ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AOR_PYRAB (Q9V035) Tungsten-containing aldehyde ferredoxin oxido... 29 5.8
2AOR_PYRHO (O58778) Tungsten-containing aldehyde ferredoxin oxido... 28 7.6

>AOR_PYRAB (Q9V035) Tungsten-containing aldehyde ferredoxin oxidoreductase (EC|
           1.2.7.5)
          Length = 607

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = -1

Query: 422 QASFEAVSSSILIQCQRCFSSPVKCGITLFAVHL*ELKL*EPMF*RSWAVHVNI 261
           + S EA+++  LI+ + CF+ P+ CG   +   + E +   P +  +WA+  N+
Sbjct: 271 EQSGEAMAAKYLIRNKPCFACPIGCGRVNYLPSIGETE--GPEYESTWALGANL 322



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>AOR_PYRHO (O58778) Tungsten-containing aldehyde ferredoxin oxidoreductase (EC|
           1.2.7.5)
          Length = 607

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = -1

Query: 422 QASFEAVSSSILIQCQRCFSSPVKCGITLFAVHL*ELKL*EPMF*RSWAVHVNI 261
           + S EA+++  L++ + CF+ P+ CG   +   + E +   P +  +WA+  N+
Sbjct: 271 EQSGEAMAAKYLVRNKPCFACPIGCGRVNYLPSIGETE--GPEYESTWALGANL 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,223,268
Number of Sequences: 219361
Number of extensions: 1228516
Number of successful extensions: 2333
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2333
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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