>PIVA2_ADECT (P87552) Maturation protein (Protein IVA2)|
          Length = 446

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 300 CLQSLWFLNLMLKSVHVHPLATMFGLLTTVDQVVIS-CTLWEAQVCTGYLCTGVPLLYIP 124
           C +S    NLM   + V    T+F +   VD +       WE Q+C G    G     +P
Sbjct: 174 CGKSQLLRNLMSAQLIVPAPETVFFITPQVDMIPPQEIAAWETQICEGNFLAGPENTVVP 233

Query: 123 FSSSYFAKRVNFRW 82
            S S   K V   +
Sbjct: 234 QSGSIMPKFVQMSY 247

>DDX11_HUMAN (Q96FC9) Probable ATP-dependent RNA helicase DDX11 (EC 3.6.1.-)|
           (DEAD/H box protein 11) (CHL1 homolog) (Keratinocyte
           growth factor-regulated gene 2 protein) (KRG-2)
          Length = 970

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 247 VDMHRFEHEIQKPQTLQTFSGRRQLKPLGCVFTQHVTKKMGLL 375
           VDM R  HE +K    +    RRQ K   C F  H  ++MGLL
Sbjct: 286 VDMQRSRHEKKKGAEEEKPKRRRQEKQAACPFYNH--EQMGLL 326

>UNC93_CAEEL (Q93380) Putative potassium channel regulatory protein unc-93|
           (Uncoordinated protein 93)
          Length = 705

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 25/92 (27%), Positives = 42/92 (45%)
 Frame = -3

Query: 306 RKCLQSLWFLNLMLKSVHVHPLATMFGLLTTVDQVVISCTLWEAQVCTGYLCTGVPLLYI 127
           RK + +LW L     SV    L T F  L  + Q  ++  L    +   YL   +  L++
Sbjct: 244 RKIMSNLWIL-----SVAFLFLFTAFNGLQNL-QTSVNGDLGSDSLVALYLSLAISSLFV 297

Query: 126 PFSSSYFAKRVNFRWTLGVHIYIYQTGVLINL 31
           P   S+   R+  + T  + I++Y   ++INL
Sbjct: 298 P---SFMINRLGCKLTFLIAIFVYFLYIVINL 326

>MAMC2_MOUSE (Q8CG85) MAM domain-containing protein 2 precursor|
          Length = 686

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
 Frame = +1

Query: 103 CKITRRKRNIQQWHSGTQVSCTDLSFPK-----STAYYHLIDCS 219
           C  T+ KRN   WH G   + T  + PK        YY  I+ S
Sbjct: 516 CAFTQEKRNRSSWHRGRGETPTSYTGPKGDHTTGVGYYMYIEAS 559

>PIVA2_ADECR (Q96680) Maturation protein (Protein IVA2)|
          Length = 502

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 300 CLQSLWFLNLMLKSVHVHPLATMFGLLTTVDQVVIS-CTLWEAQVCTGYLCTGVPLLYIP 124
           C +S    NLM   + V    T+F +   VD +       WE Q+C G    G     +P
Sbjct: 230 CGKSQLLRNLMSAQLIVPTPETVFFITPQVDMIPPQEIAAWETQICEGNFLAGPENTVVP 289

Query: 123 FSSSYFAKRVNFRW 82
            S S   + +   +
Sbjct: 290 QSGSIMPRFIQMSY 303

>GTHB2_THUOB (P37206) Gonadotropin beta-2 subunit (Gonadotropin beta-II chain)|
           (GTH-II-beta)
          Length = 115

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 195 SCTLWEAQVCTGYLCTGVPLLYIPFSSSY 109
           SC   E  +C+G+  T  P++ IPFS  Y
Sbjct: 22  SCHPVETTICSGHCITKDPVIKIPFSKVY 50

>PIVA2_ADECC (Q65945) Maturation protein (Protein IVA2)|
          Length = 446

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 300 CLQSLWFLNLMLKSVHVHPLATMFGLLTTVDQVVIS-CTLWEAQVCTGYLCTGVPLLYIP 124
           C +S    NLM   + V    T+F +   VD +       WE Q+C G    G     +P
Sbjct: 174 CGKSQLLRNLMSAQLIVPTPETVFFITPQVDMIPPQEIAAWETQICEGNFLAGPENTVVP 233

Query: 123 FSSSYFAKRVNFRW 82
            S S   + +   +
Sbjct: 234 QSGSIMPRFIQMSY 247

>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic|
           protein 2d) (PIP2d)
          Length = 286

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 255 HVHPLATMFGLLTTVDQVVISCTLWEAQVCTGYLCTGVPLLYIPFSSSYFAK 100
           H++P  T FGLL      ++   ++    C G +C GV L+   F S+YF +
Sbjct: 104 HINPAVT-FGLLLARKVTLVRAVMYMVAQCLGAIC-GVALVK-AFQSAYFTR 152

>GTHB2_TRITC (Q9PW98) Gonadotropin beta-2 subunit precursor (Gonadotropin|
           beta-II chain) (GTH-II-beta)
          Length = 146

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 192 CTLWEAQVCTGYLCTGVPLLYIPFSSSY 109
           C   E  +C+G+  T  P++ IPFS+ Y
Sbjct: 54  CHAVETTICSGHCLTKDPIIKIPFSNVY 81

>LAP1_CAEEL (O61967) Protein lap1 (Protein lethal-413)|
          Length = 699

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 220 K*PKHCS*RVDMHRFEHEIQKPQTLQTFSGRR 315
           K PKH    +D H   HEI +P+ L   S  R
Sbjct: 479 KTPKHKKGSIDGHMLPHEIDQPRQLSLVSNHR 510

>DYHG_CHLRE (Q39575) Dynein gamma chain, flagellar outer arm|
          Length = 4485

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 55   ININMYSECPPKIHTLCKITRRKRNIQQWHSGTQVS 162
            IN+++ S C  +++ +C+   RK++  Q+  GT VS
Sbjct: 1876 INLDVLSVCAQQVYCICRTRERKKSF-QFTDGTTVS 1910


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,666,757
Number of Sequences: 219361
Number of extensions: 1359977
Number of successful extensions: 3175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3175
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)