaaaaga 100315
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 157     aacaattcagaaaaagaaaa 176
               ||||||||||||||||||||
Sbjct: 4922297 aacaattcagaaaaagaaaa 4922278



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     ttcagaaaaagaaaagaact 181
               ||||||||||||||||||||
Sbjct: 4556458 ttcagaaaaagaaaagaact 4556439
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>emb|BX005327.9| Zebrafish DNA sequence from clone DKEY-65B16 in linkage group 7,
             complete sequence
          Length = 237129

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cactacacacacaacatata 72
             ||||||||||||||||||||
Sbjct: 64956 cactacacacacaacatata 64937
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>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 58      cacacacaacatataacgtacatt 81
               |||||||||||||| |||||||||
Sbjct: 1429433 cacacacaacatattacgtacatt 1429456
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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17,
              complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ttcagaaaaagaaaagaact 181
              ||||||||||||||||||||
Sbjct: 161635 ttcagaaaaagaaaagaact 161616
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>gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6, complete sequence
          Length = 166525

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   tgtttgtgttcactgtcatctctc 374
             ||||| ||||||||||||||||||
Sbjct: 94422 tgtttttgttcactgtcatctctc 94445
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>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7,
            complete sequence
          Length = 209666

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   cactacacacacaacatata 72
            ||||||||||||||||||||
Sbjct: 9935 cactacacacacaacatata 9916
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>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0026H03
          Length = 151827

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    catcactacacacacaacat 69
             ||||||||||||||||||||
Sbjct: 54587 catcactacacacacaacat 54606
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>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0023I17
          Length = 141852

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   attcagaaaaagaaaagaacttgt 184
             |||||||||||||||| |||||||
Sbjct: 65556 attcagaaaaagaaaacaacttgt 65579
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0085K21
          Length = 180714

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 161  attcagaaaaagaaaagaacttgt 184
            |||||||||||||||| |||||||
Sbjct: 2051 attcagaaaaagaaaacaacttgt 2074
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>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence
          Length = 171133

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   aattcagaaaaagaaaagaa 179
             ||||||||||||||||||||
Sbjct: 72614 aattcagaaaaagaaaagaa 72595
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>gb|AC147995.3| Mus musculus BAC clone RP24-294O4 from 8, complete sequence
          Length = 182583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    aaacaattcagaaaaagaaaagaa 179
              ||||||| ||||||||||||||||
Sbjct: 116577 aaacaatacagaaaaagaaaagaa 116554
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>emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 in linkage group 3,
             complete sequence
          Length = 187523

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   aaacaattcagaaaaagaaa 175
             ||||||||||||||||||||
Sbjct: 42760 aaacaattcagaaaaagaaa 42779
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>emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, complete sequence
          Length = 42042

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   aattcagaaaaagaaaagaa 179
             ||||||||||||||||||||
Sbjct: 19096 aattcagaaaaagaaaagaa 19115
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>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete
             sequence
          Length = 248284

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   atgtttgtgttcactgtcat 369
             ||||||||||||||||||||
Sbjct: 25014 atgtttgtgttcactgtcat 25033
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>gb|AC132128.3| Mus musculus BAC clone RP23-409E12 from 8, complete sequence
          Length = 183872

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   aaacaattcagaaaaagaaaagaa 179
             ||||||| ||||||||||||||||
Sbjct: 26604 aaacaatacagaaaaagaaaagaa 26581
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>gb|AC149341.2| Phakopsora pachyrhizi clone JGIAFNA-25D19, complete sequence
          Length = 38997

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  ataaacactagaaactgaaacttt 218
            |||||||||||| |||||||||||
Sbjct: 1815 ataaacactagagactgaaacttt 1792
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>gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, complete sequence
          Length = 217346

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gagttacaattacaaataag 108
             ||||||||||||||||||||
Sbjct: 23205 gagttacaattacaaataag 23224


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,223,132
Number of Sequences: 3902068
Number of extensions: 5223132
Number of successful extensions: 130505
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130050
Number of HSP's gapped (non-prelim): 455
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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