>PNCB_RHIME (Q92S49) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)|
           (NAPRTase)
          Length = 434

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 201 FILEELTWKGCKHALDDAYIFGPNFVAWLTESILPKPEL 85
           F  +E+ W           IF P F+AWL    LP+ EL
Sbjct: 81  FTKKEMIWLAGNSFYGRTQIFSPEFLAWLARFRLPEYEL 119

>PNCB_RHILO (Q98D24) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)|
           (NAPRTase)
          Length = 434

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 201 FILEELTWKGCKHALDDAYIFGPNFVAWLTESILPKPEL 85
           F  +E+ W G  +      IF P F+AWL    LP  EL
Sbjct: 81  FSKKEMIWLGGNNFYGRKQIFEPEFLAWLEGFRLPDYEL 119

>GLGB_SALTY (Q8ZLG5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 728

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 186 LTWKGCKHALDDAYIFGP---NFVAWLTES---ILPKPELGFH 76
           +TW G ++ +DD Y FGP      AWL      + P   LG H
Sbjct: 86  VTWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLRPYETLGAH 128

>GLGB_SALTI (Q8Z235) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 728

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 186 LTWKGCKHALDDAYIFGP---NFVAWLTES---ILPKPELGFH 76
           +TW G ++ +DD Y FGP      AWL      + P   LG H
Sbjct: 86  VTWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLRPYETLGAH 128

>GLGB_SALPA (Q5PM06) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 728

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -1

Query: 186 LTWKGCKHALDDAYIFGP---NFVAWLTES---ILPKPELGFH 76
           +TW G ++ +DD Y FGP      AWL      + P   LG H
Sbjct: 86  VTWHGQQNLIDDPYRFGPLMQEMDAWLLSEGTHLRPYETLGAH 128

>FREM2_LYTVA (Q9GV77) Extracellular matrix protein 3 precursor (FREM2 homolog)|
          Length = 3103

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 86   SSGLGKMDSVNHATKLGPKMYASSSACLHPFHVSSSKMK-----GPQ 211
            SSG+GK ++ +HA     +  A+S A + P     + MK     GPQ
Sbjct: 2983 SSGIGKRETEHHAISSRQRRQANSEALVDPAQGQGTNMKRVALQGPQ 3029

>PNCB_BRUME (Q8YEP2) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)|
           (NAPRTase)
          Length = 434

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 201 FILEELTWKGCKHALDDAYIFGPNFVAWLTESILPKPEL 85
           F  +E+ W           IF P F+AWL +  LP+ EL
Sbjct: 81  FSKKEMIWLAGNTFYGRKQIFQPEFLAWLHDCQLPEYEL 119

>NEUA_ONCMY (Q90WG6) N-acylneuraminate cytidylyltransferase (EC 2.7.7.43)|
           (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc
           synthetase)
          Length = 432

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +2

Query: 17  LSRTSKESAHMYHAQGLRVK*NPSSGLGKMDSVNHATKLGPKM-----YASSSACLHPFH 181
           + + +K      H +   V  + SS L   D++    +L P++       ++S CLHPFH
Sbjct: 84  IEKVAKTWGAQVHRRSPEVSKDSSSSL---DTIQEFARLNPEVDVICHIQATSPCLHPFH 140

Query: 182 VSSS 193
           +  +
Sbjct: 141 LKEA 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,415,847
Number of Sequences: 219361
Number of extensions: 806992
Number of successful extensions: 1631
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)