Clone Name | rbastl45c06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | S29A1_HUMAN (Q99808) Equilibrative nucleoside transporter 1 (Equ... | 33 | 0.28 | 2 | JMJ2_SCHPO (Q9US53) Jumonji/ARID domain-containing protein 2 | 29 | 5.2 |
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>S29A1_HUMAN (Q99808) Equilibrative nucleoside transporter 1 (Equilibrative| nitrobenzylmercaptopurine riboside-sensitive nucleoside transporter) (Equilibrative NBMPR-sensitive nucleoside transporter) (Nucleoside transporter, es-type) (Solute carrier famil Length = 455 Score = 33.5 bits (75), Expect = 0.28 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = -1 Query: 260 SLLLERCFSSLDIL*MCHVPPRYPLIFIVEHWKWKHCHLFIFFGLTLCFSQGITG--CVC 87 SL+L R + +L +C++ PR L + EH W FIFF FS G C+C Sbjct: 362 SLVLARLVF-VPLLLLCNIKPRRYLTVVFEHDAW-----FIFFMAAFAFSNGYLASLCMC 415 Query: 86 WDGKPV 69 + K V Sbjct: 416 FGPKKV 421
>JMJ2_SCHPO (Q9US53) Jumonji/ARID domain-containing protein 2| Length = 715 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -1 Query: 173 EHWKWKHCHLFIFFGLTLCFSQGITGC 93 E+W+ +HC F +F C + IT C Sbjct: 657 ENWQCQHCKAFSYFSQVACSCKSITVC 683 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,975,708 Number of Sequences: 219361 Number of extensions: 1693861 Number of successful extensions: 3597 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3523 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3596 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)